Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0135 Selaginella moellendorffii HOM05D007236 ORTHO05D009150 3.8e-191 671.4 355 100.0
Medtr4g005300 Medicago truncatula HOM05D007236 ORTHO05D009150 1.5e-70 270.8 324 47.5
Eucgr.J03184 Eucalyptus grandis HOM05D007236 ORTHO05D009150 2.0e-70 270.4 329 48.9
SEGI_39602 Sequoiadendron giganteum HOM05D007236 ORTHO05D009150 4.4e-70 269.2 358 44.4
Dinv20327 Davidia involucrata HOM05D007236 ORTHO05D009150 7.5e-70 268.5 326 47.5
Psat7g265040 Pisum sativum HOM05D007236 ORTHO05D009150 7.5e-70 268.5 323 47.4
SGA_v2.0_scaffold71G23973 Striga asiatica HOM05D007236 ORTHO05D009150 7.5e-70 268.5 338 45.3
GSVIVG01029561001 Vitis vinifera HOM05D007236 ORTHO05D009150 7.5e-70 268.5 326 46.9
arahy.Tifrunner.gnm1.ann1.I3AU87 Arachis hypogaea HOM05D007236 ORTHO05D009150 9.8e-70 268.1 325 48.0
arahy.Tifrunner.gnm1.ann1.QM8PPU Arachis hypogaea HOM05D007236 ORTHO05D009150 1.3e-69 267.7 325 48.0
AUR62025709 Chenopodium quinoa HOM05D007236 ORTHO05D009150 1.7e-69 267.3 325 48.0
Manes.06G179100 Manihot esculenta HOM05D007236 ORTHO05D009150 1.7e-69 267.3 331 47.1
FAN14G0281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 3.7e-69 266.2 324 46.6
Actinidia31123 Actinidia chinensis HOM05D007236 ORTHO05D009150 4.8e-69 265.8 331 46.5
Ca_20979_v3 Cicer arietinum L. HOM05D007236 ORTHO05D009150 4.8e-69 265.8 327 47.1
PGR031G2337 Punica granatum HOM05D007236 ORTHO05D009150 4.8e-69 265.8 328 47.3
THA.LOC104812331 Tarenaya hassleriana HOM05D007236 ORTHO05D009150 4.8e-69 265.8 356 46.1
FAN09G1281 Fragaria x ananassa HOM05D007236 ORTHO05D009150 1.1e-68 264.6 324 46.9
Potri.008G003800 Populus trichocarpa HOM05D007236 ORTHO05D009150 1.1e-68 264.6 328 46.0
TAR636G0504 Trochodendron aralioides HOM05D007236 ORTHO05D009150 2.4e-68 263.5 325 46.5
CDE05G3570 Ceratophyllum demersum HOM05D007236 ORTHO05D008204 3.1e-68 263.1 323 48.9
FvH4_6g36830 Fragaria vesca HOM05D007236 ORTHO05D009150 7.0e-68 261.9 324 46.0
Lj3g0020822 Lotus japonicus HOM05D007236 ORTHO05D009150 7.0e-68 261.9 327 47.7
Sabra08G0001500 Salix brachista HOM05D007236 ORTHO05D009150 7.0e-68 261.9 332 45.2
Duzib160G0063 Durio zibethinus HOM05D007236 ORTHO05D009150 9.1e-68 261.5 324 47.2
ClCG07G014680 Citrullus lanatus HOM05D007236 ORTHO05D009150 1.2e-67 261.2 348 43.4
Gohir.A06G116300 Gossypium hirsutum HOM05D007236 ORTHO05D009150 1.2e-67 261.2 325 44.9
Zm00001eb305180 Zea mays HOM05D007236 ORTHO05D009150 1.2e-67 261.2 326 46.3
MELO3C026715.2 Cucumis melo HOM05D007236 ORTHO05D009150 1.6e-67 260.8 352 44.0
VMungo0331G1697 Vigna mungo HOM05D007236 ORTHO05D009150 1.6e-67 260.8 326 46.0
