Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0162 Selaginella moellendorffii HOM05D006365 ORTHO05D007893 8.1e-143 510.4 253 100.0
AagrBONN_evm.TU.Sc2ySwM_228.2414 Anthoceros agrestis HOM05D006365 ORTHO05D007893 6.7e-65 251.5 249 51.4
SEGI_04676 Sequoiadendron giganteum HOM05D006365 ORTHO05D007893 1.3e-63 247.3 220 54.5
Medtr1g070375 Medicago truncatula HOM05D006365 ORTHO05D007893 5.9e-61 238.4 227 53.3
CBR_g3113 Chara braunii HOM05D006365 ORTHO05D007893 1.7e-60 236.9 237 48.9
Atru.chr5.1605 Acer truncatum HOM05D006365 ORTHO05D007893 6.5e-60 235.0 223 52.5
Glyma.10G034000 Glycine max HOM05D006365 ORTHO05D007893 8.5e-60 234.6 224 53.6
Os03g0164700 Oryza sativa ssp. japonica HOM05D006365 ORTHO05D007893 1.5e-59 233.8 225 51.1
TPR.G9050 Trifolium pratense HOM05D006365 ORTHO05D007893 1.9e-59 233.4 227 52.0
VMungo0720G1621 Vigna mungo HOM05D006365 ORTHO05D007893 1.9e-59 233.4 228 51.8
Duzib211G0170 Durio zibethinus HOM05D006365 ORTHO05D007893 2.5e-59 233.0 221 52.5
Glyma.13G120200 Glycine max HOM05D006365 ORTHO05D007893 3.2e-59 232.6 224 51.8
TWI12G0027 Tripterygium wilfordii HOM05D006365 ORTHO05D007893 3.2e-59 232.6 239 49.8
Gorai.004G074000 Gossypium raimondii HOM05D006365 ORTHO05D007893 4.2e-59 232.3 222 52.7
Phvul.007G178600 Phaseolus vulgaris HOM05D006365 ORTHO05D007893 4.2e-59 232.3 228 51.8
Gohir.A08G061000 Gossypium hirsutum HOM05D006365 ORTHO05D007893 5.5e-59 231.9 222 52.7
TWI75G1360 Tripterygium wilfordii HOM05D006365 ORTHO05D007893 7.2e-59 231.5 242 48.3
Psat6g056320 Pisum sativum HOM05D006365 ORTHO05D007893 9.4e-59 231.1 227 52.4
COL.COLO4_08271 Corchorus olitorius HOM05D006365 ORTHO05D007893 1.2e-58 230.7 222 51.8
arahy.Tifrunner.gnm1.ann1.8IP52C Arachis hypogaea HOM05D006365 ORTHO05D007893 1.6e-58 230.3 222 53.2
FAN27G2025 Fragaria x ananassa HOM05D006365 ORTHO05D007893 1.6e-58 230.3 222 50.9
Thecc.01G264700 Theobroma cacao HOM05D006365 ORTHO05D007893 2.1e-58 229.9 222 52.3
Lj5g0002733 Lotus japonicus HOM05D006365 ORTHO05D007893 2.7e-58 229.6 223 50.2
Sed0004051 Sechium edule HOM05D006365 ORTHO05D007893 3.6e-58 229.2 225 49.8
arahy.Tifrunner.gnm1.ann1.47C7BL Arachis hypogaea HOM05D006365 ORTHO05D007893 4.7e-58 228.8 222 53.2
PGR044G0103 Punica granatum HOM05D006365 ORTHO05D007893 6.1e-58 228.4 221 51.6
CAN.G1501.1 Capsicum annuum HOM05D006365 ORTHO05D007893 8.0e-58 228.0 225 48.4
Haze_24555 Corylus avellana HOM05D006365 ORTHO05D007893 1.4e-57 227.3 253 48.6
Ciclev10019917m.g Citrus clementina HOM05D006365 ORTHO05D007893 1.8e-57 226.9 255 46.3
MD05G1203500 Malus domestica HOM05D006365 ORTHO05D007893 1.8e-57 226.9 223 51.1
Aqoxy5G00306 Aquilegia oxysepala HOM05D006365 ORTHO05D007893 2.3e-57 226.5 222 50.0
