Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0249 Selaginella moellendorffii HOM05D006979 ORTHO05D008857 1.1e-157 560.1 303 100.0
Pp3c11_2100 Physcomitrium patens HOM05D006979 ORTHO05D008857 2.6e-63 246.5 258 52.7
Sed0019772 Sechium edule HOM05D006979 ORTHO05D008857 3.6e-57 226.1 252 48.4
CsaV3_7G034520 Cucumis sativus L. HOM05D006979 ORTHO05D008857 3.1e-56 223.0 257 47.5
Atru.chr1.3953 Acer truncatum HOM05D006979 ORTHO05D008857 4.9e-54 215.7 250 43.6
Glyma.07G036000 Glycine max HOM05D006979 ORTHO05D008857 6.4e-54 215.3 262 44.3
Rhsim08G0237900 Rhododendron simsii HOM05D006979 ORTHO05D008857 8.4e-54 214.9 303 40.6
Lj3g0022239 Lotus japonicus HOM05D006979 ORTHO05D008857 1.1e-53 214.5 265 43.4
TAR383G0452 Trochodendron aralioides HOM05D006979 ORTHO05D008857 1.4e-53 214.2 255 45.9
AagrBONN_evm.TU.Sc2ySwM_362.1497 Anthoceros agrestis HOM05D006979 ORTHO05D008857 1.9e-53 213.8 229 53.7
CAN.G1368.7 Capsicum annuum HOM05D006979 ORTHO05D008857 4.2e-53 212.6 264 41.3
Cpa.g.sc25.110 Carica papaya HOM05D006979 ORTHO05D008857 1.6e-52 210.7 283 42.4
Dinv04035 Davidia involucrata HOM05D006979 ORTHO05D008857 2.1e-52 210.3 249 44.6
Migut.D00941 Erythranthe guttata HOM05D006979 ORTHO05D008857 2.1e-52 210.3 261 41.0
Lalb_Chr04g0263421 Lupinus albus HOM05D006979 ORTHO05D008857 2.1e-52 210.3 268 44.0
Os03g0410700 Oryza sativa ssp. japonica HOM05D006979 ORTHO05D008857 2.1e-52 210.3 266 43.6
FvH4_6g34590 Fragaria vesca HOM05D006979 ORTHO05D008857 3.5e-52 209.5 259 42.5
FAN09G4734 Fragaria x ananassa HOM05D006979 ORTHO05D008857 3.5e-52 209.5 259 42.5
Prupe.3G042700 Prunus persica HOM05D006979 ORTHO05D008857 3.5e-52 209.5 256 42.6
SalBow7G2243 Salvia bowleyana HOM05D006979 ORTHO05D008857 3.5e-52 209.5 262 42.4
TPR.G16442 Trifolium pratense HOM05D006979 ORTHO05D008857 4.6e-52 209.1 271 43.2
vmacro15023 Vaccinium macrocarpon HOM05D006979 ORTHO05D008857 4.6e-52 209.1 262 43.1
CSS0026622 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 6.0e-52 208.8 239 45.2
Ciclev10026147m.g Citrus clementina HOM05D006979 ORTHO05D008857 6.0e-52 208.8 255 42.7
Potri.003G063800 Populus trichocarpa HOM05D006979 ORTHO05D008857 6.0e-52 208.8 275 41.8
TWI31G0112 Tripterygium wilfordii HOM05D006979 ORTHO05D008857 6.0e-52 208.8 292 41.8
Cfa003539 Carpinus fangiana HOM05D006979 ORTHO05D008857 7.8e-52 208.4 258 43.8
CiPaw.01G219600 Carya illinoinensis HOM05D006979 ORTHO05D008857 7.8e-52 208.4 246 45.1
Eucgr.F03173 Eucalyptus grandis HOM05D006979 ORTHO05D008857 7.8e-52 208.4 257 46.3
CSS0018635 Camellia sinensis var. sinensis HOM05D006979 ORTHO05D008857 1.0e-51 208.0 242 45.9
