Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0139 Selaginella moellendorffii HOM05D004717 ORTHO05D005636 4.1e-107 391.3 190 100.0
Cc11_g03470 Coffea canephora HOM05D004717 ORTHO05D005636 9.9e-61 237.3 187 59.4
Gorai.008G146900 Gossypium raimondii HOM05D004717 ORTHO05D005636 9.9e-61 237.3 187 57.8
Gohir.D12G135700 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.7e-60 236.5 177 59.9
Gohir.A12G132100 Gossypium hirsutum HOM05D004717 ORTHO05D005636 2.2e-60 236.1 187 57.8
Thecc.02G155400 Theobroma cacao HOM05D004717 ORTHO05D005636 2.9e-60 235.7 187 57.8
VMungo0464G0417 Vigna mungo HOM05D004717 ORTHO05D005636 2.9e-60 235.7 187 59.4
QL04p036080 Quercus lobata HOM05D004717 ORTHO05D005636 8.4e-60 234.2 186 58.1
RcHm_v2.0_Chr4g0446911 Rosa chinensis HOM05D004717 ORTHO05D005636 1.1e-59 233.8 187 57.2
FAN12G1282 Fragaria x ananassa HOM05D004717 ORTHO05D005636 1.9e-59 233.0 187 57.2
Prupe.1G348900 Prunus persica HOM05D004717 ORTHO05D005636 2.4e-59 232.6 187 57.2
AUR62012906 Chenopodium quinoa HOM05D004717 ORTHO05D005636 3.2e-59 232.3 187 55.6
GSVIVG01038782001 Vitis vinifera HOM05D004717 ORTHO05D005636 3.2e-59 232.3 187 57.2
Ah.01g024100 Amaranthus hybridus HOM05D004717 ORTHO05D005636 5.4e-59 231.5 187 56.7
unitig_8.g3169 Utricularia gibba HOM05D004717 ORTHO05D005636 5.4e-59 231.5 189 58.2
Lj6P708T54 Lonicera japonica HOM05D004717 ORTHO05D005636 7.1e-59 231.1 187 57.2
MD16G1003900 Malus domestica HOM05D004717 ORTHO05D005636 7.1e-59 231.1 187 56.7
Duzib132G0983 Durio zibethinus HOM05D004717 ORTHO05D005636 9.3e-59 230.7 187 56.1
Nitab4.5_0004979g0110 Nicotiana tabacum HOM05D004717 ORTHO05D005636 1.2e-58 230.3 187 57.8
QL04p036464 Quercus lobata HOM05D004717 ORTHO05D005636 1.2e-58 230.3 185 57.3
MSTRG.7889 Avicennia marina HOM05D004717 ORTHO05D005636 1.6e-58 229.9 187 57.2
Nn2g12497 Nelumbo nucifera HOM05D004717 ORTHO05D005636 1.6e-58 229.9 189 53.4
MD13G1003500 Malus domestica HOM05D004717 ORTHO05D005636 2.1e-58 229.6 187 55.1
DCAR_027608 Daucus carota HOM05D004717 ORTHO05D005636 2.7e-58 229.2 179 56.4
Oeu033041.1 Olea europaea HOM05D004717 ORTHO05D005636 2.7e-58 229.2 187 56.7
Lj6P714T12 Lonicera japonica HOM05D004717 ORTHO05D005636 3.5e-58 228.8 177 59.3
GSVIVG01038778001 Vitis vinifera HOM05D004717 ORTHO05D005636 3.5e-58 228.8 187 56.7
Glyma.16G218800 Glycine max HOM05D004717 ORTHO05D005636 4.6e-58 228.4 187 57.8
Manes.08G039100 Manihot esculenta HOM05D004717 ORTHO05D005636 4.6e-58 228.4 187 56.7
CANSAT11G2572 Cannabis sativa HOM05D004717 ORTHO05D005636 7.8e-58 227.6 177 59.3
