Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0229 Selaginella moellendorffii HOM05D005104 ORTHO05D006614 5.2e-99 364.8 240 100.0
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 7.6e-34 148.3 194 52.1
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 2.9e-33 146.4 185 53.0
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 1.1e-32 144.4 203 48.8
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 5.5e-32 142.1 185 50.3
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 9.3e-32 141.4 186 51.1
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 1.2e-31 141.0 199 49.7
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 1.6e-31 140.6 199 49.2
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 2.7e-31 139.8 192 48.4
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 4.6e-31 139.0 204 48.5
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 4.6e-31 139.0 186 51.6
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 4.6e-31 139.0 186 51.6
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 6.0e-31 138.7 189 47.1
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 6.0e-31 138.7 194 51.0
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 1.8e-30 137.1 199 48.2
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 1.8e-30 137.1 199 48.2
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 1.8e-30 137.1 187 49.2
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 2.3e-30 136.7 210 47.1
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 2.3e-30 136.7 182 49.5
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 5.1e-30 135.6 195 48.7
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 5.1e-30 135.6 193 49.2
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 6.7e-30 135.2 184 48.4
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 6.7e-30 135.2 184 48.4
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 6.7e-30 135.2 198 48.0
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 6.7e-30 135.2 182 51.6
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 8.7e-30 134.8 181 50.8
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 8.7e-30 134.8 203 47.3
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 8.7e-30 134.8 189 49.2
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 1.5e-29 134.0 185 49.2
Potri.003G023601 Populus trichocarpa HOM05D005104 ORTHO05D006614 1.5e-29 134.0 204 45.6
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 1.9e-29 133.7 184 50.0
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 1.9e-29 133.7 188 46.8
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 2.5e-29 133.3 189 49.2
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 3.3e-29 132.9 197 49.2
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 3.3e-29 132.9 198 48.0
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 3.3e-29 132.9 191 48.2
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 5.7e-29 132.1 202 45.0
CDE10G0587 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 5.7e-29 132.1 199 46.7
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 5.7e-29 132.1 182 49.5
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 7.4e-29 131.7 188 48.9
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 7.4e-29 131.7 186 48.9
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 7.4e-29 131.7 182 50.0
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 9.7e-29 131.3 187 48.1
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 1.3e-28 131.0 185 50.3
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.3e-28 131.0 192 47.4
Zm00001eb194200 Zea mays HOM05D005104 ORTHO05D006614 1.3e-28 131.0 187 50.8
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 1.6e-28 130.6 182 47.3
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 1.6e-28 130.6 182 47.8
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 1.6e-28 130.6 215 44.7
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 2.2e-28 130.2 193 48.2
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 2.8e-28 129.8 193 46.6
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 3.7e-28 129.4 189 47.6
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 4.8e-28 129.0 184 46.7
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 4.8e-28 129.0 188 48.4
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 4.8e-28 129.0 203 44.3
Os02g0753200 Oryza sativa ssp. japonica HOM05D005104 ORTHO05D006614 4.8e-28 129.0 181 50.8
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 4.8e-28 129.0 182 47.8
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 4.8e-28 129.0 192 49.5
Zm00001eb255190 Zea mays HOM05D005104 ORTHO05D006614 6.3e-28 128.6 178 51.7
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 8.2e-28 128.3 186 48.4
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 8.2e-28 128.3 182 47.3
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 8.2e-28 128.3 190 49.5
