Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 3.4e-197 691.4 340 100.0
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 2.4e-81 306.6 347 47.0
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 6.5e-79 298.5 270 53.7
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 1.9e-75 287.0 324 45.1
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 2.5e-75 286.6 324 46.6
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 4.8e-74 282.3 330 44.8
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 8.2e-74 281.6 325 45.2
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 1.4e-73 280.8 327 45.3
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 1.4e-73 280.8 343 43.4
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 1.8e-73 280.4 329 43.8
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 3.1e-73 279.6 344 44.5
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 1.2e-72 277.7 324 44.4
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 1.5e-72 277.3 324 44.8
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 1.5e-72 277.3 324 43.5
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 3.4e-72 276.2 331 45.3
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 3.4e-72 276.2 349 42.7
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 3.4e-72 276.2 328 44.2
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 3.4e-72 276.2 338 43.5
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 5.9e-72 275.4 326 44.2
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 5.9e-72 275.4 325 43.1
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 7.7e-72 275.0 317 43.2
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 1.0e-71 274.6 329 44.7
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 1.3e-71 274.2 338 43.8
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 1.7e-71 273.9 328 43.9
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 1.7e-71 273.9 325 42.5
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 2.2e-71 273.5 330 43.9
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 3.8e-71 272.7 330 42.4
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 5.0e-71 272.3 355 41.4
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 6.5e-71 271.9 319 43.6
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 6.5e-71 271.9 347 41.5
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 8.5e-71 271.6 333 42.0
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 1.9e-70 270.4 325 43.7
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 3.2e-70 269.6 324 43.2
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 3.2e-70 269.6 341 42.5
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 5.5e-70 268.9 330 43.9
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 7.2e-70 268.5 336 42.6
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 9.4e-70 268.1 330 42.4
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 9.4e-70 268.1 348 43.1
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 1.2e-69 267.7 325 44.3
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 2.7e-69 266.5 333 44.4
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 2.7e-69 266.5 342 41.8
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 3.6e-69 266.2 330 41.5
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 3.6e-69 266.2 363 40.2
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 4.6e-69 265.8 363 40.2
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 6.1e-69 265.4 276 46.7
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 7.9e-69 265.0 276 47.5
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 1.0e-68 264.6 326 42.6
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 1.8e-68 263.8 344 40.4
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 2.3e-68 263.5 272 47.4
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 3.0e-68 263.1 279 48.0
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 3.0e-68 263.1 277 47.7
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 3.0e-68 263.1 330 42.4
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 3.9e-68 262.7 326 43.6
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 3.9e-68 262.7 276 47.1
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 5.1e-68 262.3 354 39.5
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 8.8e-68 261.5 344 40.1
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 1.5e-67 260.8 326 42.9
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 1.5e-67 260.8 325 41.5
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 1.5e-67 260.8 277 46.9
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 2.5e-67 260.0 339 39.5
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 4.3e-67 259.2 366 40.7
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 4.3e-67 259.2 333 43.5
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 3.7e-66 256.1 325 42.8
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 4.8e-66 255.8 325 42.2
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 6.3e-66 255.4 325 43.4
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 6.3e-66 255.4 274 47.8
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 8.2e-66 255.0 326 42.6
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 8.2e-66 255.0 347 42.7
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 1.1e-65 254.6 325 42.8
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 1.1e-65 254.6 326 43.3
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 1.4e-65 254.2 324 43.2
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 1.4e-65 254.2 324 43.2
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 2.4e-65 253.4 274 46.0
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 2.4e-65 253.4 273 46.9
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 2.4e-65 253.4 324 43.2
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 2.4e-65 253.4 273 46.9
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 3.1e-65 253.1 331 42.6
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 6.9e-65 251.9 286 45.1
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 2.6e-64 250.0 291 44.3
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 5.5e-62 242.3 268 45.1
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 1.7e-58 230.7 386 36.8
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 4.8e-58 229.2 336 39.9
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 6.3e-58 228.8 260 42.7
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 7.0e-57 225.3 328 40.9
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 1.2e-56 224.6 265 42.3
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 1.2e-56 224.6 211 48.8
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 2.0e-56 223.8 328 40.9
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 3.5e-56 223.0 211 49.3
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 5.9e-56 222.2 230 46.5
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 1.5e-54 217.6 232 43.5
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 9.4e-54 214.9 232 45.7
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 3.6e-53 213.0 347 37.5
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 1.0e-52 211.5 323 38.1
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 1.8e-52 210.7 238 44.5
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 8.8e-52 208.4 234 44.0
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 7.5e-51 205.3 347 36.9
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 1.8e-49 200.7 329 38.3
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 6.5e-47 192.2 301 36.9
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 9.8e-43 178.3 268 38.8
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 3.7e-42 176.4 174 47.1
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 6.3e-42 175.6 168 48.8
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 5.0e-31 139.4 194 37.6
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 5.6e-22 109.4 74 62.2
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 4.1e-17 93.2 65 60.0
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 6.4e-10 69.3 100 42.0
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 1.9e-09 67.8 96 41.7
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 4.6e-08 63.2 92 39.1


User provided reference genes

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