COL.COLO4_30769 Corchorus olitorius HOM05D006979 ORTHO05D008857 1.0e-51 208.0 277 41.9
Nitab4.5_0001199g0130 Nicotiana tabacum HOM05D006979 ORTHO05D008857 1.0e-51 208.0 263 41.8
Actinidia32181 Actinidia chinensis HOM05D006979 ORTHO05D008857 1.3e-51 207.6 265 42.6
MD09G1184500 Malus domestica HOM05D006979 ORTHO05D008857 1.3e-51 207.6 253 41.1
Phvul.010G133500 Phaseolus vulgaris HOM05D006979 ORTHO05D008857 1.3e-51 207.6 265 42.3
SGA_v2.0_scaffold4G02061 Striga asiatica HOM05D006979 ORTHO05D008857 1.3e-51 207.6 259 42.5
Glyma.16G005300 Glycine max HOM05D006979 ORTHO05D008857 2.3e-51 206.8 262 43.5
Nitab4.5_0000189g0250 Nicotiana tabacum HOM05D006979 ORTHO05D008857 2.3e-51 206.8 255 42.0
PGSC0003DMG400011606 Solanum tuberosum HOM05D006979 ORTHO05D008857 3.0e-51 206.5 252 41.3
Duzib235G1224 Durio zibethinus HOM05D006979 ORTHO05D008857 3.9e-51 206.1 255 45.5
Oeu015481.1 Olea europaea HOM05D006979 ORTHO05D008857 3.9e-51 206.1 276 41.7
CDE05G0714 Ceratophyllum demersum HOM05D006979 ORTHO05D008857 6.6e-51 205.3 258 43.8
Medtr8g019510 Medicago truncatula HOM05D006979 ORTHO05D008857 8.7e-51 204.9 281 42.3
Manes.11G021300 Manihot esculenta HOM05D006979 ORTHO05D008857 1.1e-50 204.5 252 43.7
Thecc.06G118900 Theobroma cacao HOM05D006979 ORTHO05D008857 1.1e-50 204.5 288 41.0
Sabra03G0037400 Salix brachista HOM05D006979 ORTHO05D008857 1.5e-50 204.1 273 42.1
AUR62009880 Chenopodium quinoa HOM05D006979 ORTHO05D008857 1.9e-50 203.8 254 43.3
Gohir.D05G142800 Gossypium hirsutum HOM05D006979 ORTHO05D008857 1.9e-50 203.8 252 44.8
Gorai.009G146700 Gossypium raimondii HOM05D006979 ORTHO05D008857 1.9e-50 203.8 252 44.8
QL05p008051 Quercus lobata HOM05D006979 ORTHO05D008857 1.9e-50 203.8 297 40.7
ECA234G1570 Erigeron canadensis HOM05D006979 ORTHO05D008857 2.5e-50 203.4 278 39.2
PSO210G4684 Papaver somniferum HOM05D006979 ORTHO05D008857 2.5e-50 203.4 281 44.1
Sopen12g023760 Solanum pennellii HOM05D006979 ORTHO05D008857 2.5e-50 203.4 252 41.7
AUR62001490 Chenopodium quinoa HOM05D006979 ORTHO05D008857 3.3e-50 203.0 253 43.1
GSVIVG01016774001 Vitis vinifera HOM05D006979 ORTHO05D008857 3.3e-50 203.0 258 42.6
RcHm_v2.0_Chr2g0145111 Rosa chinensis HOM05D006979 ORTHO05D008857 5.6e-50 202.2 260 42.3
FAN05G0457 Fragaria x ananassa HOM05D006979 ORTHO05D008857 7.3e-50 201.8 249 43.0
PSO210G5065 Papaver somniferum HOM05D006979 ORTHO05D008857 9.6e-50 201.4 258 43.8
Solyc12g049280.3 Solanum lycopersicum HOM05D006979 ORTHO05D008857 9.6e-50 201.4 246 41.1
ATR0598G212 Amborella trichopoda HOM05D006979 ORTHO05D008857 1.6e-49 200.7 244 44.3
CANSAT56G2284 Cannabis sativa HOM05D006979 ORTHO05D008857 1.6e-49 200.7 250 42.4
