Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0291 Selaginella moellendorffii HOM05D003858 ORTHO05D005878 4.4e-241 837.8 503 100.0
SEGI_19941 Sequoiadendron giganteum HOM05D003858 ORTHO05D005878 2.2e-155 553.1 421 66.0
TAR371G0204 Trochodendron aralioides HOM05D003858 ORTHO05D005878 1.7e-152 543.5 417 65.7
CDE05G2345 Ceratophyllum demersum HOM05D003858 ORTHO05D005878 2.2e-152 543.1 507 58.0
CSS0032323 Camellia sinensis var. sinensis HOM05D003858 ORTHO05D005878 2.9e-152 542.7 419 65.4
Cpa.g.sc250.13 Carica papaya HOM05D003858 ORTHO05D005878 2.9e-152 542.7 423 64.5
Rhsim12G0174400 Rhododendron simsii HOM05D003858 ORTHO05D005878 7.2e-151 538.1 418 65.1
PGSC0003DMG400012349 Solanum tuberosum HOM05D003858 ORTHO05D005878 7.2e-151 538.1 434 63.4
CANSAT80G0729 Cannabis sativa HOM05D003858 ORTHO05D005878 9.4e-151 537.7 418 65.1
Rhsim10G0051500 Rhododendron simsii HOM05D003858 ORTHO05D005878 1.6e-150 537.0 418 65.1
Actinidia08869 Actinidia chinensis HOM05D003858 ORTHO05D005878 2.1e-150 536.6 419 64.7
Manes.06G119400 Manihot esculenta HOM05D003858 ORTHO05D005878 2.7e-150 536.2 437 62.9
Nn4g22329 Nelumbo nucifera HOM05D003858 ORTHO05D005878 2.7e-150 536.2 431 63.1
Duzib205G0757 Durio zibethinus HOM05D003858 ORTHO05D005878 3.6e-150 535.8 437 62.0
Nitab4.5_0005642g0040 Nicotiana tabacum HOM05D003858 ORTHO05D005878 7.9e-150 534.6 418 64.4
Nitab4.5_0006042g0010 Nicotiana tabacum HOM05D003858 ORTHO05D005878 1.0e-149 534.3 434 63.1
Thecc.03G129000 Theobroma cacao HOM05D003858 ORTHO05D005878 1.4e-149 533.9 436 61.9
ATR0559G302 Amborella trichopoda HOM05D003858 ORTHO05D005878 1.8e-149 533.5 519 64.0
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 1.8e-149 533.5 427 63.9
COL.COLO4_28121 Corchorus olitorius HOM05D003858 ORTHO05D005878 2.3e-149 533.1 438 62.6
Dinv23145 Davidia involucrata HOM05D003858 ORTHO05D005878 2.3e-149 533.1 419 64.7
Gohir.D03G114300 Gossypium hirsutum HOM05D003858 ORTHO05D005878 3.0e-149 532.7 437 62.2
Gorai.003G120600 Gossypium raimondii HOM05D003858 ORTHO05D005878 3.0e-149 532.7 437 62.2
Gohir.A03G052800 Gossypium hirsutum HOM05D003858 ORTHO05D005878 6.7e-149 531.6 437 62.2
Sopen08g029150 Solanum pennellii HOM05D003858 ORTHO05D005878 6.7e-149 531.6 441 61.2
Solyc08g080850.4 Solanum lycopersicum HOM05D003858 ORTHO05D005878 8.8e-149 531.2 432 62.7
SGA_v2.0_scaffold2G01192 Striga asiatica HOM05D003858 ORTHO05D005878 8.8e-149 531.2 438 62.1
SalBow6G4120 Salvia bowleyana HOM05D003858 ORTHO05D005878 1.5e-148 530.4 404 65.3
HanXRQChr02g0034711 Helianthus annuus HOM05D003858 ORTHO05D005878 2.0e-148 530.0 428 63.3
Lalb_Chr01g0021111 Lupinus albus HOM05D003858 ORTHO05D005878 2.6e-148 529.6 436 61.2
Sabra15G0116900 Salix brachista HOM05D003858 ORTHO05D005878 3.3e-148 529.3 437 61.6
vmacro16677 Vaccinium macrocarpon HOM05D003858 ORTHO05D005878 3.3e-148 529.3 420 63.6
Peaxi162Scf00119g00520 Petunia axillaris HOM05D003858 ORTHO05D005878 4.4e-148 528.9 434 62.7
