Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0153 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 1.3e-235 819.3 393 100.0
Pp3c2_6370 Physcomitrium patens HOM05D005603 ORTHO05D006944 1.6e-185 652.9 397 77.8
AagrBONN_evm.TU.Sc2ySwM_228.543 Anthoceros agrestis HOM05D005603 ORTHO05D006944 7.3e-183 644.0 403 76.4
Pp3c10_8990 Physcomitrium patens HOM05D005603 ORTHO05D006944 3.6e-182 641.7 398 76.9
Mapoly0152s0028 Marchantia polymorpha HOM05D005603 ORTHO05D006944 4.1e-170 601.7 404 71.3
HanXRQChr16g0531111 Helianthus annuus HOM05D005603 ORTHO05D006944 1.2e-169 600.1 394 71.6
Aqoxy5G01490 Aquilegia oxysepala HOM05D005603 ORTHO05D006944 1.1e-167 593.6 394 70.8
ECA246G4842 Erigeron canadensis HOM05D005603 ORTHO05D006944 1.5e-167 593.2 396 70.5
COL.COLO4_21962 Corchorus olitorius HOM05D005603 ORTHO05D006944 4.3e-167 591.7 391 70.3
QL06p033966 Quercus lobata HOM05D005603 ORTHO05D006944 7.3e-167 590.9 394 71.1
AUR62007651 Chenopodium quinoa HOM05D005603 ORTHO05D006944 1.2e-166 590.1 394 70.1
Sc03g0003440 Simmondsia chinensis HOM05D005603 ORTHO05D006944 1.2e-166 590.1 394 69.5
Gohir.A02G169100 Gossypium hirsutum HOM05D005603 ORTHO05D006944 1.6e-166 589.7 391 69.8
Hund14030 Selenicereus undatus HOM05D005603 ORTHO05D006944 2.1e-166 589.3 394 68.8
MSTRG.15764 Avicennia marina HOM05D005603 ORTHO05D006944 2.8e-166 589.0 394 69.5
EL10As8g23850 Beta vulgaris HOM05D005603 ORTHO05D006944 2.8e-166 589.0 396 69.4
Gohir.D03G010900 Gossypium hirsutum HOM05D005603 ORTHO05D006944 2.8e-166 589.0 391 69.6
Gorai.003G011300 Gossypium raimondii HOM05D005603 ORTHO05D006944 2.8e-166 589.0 391 69.6
Manes.02G101300 Manihot esculenta HOM05D005603 ORTHO05D006944 2.8e-166 589.0 391 71.1
Mapoly0094s0075 Marchantia polymorpha HOM05D005603 ORTHO05D006944 3.6e-166 588.6 397 71.0
Sopen02g029190 Solanum pennellii HOM05D005603 ORTHO05D006944 8.1e-166 587.4 395 69.4
Thecc.01G023100 Theobroma cacao HOM05D005603 ORTHO05D006944 1.1e-165 587.0 391 70.3
CiPaw.07G056000 Carya illinoinensis HOM05D005603 ORTHO05D006944 1.4e-165 586.6 395 70.9
TPR.G2333 Trifolium pratense HOM05D005603 ORTHO05D006944 2.3e-165 585.9 396 69.2
TWI09G0997 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 2.3e-165 585.9 394 69.3
Eucgr.I02369 Eucalyptus grandis HOM05D005603 ORTHO05D006944 3.1e-165 585.5 394 70.1
Nitab4.5_0008176g0030 Nicotiana tabacum HOM05D005603 ORTHO05D006944 3.1e-165 585.5 410 66.8
Ciclev10025760m.g Citrus clementina HOM05D005603 ORTHO05D006944 4.0e-165 585.1 394 69.0
Glyma.01G168600 Glycine max HOM05D005603 ORTHO05D006944 4.0e-165 585.1 400 69.5
CANSAT01G2298 Cannabis sativa HOM05D005603 ORTHO05D006944 5.2e-165 584.7 391 70.1
MELO3C007885.2 Cucumis melo HOM05D005603 ORTHO05D006944 5.2e-165 584.7 392 69.4
MD15G1249000 Malus domestica HOM05D005603 ORTHO05D006944 5.2e-165 584.7 394 69.3
PSO541G2355 Papaver somniferum HOM05D005603 ORTHO05D006944 5.2e-165 584.7 395 69.4