MBI19_g11849_MAGBIO Magnolia biondii HOM05D006979 ORTHO05D008857 2.1e-49 200.3 258 44.6
VMungo0331G0985 Vigna mungo HOM05D006979 ORTHO05D008857 2.1e-49 200.3 277 40.8
Aqoxy5G02291 Aquilegia oxysepala HOM05D006979 ORTHO05D008857 6.2e-49 198.7 251 42.2
Lsat_1_v5_gn_5_135940 Lactuca sativa HOM05D006979 ORTHO05D008857 8.1e-49 198.4 252 42.9
THA.LOC104813956 Tarenaya hassleriana HOM05D006979 ORTHO05D008857 1.1e-48 198.0 281 44.8
ClCG09G000940 Citrullus lanatus HOM05D006979 ORTHO05D008857 1.4e-48 197.6 303 38.9
Atru.chr1.3954 Acer truncatum HOM05D006979 ORTHO05D008857 1.2e-47 194.5 237 43.5
Lj9A522T69 Lonicera japonica HOM05D006979 ORTHO05D008857 1.7e-46 190.7 230 43.5
Peaxi162Scf00177g00513 Petunia axillaris HOM05D006979 ORTHO05D008857 2.2e-46 190.3 243 40.3
Hund05741 Selenicereus undatus HOM05D006979 ORTHO05D008857 4.9e-46 189.1 316 36.4
Sc08g0005680 Simmondsia chinensis HOM05D006979 ORTHO05D008857 1.4e-45 187.6 247 41.3
unitig_8.g3563 Utricularia gibba HOM05D006979 ORTHO05D008857 2.1e-44 183.7 245 41.6
Carub.0002s1948 Capsella rubella HOM05D006979 ORTHO05D008857 2.7e-44 183.3 261 39.8
Sp5g27700 Schrenkiella parvula HOM05D006979 ORTHO05D008857 4.6e-44 182.6 305 39.3
BcaNung07150 Brassica carinata HOM05D006979 ORTHO05D008857 2.3e-43 180.3 261 39.1
Thhalv10018914m.g Eutrema salsugineum HOM05D006979 ORTHO05D008857 3.9e-43 179.5 261 42.9
Gohir.A05G140600 Gossypium hirsutum HOM05D006979 ORTHO05D008857 1.1e-42 177.9 205 46.3
AL2G32310 Arabidopsis lyrata HOM05D006979 ORTHO05D008857 1.5e-42 177.6 262 38.9
C06p46960 Brassica napus HOM05D006979 ORTHO05D008857 1.5e-42 177.6 261 40.6
BolC6t39737H Brassica oleracea HOM05D006979 ORTHO05D008857 1.5e-42 177.6 261 40.6
PGR119G0938 Punica granatum HOM05D006979 ORTHO05D008857 5.6e-42 175.6 250 38.8
BcaC08g46707 Brassica carinata HOM05D006979 ORTHO05D008857 9.6e-42 174.9 261 40.2
Cc04_g01400 Coffea canephora HOM05D006979 ORTHO05D008857 2.8e-41 173.3 237 40.9
Zm00001eb019720 Zea mays HOM05D006979 ORTHO05D008857 9.0e-40 168.3 230 43.5
Aa31LG4G3010 Aethionema arabicum HOM05D006979 ORTHO05D008857 1.2e-39 167.9 258 36.8
A07p38800 Brassica napus HOM05D006979 ORTHO05D008857 1.2e-39 167.9 283 35.7
BraA07t31434Z Brassica rapa HOM05D006979 ORTHO05D008857 1.2e-39 167.9 283 35.7
Haze_16022 Corylus avellana HOM05D006979 ORTHO05D008857 3.4e-39 166.4 286 36.7
AT1G72640 Arabidopsis thaliana HOM05D006979 ORTHO05D008857 1.9e-37 160.6 206 41.7
MELO3C024358.2 Cucumis melo HOM05D006979 ORTHO05D008857 2.5e-34 150.2 146 53.4
Mapoly0030s0153 Marchantia polymorpha HOM05D006979 ORTHO05D008857 3.3e-34 149.8 148 62.2
arahy.Tifrunner.gnm1.ann1.4E7AR5 Arachis hypogaea HOM05D006979 ORTHO05D008857 1.4e-32 144.4 201 41.3
