Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0103 Selaginella moellendorffii HOM05D005133 ORTHO05D006685 0.0e+00 1294.3 659 100.0
SMO114G0022 Selaginella moellendorffii HOM05D005133 ORTHO05D006685 1.3e-54 218.8 375 44.8
SMO239G0112 Selaginella moellendorffii HOM05D005133 ORTHO05D006685 1.1e-47 195.7 226 55.3
SMO117G0003 Selaginella moellendorffii HOM05D005133 ORTHO05D375497 2.5e-18 98.2 54 85.2
Atru.chr5.593 Acer truncatum HOM05D005133 ORTHO05D006685 1.6e-17 95.5 182 39.6
CiPaw.02G036200 Carya illinoinensis HOM05D005133 ORTHO05D006685 6.1e-17 93.6 179 41.3
Migut.B01807 Erythranthe guttata HOM05D005133 ORTHO05D006685 8.0e-17 93.2 173 42.2
Cc06_g17440 Coffea canephora HOM05D005133 ORTHO05D006685 1.0e-16 92.8 233 36.1
GSVIVG01027010001 Vitis vinifera HOM05D005133 ORTHO05D006685 1.4e-16 92.4 175 40.6
MSTRG.20869 Avicennia marina HOM05D005133 ORTHO05D006685 1.8e-16 92.0 179 38.0
AUR62004420 Chenopodium quinoa HOM05D005133 ORTHO05D006685 1.8e-16 92.0 176 40.3
Migut.B01808 Erythranthe guttata HOM05D005133 ORTHO05D006685 1.8e-16 92.0 173 41.0
CANSAT01G0674 Cannabis sativa HOM05D005133 ORTHO05D006685 2.3e-16 91.7 168 41.7
DCAR_025229 Daucus carota HOM05D005133 ORTHO05D006685 2.3e-16 91.7 181 41.4
Manes.01G251600 Manihot esculenta HOM05D005133 ORTHO05D006685 3.0e-16 91.3 171 42.7
Aqoxy3G00498 Aquilegia oxysepala HOM05D005133 ORTHO05D006685 4.0e-16 90.9 183 38.8
AT2G46200 Arabidopsis thaliana HOM05D005133 ORTHO05D006685 4.0e-16 90.9 140 43.6
PGSC0003DMG401000198 Solanum tuberosum HOM05D005133 ORTHO05D006685 4.0e-16 90.9 181 38.1
ClCG05G014200 Citrullus lanatus HOM05D005133 ORTHO05D006685 5.2e-16 90.5 183 37.7
Migut.H02011 Erythranthe guttata HOM05D005133 ORTHO05D006685 5.2e-16 90.5 173 40.5
Lalb_Chr19g0138411 Lupinus albus HOM05D005133 ORTHO05D006685 5.2e-16 90.5 171 40.4
Potri.014G091400 Populus trichocarpa HOM05D005133 ORTHO05D006685 5.2e-16 90.5 172 43.0
Sp5g32810 Schrenkiella parvula HOM05D005133 ORTHO05D006685 6.8e-16 90.1 148 41.9
Dinv43872 Davidia involucrata HOM05D005133 ORTHO05D006685 8.8e-16 89.7 184 39.1
BcaC02g12500 Brassica carinata HOM05D005133 ORTHO05D006685 1.2e-15 89.4 153 43.8
Psat7g208960 Pisum sativum HOM05D005133 ORTHO05D006685 1.2e-15 89.4 172 39.5
Aa31LG1G27580 Aethionema arabicum HOM05D005133 ORTHO05D006685 1.5e-15 89.0 148 43.9
BcaC02g12707 Brassica carinata HOM05D005133 ORTHO05D006685 1.5e-15 89.0 148 45.9
CsaV3_3G008530 Cucumis sativus L. HOM05D005133 ORTHO05D006685 1.5e-15 89.0 183 37.2
Solyc01g095230.4 Solanum lycopersicum HOM05D005133 ORTHO05D006685 1.5e-15 89.0 181 38.1
Sopen01g039020 Solanum pennellii HOM05D005133 ORTHO05D006685 1.5e-15 89.0 181 38.1
SGA_v2.0_scaffold95G28800 Striga asiatica HOM05D003721 ORTHO05D004303 1.5e-15 89.0 243 37.0
AUR62022626 Chenopodium quinoa HOM05D005133 ORTHO05D006685 2.0e-15 88.6 153 43.8
A05p01630 Brassica napus HOM05D005133 ORTHO05D006685 2.6e-15 88.2 144 41.7
BraA05t19159Z Brassica rapa HOM05D005133 ORTHO05D006685 2.6e-15 88.2 144 41.7
CARHR141470 Cardamine hirsuta HOM05D005133 ORTHO05D006685 3.4e-15 87.8 142 43.7
Phvul.011G052300 Phaseolus vulgaris HOM05D005133 ORTHO05D006685 3.4e-15 87.8 168 39.9
C04p01840 Brassica napus HOM05D005133 ORTHO05D006685 4.4e-15 87.4 153 43.1
Thhalv10001493m.g Eutrema salsugineum HOM05D005133 ORTHO05D006685 4.4e-15 87.4 139 43.9