CiPaw.06G062200 Carya illinoinensis HOM05D004717 ORTHO05D005636 7.8e-58 227.6 187 56.7
PGR142G2311 Punica granatum HOM05D004717 ORTHO05D005636 7.8e-58 227.6 187 54.0
Atru.chr11.1095 Acer truncatum HOM05D004717 ORTHO05D005636 1.0e-57 227.3 187 54.0
Rhsim02G0075200 Rhododendron simsii HOM05D004717 ORTHO05D005636 1.0e-57 227.3 187 55.6
Sed0025396 Sechium edule HOM05D004717 ORTHO05D005636 1.3e-57 226.9 187 56.1
MELO3C022525.2 Cucumis melo HOM05D004717 ORTHO05D005636 1.7e-57 226.5 187 55.6
THA.LOC104800704 Tarenaya hassleriana HOM05D004717 ORTHO05D005636 1.7e-57 226.5 187 54.5
Aqoxy6G00094 Aquilegia oxysepala HOM05D004717 ORTHO05D005636 2.3e-57 226.1 187 54.5
CsaV3_6G005870 Cucumis sativus L. HOM05D004717 ORTHO05D005636 2.3e-57 226.1 187 55.6
Dinv02673 Davidia involucrata HOM05D004717 ORTHO05D005636 2.3e-57 226.1 187 57.2
arahy.Tifrunner.gnm1.ann1.TS1LPS Arachis hypogaea HOM05D004717 ORTHO05D005636 3.9e-57 225.3 187 56.1
CiPaw.05G171400 Carya illinoinensis HOM05D004717 ORTHO05D005636 3.9e-57 225.3 187 55.6
Sed0013821 Sechium edule HOM05D004717 ORTHO05D005636 3.9e-57 225.3 187 54.5
Nitab4.5_0004808g0010 Nicotiana tabacum HOM05D004717 ORTHO05D005636 6.6e-57 224.6 185 56.8
CDE02G0493 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 8.7e-57 224.2 187 54.0
Gohir.A11G227800 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.1e-56 223.8 175 56.6
Gohir.D11G240300 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.1e-56 223.8 175 56.6
Gorai.007G253700 Gossypium raimondii HOM05D004717 ORTHO05D005636 1.1e-56 223.8 175 56.6
PSO782G0831 Papaver somniferum HOM05D004717 ORTHO05D005636 1.1e-56 223.8 187 54.5
SHI07248 Sapria himalayana HOM05D004717 ORTHO05D005636 1.1e-56 223.8 187 55.6
Solyc04g009010.2 Solanum lycopersicum HOM05D004717 ORTHO05D005636 1.1e-56 223.8 187 55.6
Peaxi162Scf00681g00024 Petunia axillaris HOM05D004717 ORTHO05D005636 1.5e-56 223.4 187 55.6
Oeu003437.1 Olea europaea HOM05D004717 ORTHO05D005636 1.9e-56 223.0 187 54.0
Phvul.004G144800 Phaseolus vulgaris HOM05D004717 ORTHO05D005636 1.9e-56 223.0 187 56.7
arahy.Tifrunner.gnm1.ann1.8YZR55 Arachis hypogaea HOM05D004717 ORTHO05D005636 2.5e-56 222.6 187 55.6
CSS0046676 Camellia sinensis var. sinensis HOM05D004717 ORTHO05D005636 2.5e-56 222.6 187 56.7
CiPaw.05G171500 Carya illinoinensis HOM05D004717 ORTHO05D005636 2.5e-56 222.6 188 56.4
Haze_11783 Corylus avellana HOM05D004717 ORTHO05D005636 2.5e-56 222.6 187 55.1
Eucgr.G02601 Eucalyptus grandis HOM05D004717 ORTHO05D005636 2.5e-56 222.6 187 55.1
CAN.G274.13 Capsicum annuum HOM05D004717 ORTHO05D005636 3.3e-56 222.2 186 56.5