Migut.N03254 Erythranthe guttata HOM05D003858 ORTHO05D005878 5.7e-148 528.5 404 64.9
Potri.015G096100 Populus trichocarpa HOM05D003858 ORTHO05D005878 7.4e-148 528.1 437 61.6
SGA_v2.0_scaffold28G11963 Striga asiatica HOM05D003858 ORTHO05D005878 7.4e-148 528.1 438 61.9
TWI23G0194 Tripterygium wilfordii HOM05D003858 ORTHO05D005878 7.4e-148 528.1 418 62.9
CsaV3_1G007630 Cucumis sativus L. HOM05D003858 ORTHO05D005878 9.7e-148 527.7 416 62.7
Atru.chr9.1128 Acer truncatum HOM05D003858 ORTHO05D005878 1.7e-147 526.9 503 60.6
ECA247G4076 Erigeron canadensis HOM05D003858 ORTHO05D005878 1.7e-147 526.9 422 63.3
CAN.G774.2 Capsicum annuum HOM05D003858 ORTHO05D005878 2.2e-147 526.6 418 63.6
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 2.2e-147 526.6 437 60.4
Mapoly0084s0039 Marchantia polymorpha HOM05D003858 ORTHO05D005878 2.8e-147 526.2 425 64.5
Cc10_g13400 Coffea canephora HOM05D003858 ORTHO05D005878 3.7e-147 525.8 439 61.3
Sed0027713 Sechium edule HOM05D003858 ORTHO05D005878 3.7e-147 525.8 434 61.3
MELO3C002182.2 Cucumis melo HOM05D003858 ORTHO05D005878 4.8e-147 525.4 421 62.5
CiPaw.12G042900 Carya illinoinensis HOM05D003858 ORTHO05D005878 8.2e-147 524.6 420 63.1
AUR62028258 Chenopodium quinoa HOM05D003858 ORTHO05D005878 1.1e-146 524.2 408 64.5
CiPaw.15G056500 Carya illinoinensis HOM05D003858 ORTHO05D005878 1.4e-146 523.9 415 63.6
DCAR_001872 Daucus carota HOM05D003858 ORTHO05D005878 1.8e-146 523.5 430 61.9
arahy.Tifrunner.gnm1.ann1.L81EPG Arachis hypogaea HOM05D003858 ORTHO05D005878 9.1e-146 521.2 416 63.9
PSO478G4955 Papaver somniferum HOM05D003858 ORTHO05D005878 9.1e-146 521.2 430 61.4
Phvul.008G067600 Phaseolus vulgaris HOM05D003858 ORTHO05D005878 9.1e-146 521.2 423 63.6
Glyma.09G261800 Glycine max HOM05D003858 ORTHO05D005878 1.2e-145 520.8 402 65.7
Hma1.2p1_0014F.1_g009460 Hydrangea macrophylla HOM05D003858 ORTHO05D005878 1.2e-145 520.8 404 65.3
PSO017G3328 Papaver somniferum HOM05D003858 ORTHO05D005878 1.2e-145 520.8 430 61.4
arahy.Tifrunner.gnm1.ann1.LEEI49 Arachis hypogaea HOM05D003858 ORTHO05D005878 1.5e-145 520.4 416 63.9
Glyma.18G230300 Glycine max HOM05D003858 ORTHO05D005878 1.5e-145 520.4 424 63.7
TPR.G2433 Trifolium pratense HOM05D003858 ORTHO05D005878 1.5e-145 520.4 432 62.5
PGR004G1062 Punica granatum HOM05D003858 ORTHO05D005878 5.9e-145 518.5 401 64.1
Oeu001550.1 Olea europaea HOM05D003858 ORTHO05D005878 1.0e-144 517.7 430 60.9
Haze_09759 Corylus avellana HOM05D003858 ORTHO05D005878 2.2e-144 516.5 509 56.2
Lsat_1_v5_gn_1_28960 Lactuca sativa HOM05D003858 ORTHO05D005878 2.2e-144 516.5 426 61.0
MD14G1157300 Malus domestica HOM05D003858 ORTHO05D005878 2.2e-144 516.5 418 63.6
EL10Ac9g21903 Beta vulgaris HOM05D003858 ORTHO05D005878 6.5e-144 515.0 405 64.2
Hund02439 Selenicereus undatus HOM05D003858 ORTHO05D005878 2.5e-143 513.1 429 60.8
FAN08G1590 Fragaria x ananassa HOM05D003858 ORTHO05D005878 3.2e-143 512.7 427 62.5
FvH4_5g08310 Fragaria vesca HOM05D003858 ORTHO05D005878 4.2e-143 512.3 426 63.1