CsaV3_3G030460 Cucumis sativus L. HOM05D007236 ORTHO05D009150 2.0e-67 260.4 352 43.8
Glyma.08G225400 Glycine max HOM05D007236 ORTHO05D009150 2.0e-67 260.4 351 44.7
Aqoxy5G00022 Aquilegia oxysepala HOM05D007236 ORTHO05D009150 2.7e-67 260.0 324 46.9
MD09G1166500 Malus domestica HOM05D007236 ORTHO05D009150 2.7e-67 260.0 327 45.9
Nn5g27081 Nelumbo nucifera HOM05D007236 ORTHO05D009150 3.5e-67 259.6 326 47.5
Thecc.06G055000 Theobroma cacao HOM05D007236 ORTHO05D009150 7.7e-67 258.5 327 46.2
TWI18G0405 Tripterygium wilfordii HOM05D007236 ORTHO05D009150 7.7e-67 258.5 328 44.8
HanXRQChr10g0311241 Helianthus annuus HOM05D007236 ORTHO05D009150 1.0e-66 258.1 326 46.3
RcHm_v2.0_Chr2g0149221 Rosa chinensis HOM05D007236 ORTHO05D009150 1.0e-66 258.1 324 46.0
Hund05669 Selenicereus undatus HOM05D007236 ORTHO05D009150 1.3e-66 257.7 329 46.5
Prupe.3G024200 Prunus persica HOM05D007236 ORTHO05D009150 1.7e-66 257.3 327 45.0
Sopen03g041760 Solanum pennellii HOM05D007236 ORTHO05D009150 2.3e-66 256.9 327 45.9
Solyc03g124030.4 Solanum lycopersicum HOM05D007236 ORTHO05D009150 3.8e-66 256.1 327 45.9
Gorai.010G141500 Gossypium raimondii HOM05D007236 ORTHO05D009150 5.0e-66 255.8 335 43.9
Lsat_1_v5_gn_5_137160 Lactuca sativa HOM05D007236 ORTHO05D009150 6.6e-66 255.4 324 45.1
QL05p088536 Quercus lobata HOM05D007236 ORTHO05D009150 8.6e-66 255.0 324 45.7
Sed0012172 Sechium edule HOM05D007236 ORTHO05D009150 1.9e-65 253.8 349 42.4
Cc04_g00020 Coffea canephora HOM05D007236 ORTHO05D009150 9.5e-65 251.5 323 45.5
CARHR072510 Cardamine hirsuta HOM05D007236 ORTHO05D009150 3.6e-64 249.6 326 45.1
FAN05G3464 Fragaria x ananassa HOM05D007236 ORTHO05D009150 3.6e-64 249.6 313 46.0
TPR.G38815 Trifolium pratense HOM05D007236 ORTHO05D009150 6.1e-64 248.8 334 46.1
Aa31LG4G2080 Aethionema arabicum HOM05D007236 ORTHO05D009150 1.0e-63 248.1 356 42.4
ECA234G1409 Erigeron canadensis HOM05D007236 ORTHO05D009150 1.0e-63 248.1 326 45.1
Sp5g33940 Schrenkiella parvula HOM05D007236 ORTHO05D009150 1.4e-63 247.7 324 44.1
BcaB02g07186 Brassica carinata HOM05D007236 ORTHO05D009150 2.3e-63 246.9 327 44.3
Carub.0002s2575 Capsella rubella HOM05D007236 ORTHO05D009150 5.2e-63 245.7 332 43.1
AL2G39340 Arabidopsis lyrata HOM05D007236 ORTHO05D009150 2.0e-62 243.8 324 43.8
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 2.0e-62 243.8 328 44.2
DCAR_016079 Daucus carota HOM05D007236 ORTHO05D009150 7.5e-62 241.9 324 44.8
Glyma.07G001600 Glycine max HOM05D007236 ORTHO05D009150 7.5e-62 241.9 351 41.6
unitig_32.g11550 Utricularia gibba HOM05D007236 ORTHO05D009150 7.5e-62 241.9 336 41.1