PSO675G2068 Papaver somniferum HOM05D005603 ORTHO05D006944 5.2e-165 584.7 395 69.4
Nn5g29214 Nelumbo nucifera HOM05D005603 ORTHO05D006944 8.9e-165 583.9 393 69.5
Lsat_1_v5_gn_3_73720 Lactuca sativa HOM05D005603 ORTHO05D006944 1.2e-164 583.6 390 70.0
RcHm_v2.0_Chr2g0099911 Rosa chinensis HOM05D005603 ORTHO05D006944 1.2e-164 583.6 394 69.0
Sed0002868 Sechium edule HOM05D005603 ORTHO05D006944 1.5e-164 583.2 392 69.9
CsaV3_6G046890 Cucumis sativus L. HOM05D005603 ORTHO05D006944 2.0e-164 582.8 392 69.1
Potri.005G117200 Populus trichocarpa HOM05D005603 ORTHO05D006944 2.0e-164 582.8 391 70.8
TAR628G0819 Trochodendron aralioides HOM05D005603 ORTHO05D006944 2.0e-164 582.8 396 68.9
ClCG01G020120 Citrullus lanatus HOM05D005603 ORTHO05D006944 2.6e-164 582.4 392 69.4
GSVIVG01018824001 Vitis vinifera HOM05D005603 ORTHO05D006944 3.4e-164 582.0 393 69.5
Ca_24898_v3 Cicer arietinum L. HOM05D005603 ORTHO05D006944 4.4e-164 581.6 396 68.9
Oeu035330.1 Olea europaea HOM05D005603 ORTHO05D006944 7.5e-164 580.9 395 68.4
DCAR_021493 Daucus carota HOM05D005603 ORTHO05D006944 9.8e-164 580.5 394 68.5
Migut.L00039 Erythranthe guttata HOM05D005603 ORTHO05D006944 9.8e-164 580.5 394 69.3
FvH4_1g12160 Fragaria vesca HOM05D005603 ORTHO05D006944 9.8e-164 580.5 394 68.5
Glyma.11G074800 Glycine max HOM05D005603 ORTHO05D006944 1.3e-163 580.1 400 68.8
Phvul.002G111500 Phaseolus vulgaris HOM05D005603 ORTHO05D006944 1.3e-163 580.1 396 69.4
THA.LOC104819186 Tarenaya hassleriana HOM05D005603 ORTHO05D006944 1.3e-163 580.1 391 68.3
arahy.Tifrunner.gnm1.ann1.V913IW Arachis hypogaea HOM05D005603 ORTHO05D006944 1.7e-163 579.7 400 68.8
TAR376G0194 Trochodendron aralioides HOM05D005603 ORTHO05D006944 1.7e-163 579.7 394 68.0
CSS0040106 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 2.2e-163 579.3 395 68.9
Cc07_g10420 Coffea canephora HOM05D005603 ORTHO05D006944 2.2e-163 579.3 394 68.8
Psat2g155920 Pisum sativum HOM05D005603 ORTHO05D006944 2.2e-163 579.3 396 68.4
Medtr5g021520 Medicago truncatula HOM05D005603 ORTHO05D006944 4.9e-163 578.2 397 68.8
Prupe.7G165200 Prunus persica HOM05D005603 ORTHO05D006944 6.4e-163 577.8 394 68.3
MD02G1111100 Malus domestica HOM05D005603 ORTHO05D006944 1.1e-162 577.0 394 68.3
Duzib147G0771 Durio zibethinus HOM05D005603 ORTHO05D006944 1.4e-162 576.6 390 69.2
SGA_v2.0_scaffold47G17673 Striga asiatica HOM05D005603 ORTHO05D006944 1.9e-162 576.2 401 68.6
CDE05G2538 Ceratophyllum demersum HOM05D005603 ORTHO05D006944 2.4e-162 575.9 395 69.6
Hund16476 Selenicereus undatus HOM05D005603 ORTHO05D006944 3.2e-162 575.5 425 64.7
VMungo1215G2039 Vigna mungo HOM05D005603 ORTHO05D006944 5.4e-162 574.7 400 67.8
ATR0620G128 Amborella trichopoda HOM05D005603 ORTHO05D006944 7.1e-162 574.3 394 69.3
Lj2g0023828 Lotus japonicus HOM05D005603 ORTHO05D006944 1.2e-161 573.5 405 67.9
Potri.007G015800 Populus trichocarpa HOM05D005603 ORTHO05D006944 1.2e-161 573.5 391 69.8
AT3G51130 Arabidopsis thaliana HOM05D005603 ORTHO05D006944 4.6e-161 571.6 391 67.0
