Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0188 Selaginella moellendorffii HOM05D008676 ORTHO05D010936 1.0e-257 892.9 441 100.0
SMO348G0088 Selaginella moellendorffii HOM05D008676 ORTHO05D010936 1.0e-145 520.8 365 66.8
Pp3c6_25370 Physcomitrium patens HOM05D008676 ORTHO05D010936 4.2e-131 472.2 360 61.4
PRCOL_00007033 Prasinoderma coloniale HOM05D008676 ORTHO05D010936 2.7e-101 373.2 371 49.6
MCO03G450 Micromonas commoda HOM05D008676 ORTHO05D010936 8.1e-98 361.7 387 47.8
Cre02.g146650 Chlamydomonas reinhardtii HOM05D008676 ORTHO05D010936 2.2e-95 353.6 375 47.5
CBR_g12467 Chara braunii HOM05D008676 ORTHO05D010936 4.4e-88 329.3 566 34.8
MCO05G481 Micromonas commoda HOM05D008676 ORTHO05D010936 1.5e-75 287.7 362 42.3
Cre01.g050451 Chlamydomonas reinhardtii HOM05D008676 ORTHO05D010936 2.7e-61 240.4 452 33.6
AagrBONN_evm.TU.Sc2ySwM_368.1640 Anthoceros agrestis HOM05D066407 ORTHO05D010936 8.7e-60 235.3 170 65.3
AagrBONN_evm.TU.Sc2ySwM_368.1638 Anthoceros agrestis HOM05D066407 ORTHO05D010936 1.3e-58 231.5 170 64.7
CBR_g51027 Chara braunii HOM05D008676 ORTHO05D010936 3.8e-55 219.9 328 36.6
MCO11G738 Micromonas commoda HOM05D008676 ORTHO05D010936 2.0e-48 197.6 293 35.2
PRCOL_00001343 Prasinoderma coloniale HOM05D008676 ORTHO05D010936 3.0e-44 183.7 347 33.4
AagrBONN_evm.TU.Sc2ySwM_228.857 Anthoceros agrestis HOM05D008676 ORTHO05D010936 7.4e-43 179.1 351 31.9
Pp3c1_16240 Physcomitrium patens HOM05D008676 ORTHO05D010936 1.7e-42 177.9 371 30.2
Mapoly0012s0012 Marchantia polymorpha HOM05D008676 ORTHO05D010936 6.9e-41 172.6 342 31.9
SMO337G0080 Selaginella moellendorffii HOM05D008676 ORTHO05D010936 1.3e-39 168.3 334 30.8
CBR_g54068 Chara braunii HOM05D008676 ORTHO05D010936 2.2e-39 167.5 266 36.1
Cre17.g699500 Chlamydomonas reinhardtii HOM05D008676 ORTHO05D010936 2.2e-39 167.5 367 28.6
MCO11G220 Micromonas commoda HOM05D008676 ORTHO05D010936 1.1e-38 165.2 350 32.0
AagrBONN_evm.TU.Sc2ySwM_369.291 Anthoceros agrestis HOM05D008676 ORTHO05D010936 3.0e-36 157.1 302 31.8
Cre02.g117350 Chlamydomonas reinhardtii HOM05D008676 ORTHO05D010936 2.0e-35 154.5 378 28.0
MCO10G276 Micromonas commoda HOM05D008676 ORTHO05D010936 2.8e-34 150.6 404 27.7
PRCOL_00004385 Prasinoderma coloniale HOM05D008676 ORTHO05D010936 1.0e-31 142.1 352 28.4
Cre06.g300250 Chlamydomonas reinhardtii HOM05D008676 ORTHO05D010936 1.9e-30 137.9 313 31.3
PRCOL_00002565 Prasinoderma coloniale HOM05D008676 ORTHO05D010936 3.6e-29 133.7 359 30.4
PRCOL_00003912 Prasinoderma coloniale HOM05D008676 ORTHO05D010936 3.6e-29 133.7 397 27.7
MCO15G046 Micromonas commoda HOM05D008676 ORTHO05D010936 2.0e-27 127.9 377 27.6
Cre09.g403108 Chlamydomonas reinhardtii HOM05D008676 ORTHO05D010936 8.2e-26 122.5 371 27.0