AT1G78915 Arabidopsis thaliana HOM05D007236 ORTHO05D009150 9.8e-62 241.5 344 41.3
A07p27420 Brassica napus HOM05D007236 ORTHO05D009150 9.8e-62 241.5 326 43.6
Mapoly0075s0045 Marchantia polymorpha HOM05D007236 ORTHO05D009150 1.3e-61 241.1 328 44.2
ATR0215G005 Amborella trichopoda HOM05D007236 ORTHO05D009150 2.8e-61 240.0 306 46.1
Oeu039939.2 Olea europaea HOM05D007236 ORTHO05D009150 1.1e-60 238.0 343 42.0
C06p30340 Brassica napus HOM05D007236 ORTHO05D009150 3.2e-60 236.5 336 43.2
BolC6t38197H Brassica oleracea HOM05D007236 ORTHO05D009150 7.0e-60 235.3 339 42.8
COL.COLO4_31136 Corchorus olitorius HOM05D007236 ORTHO05D009150 5.0e-58 229.2 325 43.1
Sc12g0011240 Simmondsia chinensis HOM05D000518 ORTHO05D000737 5.0e-58 229.2 278 47.5
Pp3c5_19050 Physcomitrium patens HOM05D007236 ORTHO05D009150 1.1e-57 228.0 332 42.5
AUR62001326 Chenopodium quinoa HOM05D007236 ORTHO05D009150 9.5e-57 224.9 337 42.1
Migut.I01208 Erythranthe guttata HOM05D007236 ORTHO05D009150 8.0e-56 221.9 326 41.4
AagrBONN_evm.TU.Sc2ySwM_117.3884 Anthoceros agrestis HOM05D007236 ORTHO05D009150 1.0e-55 221.5 351 39.9
BraA07t30383Z Brassica rapa HOM05D007236 ORTHO05D009150 2.6e-54 216.9 350 40.0
vmacro12583 Vaccinium macrocarpon HOM05D007236 ORTHO05D009150 1.1e-52 211.5 323 41.8
Lalb_Chr01g0011631 Lupinus albus HOM05D007236 ORTHO05D009150 3.2e-52 209.9 229 50.7
Gohir.D06G121200 Gossypium hirsutum HOM05D007236 ORTHO05D009150 4.1e-52 209.5 250 45.6
Sc12g0011350 Simmondsia chinensis HOM05D007236 ORTHO05D009150 9.2e-52 208.4 254 46.5
CAN.G790.6 Capsicum annuum HOM05D007236 ORTHO05D009150 2.1e-48 197.2 216 50.0
Peaxi162Scf00038g02668 Petunia axillaris HOM05D007236 ORTHO05D009150 9.8e-46 188.3 302 38.1
Haze_16198 Corylus avellana HOM05D007236 ORTHO05D009150 1.7e-45 187.6 268 43.7
MSTRG.22498 Avicennia marina HOM05D007236 ORTHO05D009150 3.7e-45 186.4 340 36.2
Thhalv10018805m.g Eutrema salsugineum HOM05D007236 ORTHO05D009150 5.1e-42 176.0 323 37.5
PSO170G4015 Papaver somniferum HOM05D007236 ORTHO05D009150 1.2e-38 164.9 354 33.3
PSO357G0009 Papaver somniferum HOM05D007236 ORTHO05D009150 4.4e-38 162.9 324 34.0
Rhsim02G0000100 Rhododendron simsii HOM05D007236 ORTHO05D009150 2.2e-37 160.6 413 31.0
PRCOL_00005889 Prasinoderma coloniale HOM05D007236 ORTHO05D009150 3.2e-36 156.8 246 41.5
FAN02G2413 Fragaria x ananassa HOM05D007236 ORTHO05D009150 4.7e-32 142.9 314 32.8
CiPaw.01G207800 Carya illinoinensis HOM05D007236 ORTHO05D009150 8.1e-32 142.1 245 38.0
Atru.chr1.2627 Acer truncatum HOM05D007236 ORTHO05D009150 4.0e-31 139.8 152 51.3