MELO3C015749.2 Cucumis melo HOM05D006365 ORTHO05D007893 2.3e-57 226.5 228 50.4
Gorai.007G143300 Gossypium raimondii HOM05D006365 ORTHO05D007893 2.3e-57 226.5 222 52.7
MD10G1190800 Malus domestica HOM05D006365 ORTHO05D007893 2.3e-57 226.5 223 51.1
FAN15G1626 Fragaria x ananassa HOM05D006365 ORTHO05D007893 3.0e-57 226.1 222 50.5
Lalb_Chr02g0142351 Lupinus albus HOM05D006365 ORTHO05D007893 3.0e-57 226.1 229 49.3
Gohir.D11G134100 Gossypium hirsutum HOM05D006365 ORTHO05D007893 4.0e-57 225.7 222 52.7
Manes.01G200300 Manihot esculenta HOM05D006365 ORTHO05D007893 4.0e-57 225.7 222 50.5
Sopen09g027890 Solanum pennellii HOM05D006365 ORTHO05D007893 4.0e-57 225.7 233 47.2
HPP92_006135 Vanilla planifolia HOM05D006365 ORTHO05D007893 4.0e-57 225.7 224 49.1
Potri.005G220400 Populus trichocarpa HOM05D006365 ORTHO05D007893 5.2e-57 225.3 260 46.5
Gohir.A11G128200 Gossypium hirsutum HOM05D006365 ORTHO05D007893 6.8e-57 224.9 222 52.3
Prupe.8G229800 Prunus persica HOM05D006365 ORTHO05D007893 8.8e-57 224.6 221 50.2
PGSC0003DMG400019907 Solanum tuberosum HOM05D006365 ORTHO05D007893 8.8e-57 224.6 233 46.8
Cfa002346 Carpinus fangiana HOM05D006365 ORTHO05D007893 1.2e-56 224.2 248 48.8
CDE02G1033 Ceratophyllum demersum HOM05D006365 ORTHO05D007893 1.2e-56 224.2 221 50.7
Sabra05G0169100 Salix brachista HOM05D006365 ORTHO05D007893 1.2e-56 224.2 260 46.5
GSVIVG01000761001 Vitis vinifera HOM05D006365 ORTHO05D007893 1.2e-56 224.2 233 49.8
Eucgr.K03306 Eucalyptus grandis HOM05D006365 ORTHO05D007893 2.0e-56 223.4 221 49.8
Potri.002G042700 Populus trichocarpa HOM05D006365 ORTHO05D007893 2.0e-56 223.4 260 46.5
Rhsim13G0031800 Rhododendron simsii HOM05D006365 ORTHO05D007893 2.0e-56 223.4 221 49.8
vmacro02635 Vaccinium macrocarpon HOM05D006365 ORTHO05D007893 2.0e-56 223.4 221 49.3
Cc01_g18670 Coffea canephora HOM05D006365 ORTHO05D007893 2.6e-56 223.0 222 49.5
FAN20G2720 Fragaria x ananassa HOM05D006365 ORTHO05D007893 2.6e-56 223.0 222 50.0
Nitab4.5_0004328g0020 Nicotiana tabacum HOM05D006365 ORTHO05D007893 2.6e-56 223.0 227 47.1
Ca_09701_v3 Cicer arietinum L. HOM05D006365 ORTHO05D007893 4.4e-56 222.2 256 46.1
ClCG09G007650 Citrullus lanatus HOM05D006365 ORTHO05D007893 4.4e-56 222.2 221 50.7
CsaV3_7G027480 Cucumis sativus L. HOM05D006365 ORTHO05D007893 4.4e-56 222.2 221 50.7
TAR362G0809 Trochodendron aralioides HOM05D006365 ORTHO05D007893 7.5e-56 221.5 222 48.6
Actinidia33762 Actinidia chinensis HOM05D006365 ORTHO05D007893 9.8e-56 221.1 221 49.3
DCAR_018456 Daucus carota HOM05D006365 ORTHO05D007893 9.8e-56 221.1 222 49.1
FvH4_2g22240 Fragaria vesca HOM05D006365 ORTHO05D007893 9.8e-56 221.1 255 45.9
FAN24G0578 Fragaria x ananassa HOM05D006365 ORTHO05D007893 9.8e-56 221.1 255 45.9