Cre13.g591700 Chlamydomonas reinhardtii HOM05D008676 ORTHO05D010936 4.2e-22 110.2 306 29.1
PRCOL_00006674 Prasinoderma coloniale HOM05D008676 ORTHO05D010936 1.7e-15 88.2 232 27.6
Cre12.g547700 Chlamydomonas reinhardtii HOM05D008676 ORTHO05D010936 8.5e-15 85.9 180 35.6
CBR_g50631 Chara braunii HOM05D008676 ORTHO05D010936 2.5e-14 84.3 143 34.3
MCO15G671 Micromonas commoda HOM05D008676 ORTHO05D010936 4.2e-14 83.6 383 25.1
Cre03.g145447 Chlamydomonas reinhardtii HOM05D008676 ORTHO05D010936 2.6e-11 74.3 253 25.7
Cre09.g394769 Chlamydomonas reinhardtii HOM05D008676 ORTHO05D010936 9.8e-11 72.4 351 25.1
CBR_g36369 Chara braunii HOM05D008676 ORTHO05D010936 1.7e-10 71.6 65 49.2
Eucgr.C03329 Eucalyptus grandis HOM05D006378 ORTHO05D007959 3.7e-10 70.5 298 25.2
CBR_g36370 Chara braunii HOM05D008676 ORTHO05D010936 4.9e-10 70.1 77 41.6
ECA236G3597 Erigeron canadensis HOM05D006378 ORTHO05D007959 8.3e-10 69.3 298 24.2
Eucgr.C03264 Eucalyptus grandis HOM05D006378 ORTHO05D007959 8.3e-10 69.3 298 24.8
HanXRQChr06g0178331 Helianthus annuus HOM05D006378 ORTHO05D007959 1.1e-09 68.9 298 24.2
Sed0026053 Sechium edule HOM05D006378 ORTHO05D007959 1.4e-09 68.6 297 24.2
Lsat_1_v5_gn_8_86460 Lactuca sativa HOM05D006378 ORTHO05D007959 1.8e-09 68.2 298 24.5
PGR044G1219 Punica granatum HOM05D006378 ORTHO05D007959 1.8e-09 68.2 298 25.2
CARHR071080 Cardamine hirsuta HOM05D006378 ORTHO05D007959 2.4e-09 67.8 300 24.0
Thhalv10003638m.g Eutrema salsugineum HOM05D006378 ORTHO05D007959 2.4e-09 67.8 298 23.2
Aa31LG2G20840 Aethionema arabicum HOM05D006378 ORTHO05D007959 3.1e-09 67.4 301 23.3
Carub.0002s2445 Capsella rubella HOM05D006378 ORTHO05D007959 3.1e-09 67.4 300 23.7
A04p10600 Brassica napus HOM05D006378 ORTHO05D007959 7.0e-09 66.2 298 23.5
BraA04t16723Z Brassica rapa HOM05D006378 ORTHO05D007959 7.0e-09 66.2 298 23.5
Sc08g0008890 Simmondsia chinensis HOM05D006378 ORTHO05D007959 7.0e-09 66.2 309 23.9
AL2G37770 Arabidopsis lyrata HOM05D006378 ORTHO05D007959 9.2e-09 65.9 300 24.0
BolC4t25998H Brassica oleracea HOM05D006378 ORTHO05D007959 9.2e-09 65.9 298 23.5
Migut.J00925 Erythranthe guttata HOM05D006378 ORTHO05D007959 9.2e-09 65.9 298 25.2
FAN19G1878 Fragaria x ananassa HOM05D006378 ORTHO05D007959 9.2e-09 65.9 299 23.1
PRCOL_00006851 Prasinoderma coloniale HOM05D008676 ORTHO05D010936 9.2e-09 65.9 116 34.5
BcaC02g09569 Brassica carinata HOM05D006378 ORTHO05D007959 1.2e-08 65.5 298 23.5
C04p44250 Brassica napus HOM05D006378 ORTHO05D007959 1.2e-08 65.5 298 23.5
CANSAT56G1041 Cannabis sativa HOM05D006378 ORTHO05D007959 1.2e-08 65.5 296 24.3
Oeu035912.1 Olea europaea HOM05D006378 ORTHO05D007959 1.2e-08 65.5 298 23.8
AT1G77550 Arabidopsis thaliana HOM05D006378 ORTHO05D007959 1.6e-08 65.1 298 23.2
BcaB06g26949 Brassica carinata HOM05D006378 ORTHO05D007959 1.6e-08 65.1 298 24.2
