Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0286 Selaginella moellendorffii HOM05D027650 ORTHO05D000571 1.3e-235 819.3 405 100.0
SMO117G0128 Selaginella moellendorffii HOM05D027650 ORTHO05D000571 8.2e-97 358.2 187 95.2
SMO117G0039 Selaginella moellendorffii HOM05D027650 ORTHO05D000571 7.7e-71 271.9 181 78.5
SMO117G0146 Selaginella moellendorffii HOM05D027650 ORTHO05D000571 3.2e-69 266.5 182 77.5
DCAR_028900 Daucus carota HOM05D000782 ORTHO05D000571 3.9e-14 83.6 198 31.3
DCAR_028905 Daucus carota HOM05D000782 ORTHO05D000571 5.6e-13 79.7 189 30.2
DCAR_015455 Daucus carota HOM05D000782 ORTHO05D000571 7.3e-13 79.3 189 30.2
SGA_v2.0_scaffold373G50167 Striga asiatica HOM05D000782 ORTHO05D000571 1.3e-12 78.6 191 29.3
PSO017G2627 Papaver somniferum HOM05D000782 ORTHO05D000571 2.8e-12 77.4 186 30.6
PSO170G5746 Papaver somniferum HOM05D000782 ORTHO05D000571 3.6e-12 77.0 186 30.1
Cc06_g00620 Coffea canephora HOM05D000782 ORTHO05D000571 4.8e-12 76.6 191 28.8
vmacro20342 Vaccinium macrocarpon HOM05D000782 ORTHO05D000571 1.1e-11 75.5 192 27.6
Rhsim05G0227600 Rhododendron simsii HOM05D000782 ORTHO05D000571 1.4e-11 75.1 186 28.0
TAR623G1291 Trochodendron aralioides HOM05D000782 ORTHO05D000571 1.4e-11 75.1 186 28.0
TAR623G1064 Trochodendron aralioides HOM05D000782 ORTHO05D000571 1.8e-11 74.7 186 27.4
Phvul.008G089000 Phaseolus vulgaris HOM05D000782 ORTHO05D000571 3.1e-11 73.9 193 28.5
vmacro20341 Vaccinium macrocarpon HOM05D000782 ORTHO05D000571 4.0e-11 73.6 187 29.9
Actinidia29055 Actinidia chinensis HOM05D000782 ORTHO05D000571 6.9e-11 72.8 188 27.7
Dinv35438 Davidia involucrata HOM05D000782 ORTHO05D000571 9.0e-11 72.4 188 26.6
Lalb_Chr03g0043661 Lupinus albus HOM05D000782 ORTHO05D000571 9.0e-11 72.4 187 27.3
RcHm_v2.0_Chr3g0461181 Rosa chinensis HOM05D000782 ORTHO05D000571 9.0e-11 72.4 197 26.9
PGSC0003DMG400017031 Solanum tuberosum HOM05D000782 ORTHO05D000571 1.2e-10 72.0 194 29.4
Sopen09g007690 Solanum pennellii HOM05D000782 ORTHO05D000571 2.6e-10 70.9 194 29.4
CAN.G738.2 Capsicum annuum HOM05D000782 ORTHO05D000571 5.8e-10 69.7 193 26.4
Migut.J00079 Erythranthe guttata HOM05D000782 ORTHO05D000571 5.8e-10 69.7 193 24.4
Hma1.2p1_0174F.1_g077070 Hydrangea macrophylla HOM05D000782 ORTHO05D000571 5.8e-10 69.7 186 28.5
Medtr7g072120 Medicago truncatula HOM05D000782 ORTHO05D000571 5.8e-10 69.7 186 26.9
Ca_08083_v3 Cicer arietinum L. HOM05D000072 ORTHO05D000571 7.6e-10 69.3 186 27.4
Lj1g0027513 Lotus japonicus HOM05D000782 ORTHO05D000571 7.6e-10 69.3 193 26.4
Peaxi162Scf00009g00813 Petunia axillaris HOM05D000782 ORTHO05D000571 7.6e-10 69.3 193 27.5
Psat3g121480 Pisum sativum HOM05D000782 ORTHO05D000571 7.6e-10 69.3 186 26.9
VMungo0925G0001 Vigna mungo HOM05D000782 ORTHO05D000571 7.6e-10 69.3 193 25.9
Dinv25291 Davidia involucrata HOM05D000782 ORTHO05D000571 9.9e-10 68.9 189 26.5
Eucgr.K01265 Eucalyptus grandis HOM05D000782 ORTHO05D000571 9.9e-10 68.9 189 25.9
MBI15_g13922_MAGBIO Magnolia biondii HOM05D000782 ORTHO05D000571 9.9e-10 68.9 152 31.6
MBI15_g43140_MAGBIO Magnolia biondii HOM05D000782 ORTHO05D000571 9.9e-10 68.9 152 31.6
Os03g0179700 Oryza sativa ssp. japonica HOM05D005533 ORTHO05D006700 9.9e-10 68.9 191 33.0
Psat1g155400 Pisum sativum HOM05D000782 ORTHO05D000571 1.3e-09 68.6 190 27.9