Ciclev10013942m.g Citrus clementina HOM05D007236 ORTHO05D009150 2.2e-29 134.0 188 43.6
Lj9A543T71 Lonicera japonica HOM05D007236 ORTHO05D009150 1.6e-27 127.9 188 39.4
Nitab4.5_0000499g0120 Nicotiana tabacum HOM05D007236 ORTHO05D009150 1.7e-26 124.4 85 67.1
Cpa.g.sc176.15 Carica papaya HOM05D007236 ORTHO05D009150 5.6e-25 119.4 208 40.4
Ciclev10013945m.g Citrus clementina HOM05D007236 ORTHO05D009150 7.3e-25 119.0 127 50.4
Cre12.g554103 Chlamydomonas reinhardtii HOM05D007236 ORTHO05D009150 1.3e-24 118.2 342 30.1
EL10Ac7g18131 Beta vulgaris HOM05D007236 ORTHO05D009150 3.4e-22 110.2 204 38.7
Atru.chr1.2630 Acer truncatum HOM05D007236 ORTHO05D009150 3.8e-21 106.7 138 44.2
MCO09G516 Micromonas commoda HOM05D007236 ORTHO05D009150 6.4e-21 105.9 371 28.6
Lj9A543T70 Lonicera japonica HOM05D007236 ORTHO05D009150 4.6e-19 99.8 108 50.0
CANSAT01G0299 Cannabis sativa HOM05D007236 ORTHO05D009150 1.9e-17 94.4 103 49.5
CSS0013667 Camellia sinensis var. sinensis HOM05D007236 ORTHO05D009150 1.8e-10 71.2 87 44.8
EL10Ac2g03245 Beta vulgaris HOM05D001509 ORTHO05D001361 1.8e-07 61.2 291 23.4
Aqoxy4G03054 Aquilegia oxysepala HOM05D001509 ORTHO05D001361 6.9e-07 59.3 230 26.1
COL.COLO4_14876 Corchorus olitorius HOM05D001509 ORTHO05D001361 6.9e-07 59.3 287 24.4
AagrBONN_evm.TU.Sc2ySwM_117.1754 Anthoceros agrestis HOM05D001509 ORTHO05D001361 2.0e-06 57.8 212 22.6
THA.LOC104823250 Tarenaya hassleriana HOM05D001509 ORTHO05D001361 2.0e-06 57.8 231 23.4
TWI74G0580 Tripterygium wilfordii HOM05D001509 ORTHO05D001361 2.0e-06 57.8 270 23.0
Rhsim04G0153100 Rhododendron simsii HOM05D001509 ORTHO05D001361 3.4e-06 57.0 250 23.6
Mapoly0157s0006 Marchantia polymorpha HOM05D001509 ORTHO05D001361 4.5e-06 56.6 208 24.5
Sp6g39930 Schrenkiella parvula HOM05D001509 ORTHO05D001361 5.8e-06 56.2 216 25.0
Gohir.A04G079100 Gossypium hirsutum HOM05D001509 ORTHO05D001361 7.6e-06 55.8 227 25.1
Gohir.D04G118300 Gossypium hirsutum HOM05D001509 ORTHO05D001361 7.6e-06 55.8 227 25.1
Gorai.009G423400 Gossypium raimondii HOM05D001509 ORTHO05D001361 7.6e-06 55.8 227 25.1
BcaB06g28988 Brassica carinata HOM05D001509 ORTHO05D001361 1.0e-05 55.5 270 24.1
MD12G1136200 Malus domestica HOM05D001509 ORTHO05D001361 1.0e-05 55.5 243 23.9
Potri.016G080000 Populus trichocarpa HOM05D001509 ORTHO05D001361 1.0e-05 55.5 279 24.4
Solyc09g005740.3 Solanum lycopersicum HOM05D001509 ORTHO05D001361 1.0e-05 55.5 250 24.0
Sopen09g001630 Solanum pennellii HOM05D001509 ORTHO05D001361 1.0e-05 55.5 250 24.0


User provided reference genes

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