Prupe.5G151200 Prunus persica HOM05D003858 ORTHO05D005878 5.5e-143 511.9 427 61.4
RcHm_v2.0_Chr7g0190211 Rosa chinensis HOM05D003858 ORTHO05D005878 3.6e-142 509.2 427 62.1
Sc10g0010460 Simmondsia chinensis HOM05D003858 ORTHO05D005878 1.0e-141 507.7 437 59.7
Haze_07135 Corylus avellana HOM05D003858 ORTHO05D005878 1.8e-141 506.9 414 61.6
Eucgr.E01497 Eucalyptus grandis HOM05D003858 ORTHO05D005878 2.3e-141 506.5 404 63.1
QL10p002959 Quercus lobata HOM05D003858 ORTHO05D005878 5.2e-141 505.4 429 61.5
Aqoxy3G00800 Aquilegia oxysepala HOM05D003858 ORTHO05D005878 6.7e-141 505.0 432 62.0
Lj1g0027711 Lotus japonicus HOM05D003858 ORTHO05D005878 1.1e-140 504.2 437 60.6
Cfa015653 Carpinus fangiana HOM05D003858 ORTHO05D005878 2.6e-140 503.1 502 55.2
VMungo1383G3568 Vigna mungo HOM05D003858 ORTHO05D005878 2.6e-140 503.1 410 63.2
Ah.01g020640 Amaranthus hybridus HOM05D003858 ORTHO05D005878 1.7e-139 500.4 446 58.5
BcaB06g28028 Brassica carinata HOM05D003858 ORTHO05D005878 2.2e-139 500.0 405 63.2
BcaC02g08384 Brassica carinata HOM05D003858 ORTHO05D005878 4.8e-139 498.8 405 63.0
A04p19370 Brassica napus HOM05D003858 ORTHO05D005878 4.8e-139 498.8 417 61.4
C04p54940 Brassica napus HOM05D003858 ORTHO05D005878 4.8e-139 498.8 405 63.0
Sp4g03970 Schrenkiella parvula HOM05D003858 ORTHO05D005878 4.8e-139 498.8 418 60.5
Thhalv10000120m.g Eutrema salsugineum HOM05D003858 ORTHO05D005878 6.3e-139 498.4 418 61.0
BraA04t17533Z Brassica rapa HOM05D003858 ORTHO05D005878 8.2e-139 498.0 416 61.5
Lj5C96T4 Lonicera japonica HOM05D003858 ORTHO05D005878 8.2e-139 498.0 404 62.4
Aa31sc86G50 Aethionema arabicum HOM05D003858 ORTHO05D005878 1.4e-138 497.3 402 62.9
DCAR_021618 Daucus carota HOM05D003858 ORTHO05D005878 3.1e-138 496.1 468 56.0
THA.LOC104800505 Tarenaya hassleriana HOM05D003858 ORTHO05D005878 4.1e-138 495.7 419 61.8
AL4G16080 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 2.0e-137 493.4 407 61.7
CARHR116740 Cardamine hirsuta HOM05D003858 ORTHO05D005878 1.3e-136 490.7 405 62.2
AT5G37350 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 2.2e-136 490.0 405 61.7
BolC4t27030H Brassica oleracea HOM05D003858 ORTHO05D005878 3.8e-136 489.2 417 60.9
AT2G24990 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 6.5e-136 488.4 407 60.9
Pp3c21_1450 Physcomitrium patens HOM05D003858 ORTHO05D005878 8.5e-136 488.0 416 66.8
Carub.0004s0455 Capsella rubella HOM05D003858 ORTHO05D005878 3.2e-135 486.1 425 59.5
HPP92_020969 Vanilla planifolia HOM05D003858 ORTHO05D005878 4.2e-135 485.7 342 70.2
MBI07_g31017_MAGBIO Magnolia biondii HOM05D003858 ORTHO05D005878 9.4e-135 484.6 376 64.9
Medtr7g090710 Medicago truncatula HOM05D003858 ORTHO05D005878 1.6e-134 483.8 438 58.4
Zm00001eb256840 Zea mays HOM05D003858 ORTHO05D005878 4.7e-134 482.3 429 59.2
Zm00001eb103140 Zea mays HOM05D003858 ORTHO05D005878 2.3e-133 479.9 438 58.2
PSO170G6136 Papaver somniferum HOM05D003858 ORTHO05D005878 2.6e-132 476.5 501 53.9