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 1.1e-27 127.9 185 47.6
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 1.4e-27 127.5 184 47.8
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 1.4e-27 127.5 184 48.4
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 1.4e-27 127.5 181 48.6
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 1.4e-27 127.5 190 48.9
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 1.8e-27 127.1 203 44.3
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 2.4e-27 126.7 192 48.4
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 2.4e-27 126.7 195 45.1
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 3.1e-27 126.3 179 48.6
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 3.1e-27 126.3 183 48.1
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 3.1e-27 126.3 214 47.2
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 3.1e-27 126.3 207 44.0
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 3.1e-27 126.3 194 46.9
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 4.1e-27 125.9 182 48.4
C09p58340 Brassica napus HOM05D005104 ORTHO05D006614 4.1e-27 125.9 181 48.6
C09p58390 Brassica napus HOM05D005104 ORTHO05D006614 4.1e-27 125.9 181 48.6
BolC9t58698H Brassica oleracea HOM05D005104 ORTHO05D006614 4.1e-27 125.9 181 48.6
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 5.3e-27 125.6 179 48.0
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 5.3e-27 125.6 187 48.1
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 6.9e-27 125.2 184 47.8
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 6.9e-27 125.2 184 46.7
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 9.0e-27 124.8 211 43.6
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 1.5e-26 124.0 183 48.6
C06p26800 Brassica napus HOM05D005104 ORTHO05D006614 2.0e-26 123.6 182 48.4
BolC6t37855H Brassica oleracea HOM05D005104 ORTHO05D006614 2.0e-26 123.6 182 48.4
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 2.0e-26 123.6 183 45.9
Lj5A240T40 Lonicera japonica HOM05D005104 ORTHO05D006614 2.0e-26 123.6 137 57.7
PSO541G4381 Papaver somniferum HOM05D005104 ORTHO05D006614 5.9e-26 122.1 201 41.8
AagrBONN_evm.TU.Sc2ySwM_117.984 Anthoceros agrestis HOM05D005104 ORTHO05D006614 7.6e-26 121.7 184 45.7
PSO781G0266 Papaver somniferum HOM05D005104 ORTHO05D006614 7.6e-26 121.7 201 41.8
BcaC08g45071 Brassica carinata HOM05D005104 ORTHO05D006614 1.0e-25 121.3 182 47.8
MBI02_g08741_MAGBIO Magnolia biondii HOM05D005104 ORTHO05D006614 1.3e-25 120.9 136 56.6
vmacro19925 Vaccinium macrocarpon HOM05D005104 ORTHO05D006614 1.7e-25 120.6 136 57.4
C02p46090 Brassica napus HOM05D005104 ORTHO05D006614 2.2e-25 120.2 183 47.5
Pp3c18_21190 Physcomitrium patens HOM05D005104 ORTHO05D006614 3.8e-25 119.4 186 47.3
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 5.0e-25 119.0 199 43.7
SEGI_35517 Sequoiadendron giganteum HOM05D005104 ORTHO05D006614 6.5e-25 118.6 197 44.7
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 8.5e-25 118.2 182 45.1
Cpa.g.sc42.74 Carica papaya HOM05D005104 ORTHO05D006614 1.9e-24 117.1 200 43.5
Mapoly0096s0033 Marchantia polymorpha HOM05D005104 ORTHO05D006614 2.5e-24 116.7 198 41.9
Aa31LG1G17770 Aethionema arabicum HOM05D005104 ORTHO05D006614 5.5e-24 115.5 174 47.7
Sabra01G0157800 Salix brachista HOM05D005104 ORTHO05D006614 7.2e-24 115.2 223 43.5
GSVIVG01003087001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.2e-23 114.4 138 53.6
GSVIVG01013334001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.2e-23 114.4 138 53.6
FAN24G3378 Fragaria x ananassa HOM05D005104 ORTHO05D006614 2.1e-23 113.6 132 53.8
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 6.1e-23 112.1 207 44.0
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 1.1e-21 107.8 187 44.9
GSVIVG01003093001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.1e-21 107.8 113 55.8
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 9.7e-21 104.8 192 43.2
BraA03t13815Z Brassica rapa HOM05D005104 ORTHO05D006614 1.3e-20 104.4 179 43.0
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 2.2e-20 103.6 184 42.4
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 3.7e-20 102.8 178 43.3
Ah.01g009520 Amaranthus hybridus HOM05D005104 ORTHO05D006614 5.0e-17 92.4 176 41.5
BolC4t25904H Brassica oleracea HOM05D005104 ORTHO05D006614 6.5e-17 92.0 74 68.9
Sc08g0003350 Simmondsia chinensis HOM05D005104 ORTHO05D006614 2.7e-15 86.7 128 49.2
EL10Ac9g21466 Beta vulgaris HOM05D005104 ORTHO05D006614 1.8e-14 84.0 75 64.0
Hma1.2p1_0522F.1_g171590 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 1.8e-14 84.0 149 40.9
Nitab4.5_0000078g0030 Nicotiana tabacum HOM05D005104 ORTHO05D006614 5.9e-10 68.9 189 36.0
CBR_g47116 Chara braunii HOM05D005104 ORTHO05D006614 3.2e-08 63.2 153 34.0


User provided reference genes

Program Settings