Solyc10g085420.3 Solanum lycopersicum HOM05D000782 ORTHO05D000571 1.3e-09 68.6 186 26.3
Sopen10g034870 Solanum pennellii HOM05D000782 ORTHO05D000571 1.3e-09 68.6 186 26.3
PGSC0003DMG400011039 Solanum tuberosum HOM05D000782 ORTHO05D000571 1.3e-09 68.6 186 26.9
Glyma.18G209800 Glycine max HOM05D000782 ORTHO05D000571 1.7e-09 68.2 186 26.3
Nitab4.5_0004057g0010 Nicotiana tabacum HOM05D000782 ORTHO05D000571 2.2e-09 67.8 192 26.6
Ca_07723_v3 Cicer arietinum L. HOM05D000782 ORTHO05D000571 2.9e-09 67.4 186 26.3
FAN09G0140 Fragaria x ananassa HOM05D000782 ORTHO05D000571 2.9e-09 67.4 186 25.8
Zm00001eb401880 Zea mays HOM05D005533 ORTHO05D006700 2.9e-09 67.4 200 29.5
Glyma.09G279000 Glycine max HOM05D000782 ORTHO05D000571 3.8e-09 67.0 185 25.4
Mapoly0050s0057 Marchantia polymorpha HOM05D000782 ORTHO05D000571 3.8e-09 67.0 178 30.9
TPR.G35292 Trifolium pratense HOM05D000782 ORTHO05D000571 3.8e-09 67.0 191 27.7
Peaxi162Scf00009g00812 Petunia axillaris HOM05D000782 ORTHO05D000571 4.9e-09 66.6 204 26.0
Nn2g11070 Nelumbo nucifera HOM05D000782 ORTHO05D000571 6.4e-09 66.2 189 31.2
PSO170G1081 Papaver somniferum HOM05D000782 ORTHO05D000571 6.4e-09 66.2 182 27.5
Psat0s4838g0040 Pisum sativum HOM05D000782 ORTHO05D000571 6.4e-09 66.2 186 25.8
Phvul.010G061200 Phaseolus vulgaris HOM05D000782 ORTHO05D000571 1.1e-08 65.5 185 23.8
MSTRG.5525 Avicennia marina HOM05D000782 ORTHO05D000571 1.9e-08 64.7 190 25.8
CAN.G508.30 Capsicum annuum HOM05D000782 ORTHO05D000571 2.4e-08 64.3 187 28.9
FAN05G0058 Fragaria x ananassa HOM05D000782 ORTHO05D000571 2.4e-08 64.3 186 25.3
FAN05G5695 Fragaria x ananassa HOM05D000782 ORTHO05D000571 2.4e-08 64.3 186 25.3
RcHm_v2.0_Chr3g0461231 Rosa chinensis HOM05D000782 ORTHO05D000571 3.2e-08 63.9 189 28.6
Potri.006G140900 Populus trichocarpa HOM05D005533 ORTHO05D006700 4.2e-08 63.5 202 28.2
Manes.09G114200 Manihot esculenta HOM05D000782 ORTHO05D000571 5.4e-08 63.2 188 27.7
Ca_07729_v3 Cicer arietinum L. HOM05D000782 ORTHO05D000571 9.3e-08 62.4 177 26.0
ATR0598G004 Amborella trichopoda HOM05D005533 ORTHO05D006700 2.1e-07 61.2 193 26.9
Phvul.008G089200 Phaseolus vulgaris HOM05D000782 ORTHO05D000571 2.1e-07 61.2 188 25.5
DCAR_028901 Daucus carota HOM05D000782 ORTHO05D000571 2.7e-07 60.8 135 34.1
FvH4_6g10371 Fragaria vesca HOM05D000782 ORTHO05D000571 3.5e-07 60.5 194 27.3
HanXRQChr15g0463441 Helianthus annuus HOM05D000002 ORTHO05D000571 3.5e-07 60.5 152 30.9
Potri.016G131850 Populus trichocarpa HOM05D000782 ORTHO05D000571 4.6e-07 60.1 186 25.8
Lj3g0018258 Lotus japonicus HOM05D000782 ORTHO05D000571 6.0e-07 59.7 186 24.7
Peaxi162Scf00284g00121 Petunia axillaris HOM05D000782 ORTHO05D000571 6.0e-07 59.7 135 28.1
Phvul.008G219000 Phaseolus vulgaris HOM05D000782 ORTHO05D000571 1.3e-06 58.5 193 24.9
Sabra06G0110100 Salix brachista HOM05D005533 ORTHO05D006700 1.8e-06 58.2 191 26.7
SEGI_32147 Sequoiadendron giganteum HOM05D000782 ORTHO05D000571 3.0e-06 57.4 134 26.9
Solyc06g050810.3 Solanum lycopersicum HOM05D000782 ORTHO05D000571 3.9e-06 57.0 135 28.1
Sopen06g016490 Solanum pennellii HOM05D000782 ORTHO05D000571 3.9e-06 57.0 135 28.1
PGSC0003DMG400029151 Solanum tuberosum HOM05D000782 ORTHO05D000571 5.1e-06 56.6 135 28.1


User provided reference genes

Program Settings