Sc01g0003150 Simmondsia chinensis HOM05D005133 ORTHO05D006685 4.4e-15 87.4 154 41.6
Thecc.01G351000 Theobroma cacao HOM05D005133 ORTHO05D006685 4.4e-15 87.4 185 37.8
Thhalv10028732m.g Eutrema salsugineum HOM05D005133 ORTHO05D006685 5.7e-15 87.0 140 42.1
TPR.G34211 Trifolium pratense HOM05D005133 ORTHO05D006685 5.7e-15 87.0 172 40.1
AL4G45460 Arabidopsis lyrata HOM05D005133 ORTHO05D006685 7.5e-15 86.7 140 41.4
Cpa.g.sc11.53 Carica papaya HOM05D005133 ORTHO05D006685 7.5e-15 86.7 180 38.9
Cfa007878 Carpinus fangiana HOM05D005133 ORTHO05D006685 7.5e-15 86.7 179 40.8
Gohir.D07G145800 Gossypium hirsutum HOM05D005133 ORTHO05D006685 7.5e-15 86.7 183 40.4
Gorai.001G158000 Gossypium raimondii HOM05D005133 ORTHO05D006685 7.5e-15 86.7 183 40.4
Peaxi162Scf00020g01713 Petunia axillaris HOM05D005133 ORTHO05D006685 7.5e-15 86.7 181 38.7
TAR375G0148 Trochodendron aralioides HOM05D005133 ORTHO05D006685 7.5e-15 86.7 183 38.3
Gohir.A07G140500 Gossypium hirsutum HOM05D005133 ORTHO05D006685 9.8e-15 86.3 183 40.4
Zm00001eb339090 Zea mays HOM05D005133 ORTHO05D006685 9.8e-15 86.3 185 37.3
ATR0626G352 Amborella trichopoda HOM05D005133 ORTHO05D006685 1.7e-14 85.5 352 29.3
Sed0023612 Sechium edule HOM05D005133 ORTHO05D006685 1.7e-14 85.5 179 36.9
Ciclev10020434m.g Citrus clementina HOM05D005133 ORTHO05D006685 2.2e-14 85.1 178 38.8
COL.COLO4_06373 Corchorus olitorius HOM05D005133 ORTHO05D006685 2.2e-14 85.1 183 39.3
PSO135G0656 Papaver somniferum HOM05D005133 ORTHO05D006685 2.2e-14 85.1 179 39.1
Rhsim07G0009300 Rhododendron simsii HOM05D005133 ORTHO05D006685 2.2e-14 85.1 183 38.8
Dinv32531 Davidia involucrata HOM05D005133 ORTHO05D006685 2.8e-14 84.7 183 37.2
Nitab4.5_0000915g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 2.8e-14 84.7 181 35.4
Nitab4.5_0003501g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 3.7e-14 84.3 181 36.5
Cfa003860 Carpinus fangiana HOM05D005133 ORTHO05D006685 4.9e-14 84.0 180 39.4
HanXRQChr17g0562291 Helianthus annuus HOM05D005133 ORTHO05D006685 4.9e-14 84.0 177 36.7
Pp3c4_26280 Physcomitrium patens HOM05D005133 ORTHO05D006685 4.9e-14 84.0 186 35.5
PGR031G0061 Punica granatum HOM05D005133 ORTHO05D006685 4.9e-14 84.0 176 37.5
VMungo1127G1104 Vigna mungo HOM05D005133 ORTHO05D006685 4.9e-14 84.0 168 40.5
CDE09G0708 Ceratophyllum demersum HOM05D005133 ORTHO05D006685 6.3e-14 83.6 170 38.2
Duzib133G0222 Durio zibethinus HOM05D005133 ORTHO05D006685 6.3e-14 83.6 173 41.0
Lj7C506T5 Lonicera japonica HOM05D005133 ORTHO05D006685 6.3e-14 83.6 184 37.0
Prupe.2G179100 Prunus persica HOM05D005133 ORTHO05D006685 6.3e-14 83.6 183 36.1
CSS0040148 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 1.1e-13 82.8 183 36.6
Haze_14198 Corylus avellana HOM05D005133 ORTHO05D006685 1.1e-13 82.8 179 40.2
Actinidia20170 Actinidia chinensis HOM05D005133 ORTHO05D006685 1.4e-13 82.4 183 36.6
Glyma.12G050200 Glycine max HOM05D005133 ORTHO05D006685 1.4e-13 82.4 168 39.9
Lsat_1_v5_gn_4_34900 Lactuca sativa HOM05D005133 ORTHO05D006685 1.8e-13 82.0 145 40.7
THA.LOC104817324 Tarenaya hassleriana HOM05D005133 ORTHO05D006685 1.8e-13 82.0 138 42.8
arahy.Tifrunner.gnm1.ann1.ZNWN3Y Arachis hypogaea HOM05D005133 ORTHO05D006685 2.4e-13 81.6 171 40.4
Os01g0226500 Oryza sativa ssp. japonica HOM05D005133 ORTHO05D006685 2.4e-13 81.6 183 34.4