Carub.0005s1753 Capsella rubella HOM05D005603 ORTHO05D006944 4.6e-161 571.6 391 67.0
Hma1.2p1_0743F.1_g211450 Hydrangea macrophylla HOM05D005603 ORTHO05D006944 4.6e-161 571.6 406 67.5
Peaxi162Scf00083g01233 Petunia axillaris HOM05D005603 ORTHO05D006944 1.3e-160 570.1 388 68.6
Thhalv10010418m.g Eutrema salsugineum HOM05D005603 ORTHO05D006944 1.7e-160 569.7 391 67.3
CSS0042462 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 2.3e-160 569.3 392 67.6
Os06g0714000 Oryza sativa ssp. japonica HOM05D005603 ORTHO05D006944 2.3e-160 569.3 395 68.9
AL5G31550 Arabidopsis lyrata HOM05D005603 ORTHO05D006944 3.0e-160 568.9 391 67.0
CAN.G358.2 Capsicum annuum HOM05D005603 ORTHO05D006944 3.9e-160 568.5 394 67.0
PGSC0003DMG400003547 Solanum tuberosum HOM05D005603 ORTHO05D006944 1.1e-159 567.0 382 68.8
Nitab4.5_0000912g0020 Nicotiana tabacum HOM05D005603 ORTHO05D006944 2.5e-159 565.8 402 66.7
arahy.Tifrunner.gnm1.ann1.8YZ064 Arachis hypogaea HOM05D005603 ORTHO05D006944 5.6e-159 564.7 429 63.9
BcaC06g33053 Brassica carinata HOM05D005603 ORTHO05D006944 2.1e-158 562.8 391 66.5
CSS0001882 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 2.1e-158 562.8 392 66.6
SalBow8G5567 Salvia bowleyana HOM05D005603 ORTHO05D006944 2.1e-158 562.8 406 66.5
Aa31LG4G19220 Aethionema arabicum HOM05D005603 ORTHO05D006944 2.3e-157 559.3 391 66.5
HPP92_025419 Vanilla planifolia HOM05D005603 ORTHO05D006944 4.0e-157 558.5 396 67.2
Sp5g11080 Schrenkiella parvula HOM05D005603 ORTHO05D006944 5.8e-156 554.7 394 66.5
Sed0017160 Sechium edule HOM05D005603 ORTHO05D006944 1.4e-154 550.1 395 66.1
SMO037G0002 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 1.6e-153 546.6 266 99.6
A03p48150 Brassica napus HOM05D005603 ORTHO05D006944 3.0e-152 542.3 376 66.0
BraA03t13922Z Brassica rapa HOM05D005603 ORTHO05D006944 3.0e-152 542.3 376 66.0
CARHR160730 Cardamine hirsuta HOM05D005603 ORTHO05D006944 8.6e-152 540.8 391 63.7
Rhsim08G0035200 Rhododendron simsii HOM05D005603 ORTHO05D006944 8.6e-152 540.8 407 63.6
FAN28G0526 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.5e-151 540.0 394 65.2
BolC7t45134H Brassica oleracea HOM05D005603 ORTHO05D006944 5.6e-151 538.1 378 65.6
Haze_03808 Corylus avellana HOM05D005603 ORTHO05D006944 8.1e-150 534.3 393 66.4
MSTRG.3829 Avicennia marina HOM05D005603 ORTHO05D006944 1.8e-149 533.1 399 63.2
vmacro22086 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 3.4e-148 528.9 361 67.9
FAN23G1635 Fragaria x ananassa HOM05D005603 ORTHO05D006944 5.8e-148 528.1 389 64.3
SEGI_22640 Sequoiadendron giganteum HOM05D005603 ORTHO05D006944 2.9e-147 525.8 346 72.0
Cpa.g.sc6.214 Carica papaya HOM05D005603 ORTHO05D006944 1.1e-146 523.9 415 63.1
C07p46180 Brassica napus HOM05D005603 ORTHO05D006944 2.4e-146 522.7 399 61.9
BraA09t39879Z Brassica rapa HOM05D005603 ORTHO05D006944 6.0e-145 518.1 377 63.7
A09p44190 Brassica napus HOM05D005603 ORTHO05D006944 1.3e-144 516.9 377 63.4