AUR62003032 Chenopodium quinoa HOM05D003858 ORTHO05D005878 4.4e-132 475.7 380 63.9
SalBow7G4372 Salvia bowleyana HOM05D003858 ORTHO05D005878 1.1e-130 471.1 423 59.1
Os07g0162300 Oryza sativa ssp. japonica HOM05D003858 ORTHO05D005878 2.4e-130 469.9 342 67.8
VMungo1383G2243 Vigna mungo HOM05D003858 ORTHO05D005878 1.1e-127 461.1 408 59.1
FAN04G1110 Fragaria x ananassa HOM05D003858 ORTHO05D005878 1.8e-125 453.8 426 58.0
FAN18G4532 Fragaria x ananassa HOM05D003858 ORTHO05D005878 6.8e-125 451.8 426 58.0
Aa31LG8G17300 Aethionema arabicum HOM05D003858 ORTHO05D005878 1.5e-124 450.7 399 58.9
TAR629G0830 Trochodendron aralioides HOM05D003858 ORTHO05D005878 2.6e-124 449.9 390 61.8
TPR.G23280 Trifolium pratense HOM05D003858 ORTHO05D005878 3.4e-124 449.5 366 62.6
Psat3g110800 Pisum sativum HOM05D003858 ORTHO05D005878 2.2e-123 446.8 501 55.7
AL7G45930 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 2.4e-122 443.4 405 58.3
RcHm_v2.0_Chr5g0020401 Rosa chinensis HOM05D003858 ORTHO05D005878 9.1e-122 441.4 433 54.3
AagrBONN_evm.TU.Sc2ySwM_228.678 Anthoceros agrestis HOM05D003858 ORTHO05D005878 1.3e-120 437.6 434 55.5
unitig_21.g20184 Utricularia gibba HOM05D003858 ORTHO05D005878 1.9e-119 433.7 403 55.6
AUR62007839 Chenopodium quinoa HOM05D003858 ORTHO05D005878 1.4e-117 427.6 378 59.5
Ca_07893_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 2.4e-114 416.8 401 54.9
Cre13.g580900 Chlamydomonas reinhardtii HOM05D003858 ORTHO05D005878 3.1e-114 416.4 432 51.2
ClCG01G014690 Citrullus lanatus HOM05D003858 ORTHO05D005878 1.6e-113 414.1 434 51.4
FAN16G2509 Fragaria x ananassa HOM05D003858 ORTHO05D005878 3.0e-109 399.8 502 48.2
FvH4_5g16770 Fragaria vesca HOM05D003858 ORTHO05D005878 5.2e-109 399.1 502 48.2
PSO423G0213 Papaver somniferum HOM05D003858 ORTHO05D005878 6.4e-107 392.1 342 58.2
PSO724G1315 Papaver somniferum HOM05D003858 ORTHO05D005878 6.4e-107 392.1 342 58.5
PRCOL_00003781 Prasinoderma coloniale HOM05D003858 ORTHO05D005878 3.2e-106 389.8 420 51.2
Medtr7g012400 Medicago truncatula HOM05D003858 ORTHO05D005878 4.3e-103 379.4 338 58.0
MCO12G200 Micromonas commoda HOM05D003858 ORTHO05D005878 4.3e-103 379.4 371 54.2
Medtr7g076710 Medicago truncatula HOM05D003858 ORTHO05D005878 5.6e-103 379.0 408 50.0
PSO170G3101 Papaver somniferum HOM05D003858 ORTHO05D005878 7.5e-100 368.6 345 55.7
PSO724G1140 Papaver somniferum HOM05D003858 ORTHO05D005878 1.9e-98 364.0 326 57.4
MD06G1142000 Malus domestica HOM05D003858 ORTHO05D005878 7.0e-98 362.1 401 50.9
PSO724G0964 Papaver somniferum HOM05D003858 ORTHO05D005878 1.6e-97 360.9 369 53.1
FAN20G1682 Fragaria x ananassa HOM05D003858 ORTHO05D005878 8.6e-96 355.1 517 43.3
Lj7A12G16 Lonicera japonica HOM05D003858 ORTHO05D005878 1.5e-95 354.4 452 45.1
CBR_g61467 Chara braunii HOM05D003858 ORTHO05D005878 1.5e-92 344.4 299 59.2
Lj7A11G39 Lonicera japonica HOM05D003858 ORTHO05D005878 1.5e-92 344.4 432 46.1
TPR.G21069 Trifolium pratense HOM05D003858 ORTHO05D005878 4.6e-89 332.8 436 45.6