SGA_v2.0_scaffold8G04231 Striga asiatica HOM05D004717 ORTHO05D005636 3.3e-56 222.2 187 54.0
SGA_v2.0_scaffold62G21625 Striga asiatica HOM05D004717 ORTHO05D005636 4.3e-56 221.9 185 53.5
EL10Ac9g21225 Beta vulgaris HOM05D004717 ORTHO05D005636 5.6e-56 221.5 187 52.4
Hma1.2p1_0513F.1_g169470 Hydrangea macrophylla HOM05D004717 ORTHO05D005636 5.6e-56 221.5 186 57.0
Pp3c3_35430 Physcomitrium patens HOM05D004717 ORTHO05D005636 5.6e-56 221.5 187 54.5
PGSC0003DMG400011510 Solanum tuberosum HOM05D004717 ORTHO05D005636 5.6e-56 221.5 187 55.1
Sc17g0002110 Simmondsia chinensis HOM05D004717 ORTHO05D005636 7.3e-56 221.1 187 55.1
TWI74G1267 Tripterygium wilfordii HOM05D004717 ORTHO05D005636 7.3e-56 221.1 187 52.9
ECA247G4036 Erigeron canadensis HOM05D004717 ORTHO05D005636 9.6e-56 220.7 187 55.6
Thecc.05G241200 Theobroma cacao HOM05D004717 ORTHO05D005636 9.6e-56 220.7 189 54.5
GSVIVG01026135001 Vitis vinifera HOM05D004717 ORTHO05D005636 9.6e-56 220.7 187 55.1
vmacro15638 Vaccinium macrocarpon HOM05D004717 ORTHO05D005636 1.3e-55 220.3 187 54.0
AUR62001133 Chenopodium quinoa HOM05D004717 ORTHO05D005636 2.1e-55 219.5 187 55.1
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 2.8e-55 219.2 186 52.7
Lj5g0015714 Lotus japonicus HOM05D004717 ORTHO05D005636 3.6e-55 218.8 187 54.5
Ah.08g214600 Amaranthus hybridus HOM05D004717 ORTHO05D005636 4.8e-55 218.4 187 55.1
Potri.005G089500 Populus trichocarpa HOM05D004717 ORTHO05D005636 4.8e-55 218.4 187 54.5
PGR142G4258 Punica granatum HOM05D004717 ORTHO05D005636 4.8e-55 218.4 187 52.9
EL10Ac7g17906 Beta vulgaris HOM05D004717 ORTHO05D005636 6.2e-55 218.0 187 55.6
Sc08g0003750 Simmondsia chinensis HOM05D004717 ORTHO05D005636 6.2e-55 218.0 187 54.0
Carub.0006s0723 Capsella rubella HOM05D004717 ORTHO05D005636 8.1e-55 217.6 187 53.5
Duzib177G0848 Durio zibethinus HOM05D004717 ORTHO05D005636 8.1e-55 217.6 189 54.0
Lj2g0014996 Lotus japonicus HOM05D004717 ORTHO05D005636 8.1e-55 217.6 187 55.1
Eucgr.G02666 Eucalyptus grandis HOM05D004717 ORTHO05D005636 1.1e-54 217.2 187 56.1
Lj3g0022258 Lotus japonicus HOM05D004717 ORTHO05D005636 1.4e-54 216.9 187 55.6
Lsat_1_v5_gn_9_25720 Lactuca sativa HOM05D004717 ORTHO05D005636 1.8e-54 216.5 187 52.4
HanXRQChr08g0237151 Helianthus annuus HOM05D004717 ORTHO05D005636 3.1e-54 215.7 187 53.5
TPR.G9035 Trifolium pratense HOM05D004717 ORTHO05D005636 3.1e-54 215.7 187 55.1
AT5G08335 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 4.0e-54 215.3 187 51.9
ClCG06G000120 Citrullus lanatus HOM05D004717 ORTHO05D005636 5.3e-54 214.9 184 54.3
Migut.L01402 Erythranthe guttata HOM05D004717 ORTHO05D005636 5.3e-54 214.9 187 53.5