BolC8t50258H Brassica oleracea HOM05D005603 ORTHO05D006944 2.3e-144 516.2 377 63.7
BcaB01g00547 Brassica carinata HOM05D005603 ORTHO05D006944 3.9e-144 515.4 376 64.1
FAN19G0288 Fragaria x ananassa HOM05D005603 ORTHO05D006944 3.9e-144 515.4 379 64.6
TWI53G1238 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 1.1e-143 513.8 359 66.3
unitig_32.g11821 Utricularia gibba HOM05D005603 ORTHO05D006944 3.3e-143 512.3 378 64.8
Zm00001eb227930 Zea mays HOM05D005603 ORTHO05D006944 5.6e-143 511.5 395 63.3
Sabra05G0096200 Salix brachista HOM05D005603 ORTHO05D006944 3.1e-141 505.8 400 63.2
FAN26G2705 Fragaria x ananassa HOM05D005603 ORTHO05D006944 9.0e-141 504.2 372 64.5
C08p26410 Brassica napus HOM05D005603 ORTHO05D006944 3.2e-138 495.7 357 64.4
Sabra07G0013000 Salix brachista HOM05D005603 ORTHO05D006944 2.1e-137 493.0 392 63.3
Lj4C215G4 Lonicera japonica HOM05D005603 ORTHO05D006944 2.7e-137 492.7 401 61.1
vmacro18394 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 4.6e-137 491.9 345 66.7
Duzib264G0505 Durio zibethinus HOM05D005603 ORTHO05D006944 5.1e-136 488.4 391 61.4
Ah.02g124640 Amaranthus hybridus HOM05D005603 ORTHO05D006944 3.8e-131 472.2 387 61.0
Lalb_Chr16g0377611 Lupinus albus HOM05D005603 ORTHO05D006944 7.1e-130 468.0 327 67.0
Dinv40059 Davidia involucrata HOM05D005603 ORTHO05D006944 3.7e-126 455.7 308 70.5
Dinv33602 Davidia involucrata HOM05D005603 ORTHO05D006944 2.4e-125 453.0 309 69.9
Actinidia31012 Actinidia chinensis HOM05D005603 ORTHO05D006944 2.1e-121 439.9 309 69.3
Lalb_Chr09g0321921 Lupinus albus HOM05D005603 ORTHO05D006944 2.3e-96 356.7 245 68.6
Solyc02g075630.3 Solanum lycopersicum HOM05D005603 ORTHO05D006944 1.0e-83 314.7 207 71.5
CBR_g36682 Chara braunii HOM05D005603 ORTHO05D000002 6.5e-83 312.0 229 63.8
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 5.5e-82 308.9 436 42.4
Atru.chr3.766 Acer truncatum HOM05D005603 ORTHO05D006944 2.5e-74 283.5 187 70.6
Nn015s41468 Nelumbo nucifera HOM05D005603 ORTHO05D006944 3.3e-66 256.5 175 69.7
CBR_g36680 Chara braunii HOM05D005603 ORTHO05D006944 1.0e-64 251.5 171 66.7
Migut.H02480 Erythranthe guttata HOM05D005603 ORTHO05D006944 2.3e-64 250.4 373 41.6
Actinidia26078 Actinidia chinensis HOM05D005603 ORTHO05D006944 1.5e-58 231.1 245 51.0
Lalb_Chr09g0321931 Lupinus albus HOM05D005603 ORTHO05D006944 1.5e-58 231.1 149 69.1
Nn015s41469 Nelumbo nucifera HOM05D005603 ORTHO05D006944 2.4e-53 213.8 150 67.3
BcaC06g33054 Brassica carinata HOM05D005603 ORTHO05D006944 1.0e-51 208.4 141 67.4
Atru.chr2.40 Acer truncatum HOM05D005603 ORTHO05D006944 1.3e-27 128.3 196 38.3
Actinidia31013 Actinidia chinensis HOM05D005603 ORTHO05D006944 2.1e-20 104.4 72 61.1
Cfa027245 Carpinus fangiana HOM05D005603 ORTHO05D006944 4.9e-14 83.2 280 26.1
RcHm_v2.0_Chr7g0231521 Rosa chinensis HOM05D005603 ORTHO05D006944 1.1e-10 72.0 208 28.4


User provided reference genes

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