Nn6g35601 Nelumbo nucifera HOM05D006979 ORTHO05D008857 3.1e-32 143.3 264 34.5
arahy.Tifrunner.gnm1.ann1.IV001U Arachis hypogaea HOM05D006979 ORTHO05D008857 9.0e-32 141.7 201 40.8
Ca_05018_v3 Cicer arietinum L. HOM05D006979 ORTHO05D008857 1.2e-31 141.4 187 40.6
Hma1.2p1_0496F.1_g166210 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 2.6e-31 140.2 176 42.0
Psat4g183680 Pisum sativum HOM05D006979 ORTHO05D008857 7.6e-31 138.7 201 37.8
EL10Ac7g16405 Beta vulgaris HOM05D006979 ORTHO05D008857 2.3e-27 127.1 271 33.9
Hma1.2p1_0496F.1_g166200 Hydrangea macrophylla HOM05D006979 ORTHO05D008857 2.2e-25 120.6 193 38.3
CARHR065560 Cardamine hirsuta HOM05D006979 ORTHO05D008857 3.4e-23 113.2 187 35.8
Ah.08g216750 Amaranthus hybridus HOM05D006979 ORTHO05D008857 2.5e-21 107.1 121 50.4
FAN14G3231 Fragaria x ananassa HOM05D006979 ORTHO05D008857 2.1e-20 104.0 152 34.2
Cre02.g095133 Chlamydomonas reinhardtii HOM05D006979 ORTHO05D008857 9.7e-18 95.1 269 32.0
SEGI_25115 Sequoiadendron giganteum HOM05D006979 ORTHO05D008857 9.7e-18 95.1 123 39.8
MCO12G160 Micromonas commoda HOM05D006979 ORTHO05D008857 1.1e-13 81.6 271 30.6
PRCOL_00001479 Prasinoderma coloniale HOM05D006979 ORTHO05D008857 1.8e-11 74.3 244 30.3
Lj3g0005938 Lotus japonicus HOM05D003730 ORTHO05D004458 9.1e-08 62.0 241 26.6
CiPaw.09G194500 Carya illinoinensis HOM05D003730 ORTHO05D004458 1.2e-07 61.6 249 26.1
Ca_27652_v3 Cicer arietinum L. HOM05D003730 ORTHO05D004458 2.0e-07 60.8 243 27.2
VMungo1383G3507 Vigna mungo HOM05D003730 ORTHO05D004458 3.4e-07 60.1 249 25.7
Phvul.010G011300 Phaseolus vulgaris HOM05D003730 ORTHO05D004458 7.7e-07 58.9 243 26.3
Glyma.07G133200 Glycine max HOM05D003730 ORTHO05D004458 1.3e-06 58.2 246 26.0
Sed0018240 Sechium edule HOM05D003730 ORTHO05D004458 2.2e-06 57.4 243 25.9
Ca_07559_v3 Cicer arietinum L. HOM05D003730 ORTHO05D004458 2.9e-06 57.0 249 24.9
TAR623G1158 Trochodendron aralioides HOM05D003730 ORTHO05D004458 2.9e-06 57.0 246 26.0
Lj1g0003421 Lotus japonicus HOM05D003730 ORTHO05D004458 3.8e-06 56.6 246 25.6
Psat7g235680 Pisum sativum HOM05D003730 ORTHO05D004458 3.8e-06 56.6 233 26.2
Sp4g20020 Schrenkiella parvula HOM05D003730 ORTHO05D004458 3.8e-06 56.6 243 25.1
Glyma.18G182600 Glycine max HOM05D003730 ORTHO05D004458 5.0e-06 56.2 249 25.3
Hma1.2p1_1889F.1_g306630 Hydrangea macrophylla HOM05D003730 ORTHO05D004458 6.5e-06 55.8 230 26.1
Phvul.008G119600 Phaseolus vulgaris HOM05D003730 ORTHO05D004458 8.5e-06 55.5 249 25.7
TWI77G0750 Tripterygium wilfordii HOM05D003730 ORTHO05D004458 8.5e-06 55.5 227 26.0


User provided reference genes

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