CARHR204740 Cardamine hirsuta HOM05D004717 ORTHO05D005636 6.9e-54 214.5 187 51.9
Lalb_Chr16g0386851 Lupinus albus HOM05D004717 ORTHO05D005636 9.0e-54 214.2 185 52.4
Duzib106G0072 Durio zibethinus HOM05D004717 ORTHO05D005636 1.2e-53 213.8 189 51.3
Thhalv10014725m.g Eutrema salsugineum HOM05D004717 ORTHO05D005636 1.2e-53 213.8 187 51.9
AL6G34580 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 1.5e-53 213.4 189 51.3
Lalb_Chr24g0398391 Lupinus albus HOM05D004717 ORTHO05D005636 2.0e-53 213.0 187 54.0
MBI14_g08135_MAGBIO Magnolia biondii HOM05D004717 ORTHO05D005636 3.4e-53 212.2 185 54.1
Lj3P847T27 Lonicera japonica HOM05D004717 ORTHO05D005636 4.4e-53 211.8 177 58.2
Potri.007G074500 Populus trichocarpa HOM05D004717 ORTHO05D005636 4.4e-53 211.8 187 51.9
Ciclev10016775m.g Citrus clementina HOM05D004717 ORTHO05D005636 5.8e-53 211.5 187 50.8
Sabra07G0063200 Salix brachista HOM05D004717 ORTHO05D005636 7.6e-53 211.1 187 51.9
TPR.G28016 Trifolium pratense HOM05D004717 ORTHO05D005636 7.6e-53 211.1 187 54.5
HPP92_018371 Vanilla planifolia HOM05D004717 ORTHO05D005636 9.9e-53 210.7 187 51.3
AL6G18770 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 1.7e-52 209.9 187 50.8
AT5G23320 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 1.7e-52 209.9 189 51.3
Medtr6g075160 Medicago truncatula HOM05D004717 ORTHO05D005636 2.9e-52 209.1 187 52.9
Psat1g123480 Pisum sativum HOM05D004717 ORTHO05D005636 8.4e-52 207.6 187 52.9
Carub.0006s2109 Capsella rubella HOM05D004717 ORTHO05D005636 7.1e-51 204.5 189 48.1
Migut.E00157 Erythranthe guttata HOM05D004717 ORTHO05D005636 1.2e-50 203.8 177 53.1
Lsat_1_v5_gn_5_170960 Lactuca sativa HOM05D004717 ORTHO05D005636 1.6e-50 203.4 187 51.9
CARHR190220 Cardamine hirsuta HOM05D004717 ORTHO05D005636 4.6e-50 201.8 187 48.1
BcaB01g05612 Brassica carinata HOM05D004717 ORTHO05D005636 1.3e-49 200.3 187 48.1
HanXRQChr01g0011051 Helianthus annuus HOM05D004717 ORTHO05D005636 1.7e-49 199.9 187 49.7
C03p04250 Brassica napus HOM05D004717 ORTHO05D005636 2.3e-49 199.5 187 47.6
BolC3t12957H Brassica oleracea HOM05D004717 ORTHO05D005636 2.3e-49 199.5 187 47.6
BraA03t09724Z Brassica rapa HOM05D004717 ORTHO05D005636 5.1e-49 198.4 187 47.6
ATR0580G192 Amborella trichopoda HOM05D004717 ORTHO05D005636 8.7e-49 197.6 144 59.7
A03p03770 Brassica napus HOM05D004717 ORTHO05D005636 1.1e-48 197.2 185 47.6
AUR62011721 Chenopodium quinoa HOM05D004717 ORTHO05D005636 7.3e-48 194.5 143 58.0
Mapoly0062s0094 Marchantia polymorpha HOM05D004717 ORTHO05D005636 7.3e-48 194.5 187 51.3