SHI21468 Sapria himalayana HOM05D003858 ORTHO05D005878 2.6e-84 317.0 594 36.0
Ca_28300_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 1.3e-83 314.7 215 68.4
Haze_27048 Corylus avellana HOM05D003858 ORTHO05D005878 1.3e-80 304.7 405 44.0
RcHm_v2.0_Chr5g0063241 Rosa chinensis HOM05D003858 ORTHO05D005878 2.5e-79 300.4 410 44.1
PSO063G1302 Papaver somniferum HOM05D003858 ORTHO05D005878 5.6e-79 299.3 270 56.7
Cfa023770 Carpinus fangiana HOM05D003858 ORTHO05D005878 9.0e-77 292.0 348 45.7
Zm00001eb256780 Zea mays HOM05D003858 ORTHO05D005878 6.4e-75 285.8 217 66.8
DCAR_029022 Daucus carota HOM05D003858 ORTHO05D005878 9.3e-74 282.0 258 55.8
SHI21367 Sapria himalayana HOM05D003858 ORTHO05D005878 2.6e-68 263.8 473 35.9
RcHm_v2.0_Chr5g0063291 Rosa chinensis HOM05D003858 ORTHO05D005878 7.6e-68 262.3 356 42.7
CDE05G1919 Ceratophyllum demersum HOM05D003858 ORTHO05D015239 9.9e-60 235.3 288 50.7
PSO421G0376 Papaver somniferum HOM05D003858 ORTHO05D015239 1.3e-54 218.4 184 58.2
arahy.Tifrunner.gnm1.ann1.RIH0QL Arachis hypogaea HOM05D003858 ORTHO05D015239 6.0e-49 199.5 169 59.8
Actinidia36803 Actinidia chinensis HOM05D003858 ORTHO05D015239 4.8e-46 189.9 152 61.8
Cc10_g13370 Coffea canephora HOM05D003858 ORTHO05D015239 2.6e-36 157.5 98 69.4
FAN13G2455 Fragaria x ananassa HOM05D003858 ORTHO05D015239 7.7e-28 129.4 100 63.0
Actinidia36804 Actinidia chinensis HOM05D003858 ORTHO05D005878 2.2e-22 111.3 266 33.5
FAN08G1067 Fragaria x ananassa HOM05D003858 ORTHO05D015239 6.3e-22 109.8 206 36.9
CBR_g61468 Chara braunii HOM05D003858 ORTHO05D131775 1.7e-19 101.7 122 51.6
AUR62028260 Chenopodium quinoa HOM05D008347 ORTHO05D006373 2.9e-19 100.9 93 58.1
PSO675G5360 Papaver somniferum HOM05D003858 ORTHO05D015239 3.2e-18 97.4 72 63.9
Medtr6g024025 Medicago truncatula HOM05D003858 ORTHO05D267118 5.5e-18 96.7 121 44.6
FvH4_5g25261 Fragaria vesca HOM05D003858 ORTHO05D015239 1.4e-16 92.0 74 63.5
TAR625G0709 Trochodendron aralioides HOM05D003858 ORTHO05D015239 3.3e-15 87.4 45 84.4
Zm00001eb256800 Zea mays HOM05D003858 ORTHO05D033539 8.3e-14 82.8 79 55.7
FAN08G1033 Fragaria x ananassa HOM05D003858 ORTHO05D005878 5.3e-13 80.1 50 72.0
FAN21G1362 Fragaria x ananassa HOM05D003858 ORTHO05D207154 7.7e-12 76.3 185 29.7
COL.COLO4_09285 Corchorus olitorius HOM05D003858 ORTHO05D155188 4.2e-10 70.5 47 74.5
C08p38970 Brassica napus HOM05D003858 ORTHO05D033539 3.6e-09 67.4 70 50.0
BolC8t51471H Brassica oleracea HOM05D003858 ORTHO05D033539 1.8e-08 65.1 77 45.5
FvH4_3g12461 Fragaria vesca HOM05D000004 ORTHO05D000002 2.3e-08 64.7 141 32.6
BcaC07g40899 Brassica carinata HOM05D003858 ORTHO05D015239 2.6e-07 61.2 78 42.3
HanXRQChr13g0426321 Helianthus annuus HOM05D003858 ORTHO05D000008 2.6e-07 61.2 46 56.5
BolC8t51470H Brassica oleracea HOM05D003858 ORTHO05D015239 9.8e-07 59.3 31 83.9
Zm00001eb256810 Zea mays HOM05D003858 ORTHO05D005878 3.7e-06 57.4 143 32.9


User provided reference genes

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