RcHm_v2.0_Chr6g0289161 Rosa chinensis HOM05D006365 ORTHO05D007893 1.3e-55 220.7 222 49.1
TAR633G0237 Trochodendron aralioides HOM05D006365 ORTHO05D007893 1.7e-55 220.3 222 48.6
ATR0665G646 Amborella trichopoda HOM05D006365 ORTHO05D007893 2.8e-55 219.5 222 49.5
CANSAT01G1790 Cannabis sativa HOM05D006365 ORTHO05D007893 2.8e-55 219.5 225 50.2
SGA_v2.0_scaffold1G00596 Striga asiatica HOM05D006365 ORTHO05D007893 3.7e-55 219.2 225 48.9
Aa31LG1G7780 Aethionema arabicum HOM05D006365 ORTHO05D007893 6.3e-55 218.4 221 49.3
CSS0009937 Camellia sinensis var. sinensis HOM05D006365 ORTHO05D007893 6.3e-55 218.4 223 48.9
QL04p081293 Quercus lobata HOM05D006365 ORTHO05D007893 8.3e-55 218.0 238 46.2
Sc17g0000830 Simmondsia chinensis HOM05D006365 ORTHO05D007893 1.4e-54 217.2 222 50.0
AUR62032234 Chenopodium quinoa HOM05D006365 ORTHO05D007893 1.8e-54 216.9 222 49.1
A10p05310 Brassica napus HOM05D006365 ORTHO05D007893 2.4e-54 216.5 222 47.7
BraA10t42796Z Brassica rapa HOM05D006365 ORTHO05D007893 2.4e-54 216.5 222 47.7
CSS0000446 Camellia sinensis var. sinensis HOM05D006365 ORTHO05D007893 3.1e-54 216.1 223 48.4
unitig_22.g5284 Utricularia gibba HOM05D006365 ORTHO05D007893 3.1e-54 216.1 226 48.7
MSTRG.18301 Avicennia marina HOM05D006365 ORTHO05D007893 4.1e-54 215.7 222 47.7
Thhalv10007491m.g Eutrema salsugineum HOM05D006365 ORTHO05D007893 4.1e-54 215.7 221 48.0
Lsat_1_v5_gn_9_9520 Lactuca sativa HOM05D006365 ORTHO05D007893 4.1e-54 215.7 236 46.6
HanXRQChr10g0281321 Helianthus annuus HOM05D006365 ORTHO05D007893 5.4e-54 215.3 228 49.1
Dinv22456 Davidia involucrata HOM05D006365 ORTHO05D007893 7.0e-54 214.9 222 48.6
Lj2A1156T49 Lonicera japonica HOM05D006365 ORTHO05D007893 7.0e-54 214.9 222 47.7
MBI11_g20313_MAGBIO Magnolia biondii HOM05D006365 ORTHO05D007893 7.0e-54 214.9 203 50.2
Hund09578 Selenicereus undatus HOM05D006365 ORTHO05D007893 9.1e-54 214.5 222 50.0
Carub.0001s0606 Capsella rubella HOM05D006365 ORTHO05D007893 1.2e-53 214.2 221 48.0
AL1G16740 Arabidopsis lyrata HOM05D006365 ORTHO05D007893 2.0e-53 213.4 222 49.1
AT1G06730 Arabidopsis thaliana HOM05D006365 ORTHO05D007893 2.0e-53 213.4 223 48.4
BolC5t29263H Brassica oleracea HOM05D006365 ORTHO05D007893 2.0e-53 213.4 222 47.3
AUR62011919 Chenopodium quinoa HOM05D006365 ORTHO05D007893 2.0e-53 213.4 224 48.2
Nn1g02631 Nelumbo nucifera HOM05D006365 ORTHO05D007893 2.0e-53 213.4 247 45.7
PSO832G0319 Papaver somniferum HOM05D006365 ORTHO05D007893 2.7e-53 213.0 222 47.3
PSO210G3674 Papaver somniferum HOM05D006365 ORTHO05D007893 3.5e-53 212.6 222 47.3
BcaB02g06753 Brassica carinata HOM05D006365 ORTHO05D007893 5.9e-53 211.8 221 47.1
C05p04910 Brassica napus HOM05D006365 ORTHO05D007893 5.9e-53 211.8 224 48.7