DCAR_023472 Daucus carota HOM05D004717 ORTHO05D005636 6.9e-46 188.0 144 58.3
Cpa.g.sc59.26 Carica papaya HOM05D004717 ORTHO05D005636 5.8e-45 184.9 187 49.2
Actinidia35903 Actinidia chinensis HOM05D004717 ORTHO05D005636 4.9e-44 181.8 177 48.6
Sp6g34610 Schrenkiella parvula HOM05D004717 ORTHO05D005636 2.4e-43 179.5 169 48.5
Aa31LG11G2780 Aethionema arabicum HOM05D004717 ORTHO05D005636 1.2e-42 177.2 144 53.5
PSO170G2864 Papaver somniferum HOM05D004717 ORTHO05D005636 7.9e-42 174.5 156 51.3
Zm00001eb144100 Zea mays HOM05D004717 ORTHO05D005636 1.1e-40 170.6 147 52.4
CDE04G3142 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 1.5e-40 170.2 156 50.0
MCO05G386 Micromonas commoda HOM05D004717 ORTHO05D005636 1.9e-40 169.9 190 44.7
Sopen04g004190 Solanum pennellii HOM05D004717 ORTHO05D005636 4.5e-37 158.7 114 61.4
HanXRQChr17g0556721 Helianthus annuus HOM05D004717 ORTHO05D005636 1.1e-35 154.1 134 51.5
PRCOL_00002165 Prasinoderma coloniale HOM05D004717 ORTHO05D005636 3.2e-35 152.5 182 46.7
Rhsim02G0074800 Rhododendron simsii HOM05D004717 ORTHO05D005636 9.3e-35 151.0 187 42.8
Haze_27496 Corylus avellana HOM05D004717 ORTHO05D005636 1.3e-33 147.1 184 42.4
COL.COLO4_20086 Corchorus olitorius HOM05D004717 ORTHO05D005636 1.5e-32 143.7 95 65.3
Cfa021666 Carpinus fangiana HOM05D004717 ORTHO05D005636 1.7e-28 130.2 182 41.2
Glyma.09G169200 Glycine max HOM05D004717 ORTHO05D005636 5.0e-28 128.6 187 40.1
SalBow2G2042 Salvia bowleyana HOM05D004717 ORTHO05D005636 5.0e-28 128.6 177 42.9
SEGI_39005 Sequoiadendron giganteum HOM05D004717 ORTHO05D005636 3.0e-25 119.4 73 67.1
TAR381G0283 Trochodendron aralioides HOM05D004717 ORTHO05D005636 8.7e-25 117.9 113 51.3
AagrBONN_evm.TU.Sc2ySwM_344.2327 Anthoceros agrestis HOM05D004717 ORTHO05D005636 5.3e-22 108.6 113 50.4
ECA247G3377 Erigeron canadensis HOM05D004717 ORTHO05D005636 4.5e-21 105.5 68 69.1
AagrBONN_evm.TU.Sc2ySwM_117.4144 Anthoceros agrestis HOM05D004717 ORTHO05D005636 5.0e-20 102.1 126 46.0
Hund05579 Selenicereus undatus HOM05D004717 ORTHO05D005636 5.7e-16 88.6 106 44.3
Ca_23673_v3 Cicer arietinum L. HOM05D004717 ORTHO05D005636 3.1e-14 82.8 120 40.0
Os04g0602900 Oryza sativa ssp. japonica HOM05D004717 ORTHO05D005636 4.2e-11 72.4 70 45.7
RhsimUnG0160700 Rhododendron simsii HOM05D004717 ORTHO05D005636 4.2e-11 72.4 58 53.4
Eucgr.D01405 Eucalyptus grandis HOM05D004717 ORTHO05D005636 3.6e-10 69.3 63 49.2
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 1.8e-09 67.0 183 27.9
Cre01.g018184 Chlamydomonas reinhardtii HOM05D004717 ORTHO05D005636 4.4e-08 62.4 69 47.8


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