ClCG03G015080 Citrullus lanatus HOM05D006378 ORTHO05D007959 1.6e-08 65.1 300 24.3
Pp3c6_19960 Physcomitrium patens HOM05D006378 ORTHO05D007959 2.0e-08 64.7 298 24.2
PRCOL_00000498 Prasinoderma coloniale HOM05D008676 ORTHO05D010936 2.0e-08 64.7 209 25.8
Dinv42394 Davidia involucrata HOM05D006378 ORTHO05D007959 2.7e-08 64.3 298 24.2
FvH4_1g08650 Fragaria vesca HOM05D006378 ORTHO05D007959 3.5e-08 63.9 297 22.9
RcHm_v2.0_Chr2g0094931 Rosa chinensis HOM05D006378 ORTHO05D007959 3.5e-08 63.9 297 22.6
FAN26G1418 Fragaria x ananassa HOM05D006378 ORTHO05D007959 4.5e-08 63.5 297 22.9
FAN26G3001 Fragaria x ananassa HOM05D006378 ORTHO05D007959 4.5e-08 63.5 297 22.9
QL11p000773 Quercus lobata HOM05D006378 ORTHO05D007959 5.9e-08 63.2 297 22.2
CsaV3_1G041050 Cucumis sativus L. HOM05D006378 ORTHO05D007959 7.7e-08 62.8 297 23.6
SalBow6G1560 Salvia bowleyana HOM05D006378 ORTHO05D007959 7.7e-08 62.8 298 23.8
Sp7g06720 Schrenkiella parvula HOM05D006378 ORTHO05D007959 7.7e-08 62.8 298 22.5
CAN.G62.5 Capsicum annuum HOM05D006378 ORTHO05D007959 1.0e-07 62.4 298 23.5
CBR_g24179 Chara braunii HOM05D008676 ORTHO05D010936 1.0e-07 62.4 111 33.3
Ah.09g231620 Amaranthus hybridus HOM05D006378 ORTHO05D007959 1.3e-07 62.0 301 23.6
TWI34G0472 Tripterygium wilfordii HOM05D006378 ORTHO05D007959 1.3e-07 62.0 312 21.5
TAR383G0342 Trochodendron aralioides HOM05D006378 ORTHO05D007959 1.3e-07 62.0 298 24.2
Cfa002988 Carpinus fangiana HOM05D006378 ORTHO05D007959 1.7e-07 61.6 298 22.1
PSO135G0915 Papaver somniferum HOM05D006378 ORTHO05D007959 1.7e-07 61.6 297 24.2
Haze_26013 Corylus avellana HOM05D006378 ORTHO05D007959 2.3e-07 61.2 298 22.1
Duzib168G0703 Durio zibethinus HOM05D006378 ORTHO05D007959 2.3e-07 61.2 297 23.6
Solyc07g041870.3 Solanum lycopersicum HOM05D006378 ORTHO05D007959 2.3e-07 61.2 298 22.8
Prupe.7G198800 Prunus persica HOM05D006378 ORTHO05D007959 2.9e-07 60.8 316 22.8
AUR62025249 Chenopodium quinoa HOM05D006378 ORTHO05D007959 3.8e-07 60.5 309 23.3
MELO3C015521.2 Cucumis melo HOM05D006378 ORTHO05D007959 3.8e-07 60.5 297 23.2
GSVIVG01015082001 Vitis vinifera HOM05D006378 ORTHO05D007959 3.8e-07 60.5 300 24.7
Aqoxy7G04130 Aquilegia oxysepala HOM05D006378 ORTHO05D007959 5.0e-07 60.1 310 23.2
Sopen07g021350 Solanum pennellii HOM05D006378 ORTHO05D007959 6.6e-07 59.7 298 23.2
AUR62028935 Chenopodium quinoa HOM05D006378 ORTHO05D007959 8.6e-07 59.3 309 23.0
CBR_g12041 Chara braunii HOM05D006378 ORTHO05D007959 1.1e-06 58.9 299 22.7
Hma1.2p1_0179F.1_g079520 Hydrangea macrophylla HOM05D006378 ORTHO05D007959 1.1e-06 58.9 237 23.6
MCO13G127 Micromonas commoda HOM05D008676 ORTHO05D048976 1.1e-06 58.9 330 20.0
Nitab4.5_0000343g0150 Nicotiana tabacum HOM05D006378 ORTHO05D007959 1.1e-06 58.9 298 23.8
