Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0317 Selaginella moellendorffii HOM05D019449 ORTHO05D021271 3.6e-210 734.6 342 100.0
AagrBONN_evm.TU.Sc2ySwM_117.3061 Anthoceros agrestis HOM05D019449 ORTHO05D021271 3.0e-156 555.4 334 74.9
Mapoly0079s0039 Marchantia polymorpha HOM05D019449 ORTHO05D021271 1.6e-149 533.1 331 72.8
Pp3c27_7750 Physcomitrium patens HOM05D019449 ORTHO05D021271 4.7e-146 521.5 333 69.7
Cre02.g105400 Chlamydomonas reinhardtii HOM05D019449 ORTHO05D021271 5.3e-113 411.8 326 56.4
PRCOL_00003601 Prasinoderma coloniale HOM05D019449 ORTHO05D021271 5.5e-86 322.0 272 54.8
PGSC0003DMG400004324 Solanum tuberosum HOM05D001866 ORTHO05D001915 9.3e-09 65.5 112 33.9
CAN.G402.8 Capsicum annuum HOM05D001866 ORTHO05D001915 2.7e-08 63.9 207 28.5
Nitab4.5_0000210g0040 Nicotiana tabacum HOM05D001866 ORTHO05D001915 3.5e-08 63.5 109 34.9
Peaxi162Scf00001g00603 Petunia axillaris HOM05D001866 ORTHO05D001915 7.8e-08 62.4 112 33.0
Prupe.7G217100 Prunus persica HOM05D001866 ORTHO05D001915 7.8e-08 62.4 120 32.5
CiPaw.04G154600 Carya illinoinensis HOM05D001866 ORTHO05D001915 1.0e-07 62.0 134 30.6
MD02G1068600 Malus domestica HOM05D001866 ORTHO05D001915 1.0e-07 62.0 134 30.6
Manes.16G106900 Manihot esculenta HOM05D001866 ORTHO05D001915 1.0e-07 62.0 134 30.6
Solyc10g039280.2 Solanum lycopersicum HOM05D001866 ORTHO05D001915 1.0e-07 62.0 116 32.8
Sopen10g012150 Solanum pennellii HOM05D001866 ORTHO05D001915 1.3e-07 61.6 112 33.0
Os05g0524200 Oryza sativa ssp. japonica HOM05D001866 ORTHO05D001915 1.7e-07 61.2 116 32.8
PGR102G2991 Punica granatum HOM05D001866 ORTHO05D001915 1.7e-07 61.2 134 29.9
CANSAT56G0586 Cannabis sativa HOM05D001866 ORTHO05D001915 2.3e-07 60.8 134 30.6
COL.COLO4_18278 Corchorus olitorius HOM05D001866 ORTHO05D001915 2.3e-07 60.8 134 29.9
FAN26G2111 Fragaria x ananassa HOM05D001866 ORTHO05D001915 2.3e-07 60.8 134 30.6
FAN26G2214 Fragaria x ananassa HOM05D001866 ORTHO05D001915 2.3e-07 60.8 134 30.6
FvH4_1g06520 Fragaria vesca HOM05D001866 ORTHO05D001915 3.0e-07 60.5 134 30.6
FAN19G2298 Fragaria x ananassa HOM05D001866 ORTHO05D001915 3.0e-07 60.5 134 30.6
RcHm_v2.0_Chr2g0092271 Rosa chinensis HOM05D001866 ORTHO05D001915 3.0e-07 60.5 134 30.6
unitig_0.g1325 Utricularia gibba HOM05D001866 ORTHO05D001915 3.0e-07 60.5 136 31.6
FAN28G2280 Fragaria x ananassa HOM05D001866 ORTHO05D001915 3.9e-07 60.1 134 30.6
CBR_g54335 Chara braunii HOM05D038878 ORTHO05D034303 5.1e-07 59.7 166 27.7
HPP92_011537 Vanilla planifolia HOM05D001866 ORTHO05D001915 5.1e-07 59.7 114 28.9
arahy.Tifrunner.gnm1.ann1.JV2KD9 Arachis hypogaea HOM05D001866 ORTHO05D001915 6.6e-07 59.3 135 30.4
arahy.Tifrunner.gnm1.ann1.SGJW3X Arachis hypogaea HOM05D001866 ORTHO05D001915 6.6e-07 59.3 135 30.4
Carub.0001s0014 Capsella rubella HOM05D001866 ORTHO05D001915 6.6e-07 59.3 131 30.5
CBR_g9011 Chara braunii HOM05D001866 ORTHO05D001915 1.5e-06 58.2 120 29.2
ATR0705G038 Amborella trichopoda HOM05D001866 ORTHO05D001915 1.9e-06 57.8 120 29.2
Prupe.5G063900 Prunus persica HOM05D001866 ORTHO05D001915 1.9e-06 57.8 112 32.1
Zm00001eb293560 Zea mays HOM05D001866 ORTHO05D001915 1.9e-06 57.8 112 33.0
CiPaw.12G049300 Carya illinoinensis HOM05D001866 ORTHO05D001915 2.5e-06 57.4 112 31.2
PSO210G4444 Papaver somniferum HOM05D001866 ORTHO05D001915 2.5e-06 57.4 131 27.5
Cc06_g10720 Coffea canephora HOM05D001866 ORTHO05D001915 3.3e-06 57.0 134 29.9
Phvul.002G015700 Phaseolus vulgaris HOM05D001596 ORTHO05D002857 3.3e-06 57.0 191 26.2
Sabra07G0042900 Salix brachista HOM05D001596 ORTHO05D002857 3.3e-06 57.0 150 31.3
VMungo0251G0202 Vigna mungo HOM05D001866 ORTHO05D001915 3.3e-06 57.0 120 30.0
Phvul.003G223400 Phaseolus vulgaris HOM05D001866 ORTHO05D001915 4.3e-06 56.6 116 29.3
Potri.007G047900 Populus trichocarpa HOM05D001596 ORTHO05D002857 4.3e-06 56.6 150 31.3
Cfa004055 Carpinus fangiana HOM05D001596 ORTHO05D002857 5.6e-06 56.2 150 30.0
FvH4_1g16580 Fragaria vesca HOM05D001596 ORTHO05D002857 5.6e-06 56.2 144 29.9
FAN23G0886 Fragaria x ananassa HOM05D001596 ORTHO05D002857 5.6e-06 56.2 144 29.9
RcHm_v2.0_Chr2g0106491 Rosa chinensis HOM05D001596 ORTHO05D002857 5.6e-06 56.2 144 29.9
BcaC06g33109 Brassica carinata HOM05D001596 ORTHO05D002857 7.3e-06 55.8 149 29.5
SMO329G0011 Selaginella moellendorffii HOM05D001866 ORTHO05D001915 7.3e-06 55.8 116 31.9
SEGI_09889 Sequoiadendron giganteum HOM05D001866 ORTHO05D001915 7.3e-06 55.8 134 28.4
vmacro00016 Vaccinium macrocarpon HOM05D001866 ORTHO05D001915 7.3e-06 55.8 116 27.6
vmacro23318 Vaccinium macrocarpon HOM05D001866 ORTHO05D001915 7.3e-06 55.8 116 27.6
MBI04_g07002_MAGBIO Magnolia biondii HOM05D001866 ORTHO05D001915 9.6e-06 55.5 131 28.2
Sp1g00200 Schrenkiella parvula HOM05D001866 ORTHO05D001915 9.6e-06 55.5 132 28.8
THA.LOC104827383 Tarenaya hassleriana HOM05D001596 ORTHO05D002857 9.6e-06 55.5 149 30.2


User provided reference genes

Program Settings