CARHR006420 Cardamine hirsuta HOM05D006365 ORTHO05D007893 7.7e-53 211.5 249 45.0
SHI09906 Sapria himalayana HOM05D006365 ORTHO05D007893 2.3e-52 209.9 222 46.8
Sp1g05460 Schrenkiella parvula HOM05D006365 ORTHO05D007893 2.3e-52 209.9 221 48.0
Nitab4.5_0000187g0360 Nicotiana tabacum HOM05D006365 ORTHO05D007893 3.8e-52 209.1 242 44.2
Migut.D00394 Erythranthe guttata HOM05D006365 ORTHO05D007893 5.0e-52 208.8 222 47.7
EL10Ac5g10447 Beta vulgaris HOM05D006365 ORTHO05D007893 8.6e-52 208.0 222 48.2
THA.LOC104826252 Tarenaya hassleriana HOM05D006365 ORTHO05D007893 7.2e-51 204.9 223 46.6
Gohir.D08G070250 Gossypium hirsutum HOM05D006365 ORTHO05D007893 1.2e-50 204.1 209 49.8
Peaxi162Scf00719g00049 Petunia axillaris HOM05D006365 ORTHO05D007893 1.0e-49 201.1 225 46.2
Hma1.2p1_1029F.1_g249750 Hydrangea macrophylla HOM05D006365 ORTHO05D007893 1.4e-49 200.7 222 46.4
THA.LOC104800808 Tarenaya hassleriana HOM05D006365 ORTHO05D007893 3.0e-49 199.5 233 45.9
Cre09.g387050 Chlamydomonas reinhardtii HOM05D006365 ORTHO05D007893 4.0e-49 199.1 258 41.1
DCAR_007340 Daucus carota HOM05D006365 ORTHO05D007893 8.9e-49 198.0 222 46.8
Cpa.g.sc52.148 Carica papaya HOM05D006365 ORTHO05D007893 1.2e-45 187.6 179 50.8
SalBow4G1819 Salvia bowleyana HOM05D006365 ORTHO05D007893 2.3e-44 183.3 321 35.5
Lj1A60T61 Lonicera japonica HOM05D006365 ORTHO05D007893 3.8e-44 182.6 225 43.6
CiPaw.03G259200 Carya illinoinensis HOM05D006365 ORTHO05D007893 6.6e-44 181.8 189 48.7
Dinv34587 Davidia involucrata HOM05D006365 ORTHO05D007893 3.3e-43 179.5 223 43.9
BcaC05g24646 Brassica carinata HOM05D006365 ORTHO05D007893 1.2e-40 171.0 181 48.1
Solyc09g066130.4 Solanum lycopersicum HOM05D006365 ORTHO05D007893 1.2e-40 171.0 173 48.0
MCO01G134 Micromonas commoda HOM05D006365 ORTHO05D007893 6.6e-36 155.2 221 38.5
MBI11_g09868_MAGBIO Magnolia biondii HOM05D006365 ORTHO05D007893 1.1e-33 147.9 177 44.1
PRCOL_00006866 Prasinoderma coloniale HOM05D006365 ORTHO05D007893 1.1e-27 127.9 234 36.3
Zm00001eb004990 Zea mays HOM05D006365 ORTHO05D007893 1.1e-19 101.3 98 52.0
TWI23G0019 Tripterygium wilfordii HOM05D006365 ORTHO05D007893 1.2e-13 81.3 100 42.0
TPR.G16619 Trifolium pratense HOM05D000559 ORTHO05D000596 4.9e-07 59.3 177 26.6
Lj5g0005124 Lotus japonicus HOM05D000559 ORTHO05D000596 1.4e-06 57.8 174 26.4
ATR0691G052 Amborella trichopoda HOM05D000559 ORTHO05D000596 2.4e-06 57.0 139 28.8
Medtr1g076850 Medicago truncatula HOM05D000559 ORTHO05D000596 2.4e-06 57.0 173 26.0
Cpa.g.sc21.231 Carica papaya HOM05D000559 ORTHO05D000596 3.2e-06 56.6 173 27.7
Pp3c21_5300 Physcomitrium patens HOM05D000559 ORTHO05D000596 4.2e-06 56.2 174 24.1


User provided reference genes

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