SGA_v2.0_scaffold91G28112 Striga asiatica HOM05D006378 ORTHO05D007959 1.1e-06 58.9 313 22.4
Atru.chr7.1707 Acer truncatum HOM05D006378 ORTHO05D007959 1.5e-06 58.5 298 22.8
Ca_02206_v3 Cicer arietinum L. HOM05D006378 ORTHO05D007959 1.5e-06 58.5 310 23.2
Gohir.A06G076500 Gossypium hirsutum HOM05D006378 ORTHO05D007959 1.5e-06 58.5 298 23.5
MBI19_g16222_MAGBIO Magnolia biondii HOM05D006378 ORTHO05D007959 1.5e-06 58.5 298 22.8
Peaxi162Scf00127g01816 Petunia axillaris HOM05D006378 ORTHO05D007959 1.5e-06 58.5 386 21.5
Sabra06G0111000 Salix brachista HOM05D006378 ORTHO05D007959 1.5e-06 58.5 296 23.3
PGSC0003DMG400019029 Solanum tuberosum HOM05D006378 ORTHO05D007959 1.5e-06 58.5 297 22.2
THA.LOC104826591 Tarenaya hassleriana HOM05D006378 ORTHO05D007959 1.5e-06 58.5 298 21.8
vmacro06342 Vaccinium macrocarpon HOM05D006378 ORTHO05D007959 1.5e-06 58.5 308 22.7
arahy.Tifrunner.gnm1.ann1.CBKZ0V Arachis hypogaea HOM05D006378 ORTHO05D007959 1.9e-06 58.2 310 21.9
Manes.03G040400 Manihot esculenta HOM05D006378 ORTHO05D007959 1.9e-06 58.2 298 22.5
Nitab4.5_0009436g0010 Nicotiana tabacum HOM05D006378 ORTHO05D007959 1.9e-06 58.2 298 23.2
SMO174G0008 Selaginella moellendorffii HOM05D006378 ORTHO05D007959 1.9e-06 58.2 309 22.0
CSS0003361 Camellia sinensis var. sinensis HOM05D006378 ORTHO05D007959 2.5e-06 57.8 298 24.2
Gohir.D06G075500 Gossypium hirsutum HOM05D006378 ORTHO05D007959 2.5e-06 57.8 298 23.2
Psat1g134280 Pisum sativum HOM05D006378 ORTHO05D007959 3.3e-06 57.4 310 22.6
arahy.Tifrunner.gnm1.ann1.LZ43MP Arachis hypogaea HOM05D006378 ORTHO05D007959 4.3e-06 57.0 310 21.6
COL.COLO4_18097 Corchorus olitorius HOM05D006378 ORTHO05D007959 4.3e-06 57.0 208 26.4
Potri.006G141900 Populus trichocarpa HOM05D006378 ORTHO05D007959 4.3e-06 57.0 296 23.3
MD15G1217600 Malus domestica HOM05D006378 ORTHO05D007959 5.6e-06 56.6 298 23.2
Rhsim03G0227500 Rhododendron simsii HOM05D006378 ORTHO05D007959 5.6e-06 56.6 297 22.6
VMungo1309G1044 Vigna mungo HOM05D006378 ORTHO05D007959 5.6e-06 56.6 310 21.9
ATR0598G254 Amborella trichopoda HOM05D006378 ORTHO05D007959 7.3e-06 56.2 294 22.4
EL10Ac8g19061 Beta vulgaris HOM05D006378 ORTHO05D007959 7.3e-06 56.2 317 21.8
Medtr2g041640 Medicago truncatula HOM05D006378 ORTHO05D007959 7.3e-06 56.2 309 22.0
Thecc.09G076800 Theobroma cacao HOM05D006378 ORTHO05D007959 7.3e-06 56.2 298 22.8
TPR.G28586 Trifolium pratense HOM05D006378 ORTHO05D007959 7.3e-06 56.2 309 22.3
MSTRG.19459 Avicennia marina HOM05D006378 ORTHO05D007959 9.5e-06 55.8 297 22.2
Ciclev10007418m.g Citrus clementina HOM05D006378 ORTHO05D007959 9.5e-06 55.8 226 23.5
Lj7C687T7 Lonicera japonica HOM05D006378 ORTHO05D007959 9.5e-06 55.8 297 22.6


User provided reference genes

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