RcHm_v2.0_Chr1g0358181 Rosa chinensis HOM05D005133 ORTHO05D006685 2.4e-13 81.6 183 37.2
CSS0000155 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 4.1e-13 80.9 184 38.0
CSS0009332 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 4.1e-13 80.9 184 38.0
unitig_0.g335 Utricularia gibba HOM05D005133 ORTHO05D006685 4.1e-13 80.9 165 38.2
arahy.Tifrunner.gnm1.ann1.YZ0HQS Arachis hypogaea HOM05D005133 ORTHO05D006685 5.4e-13 80.5 171 39.8
Ca_20805_v3 Cicer arietinum L. HOM05D005133 ORTHO05D006685 5.4e-13 80.5 171 37.4
QL07p038619 Quercus lobata HOM05D005133 ORTHO05D006685 5.4e-13 80.5 155 41.3
SalBow1G3823 Salvia bowleyana HOM05D005133 ORTHO05D006685 7.0e-13 80.1 237 33.3
TWI34G1432 Tripterygium wilfordii HOM05D005133 ORTHO05D006685 7.0e-13 80.1 178 36.0
ECA234G4221 Erigeron canadensis HOM05D005133 ORTHO05D006685 9.2e-13 79.7 156 39.7
MD07G1130200 Malus domestica HOM05D005133 ORTHO05D006685 1.2e-12 79.3 183 36.1
SalBow3G2243 Salvia bowleyana HOM05D005133 ORTHO05D006685 1.2e-12 79.3 182 36.8
Carub.0004s2888 Capsella rubella HOM05D005133 ORTHO05D006685 2.7e-12 78.2 145 38.6
MELO3C006074.2 Cucumis melo HOM05D005133 ORTHO05D006685 4.5e-12 77.4 281 31.0
Nn7g37315 Nelumbo nucifera HOM05D005133 ORTHO05D006685 4.5e-12 77.4 181 36.5
Eucgr.J01063 Eucalyptus grandis HOM05D005133 ORTHO05D006685 5.9e-12 77.0 183 33.3
Sabra14G0066300 Salix brachista HOM05D005133 ORTHO05D006685 7.7e-12 76.6 204 36.8
HPP92_023966 Vanilla planifolia HOM05D005133 ORTHO05D006685 1.7e-11 75.5 169 38.5
AagrBONN_evm.TU.Sc2ySwM_344.4499 Anthoceros agrestis HOM05D005133 ORTHO05D006685 2.3e-11 75.1 234 32.5
FvH4_7g15540 Fragaria vesca HOM05D005133 ORTHO05D006685 2.3e-11 75.1 181 34.3
LjContig00310g0005517 Lotus japonicus HOM05D005133 ORTHO05D006685 2.3e-11 75.1 171 35.7
PSO478G1127 Papaver somniferum HOM05D005133 ORTHO05D006685 2.3e-11 75.1 91 52.7
EL10Ac1g00344 Beta vulgaris HOM05D005133 ORTHO05D006685 3.8e-11 74.3 182 35.7
arahy.Tifrunner.gnm1.ann1.JRPH7J Arachis hypogaea HOM05D005133 ORTHO05D006685 5.0e-11 73.9 125 42.4
FAN06G1776 Fragaria x ananassa HOM05D005133 ORTHO05D006685 5.0e-11 73.9 181 34.3
FAN10G2725 Fragaria x ananassa HOM05D005133 ORTHO05D006685 5.0e-11 73.9 182 34.6
FAN10G2939 Fragaria x ananassa HOM05D005133 ORTHO05D006685 8.6e-11 73.2 182 34.1
RcHm_v2.0_Chr1g0357891 Rosa chinensis HOM05D005133 ORTHO05D006685 8.6e-11 73.2 179 36.3
Hund27238 Selenicereus undatus HOM05D005133 ORTHO05D006685 2.8e-09 68.2 165 37.6
CAN.G78.137 Capsicum annuum HOM05D005133 ORTHO05D006685 8.0e-09 66.6 213 30.5
MBI16_g41624_MAGBIO Magnolia biondii HOM05D005133 ORTHO05D006685 1.8e-08 65.5 230 30.0
Mapoly0001s0322 Marchantia polymorpha HOM05D005133 ORTHO05D006685 2.3e-08 65.1 324 28.1
Rhsim01G0168000 Rhododendron simsii HOM05D005133 ORTHO05D006685 5.2e-08 63.9 49 69.4
Ah.05g180080 Amaranthus hybridus HOM05D005133 ORTHO05D006685 6.8e-08 63.5 149 40.3
FAN06G1340 Fragaria x ananassa HOM05D005133 ORTHO05D006685 6.8e-08 63.5 191 31.9
Medtr4g068010 Medicago truncatula HOM05D005133 ORTHO05D006685 1.2e-07 62.8 172 33.1
RcHm_v2.0_Chr1g0358091 Rosa chinensis HOM05D005133 ORTHO05D006685 5.7e-07 60.5 188 33.0
vmacro20884 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 9.8e-07 59.7 209 31.1


User provided reference genes

Program Settings