Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0078 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 4.6e-169 597.8 301 100.0
Mapoly0080s0074 Marchantia polymorpha HOM05D006487 ORTHO05D007982 2.9e-62 243.0 218 56.0
Pp3c5_25480 Physcomitrium patens HOM05D006487 ORTHO05D007982 3.6e-57 226.1 225 50.2
HPP92_014774 Vanilla planifolia HOM05D006487 ORTHO05D007982 1.1e-56 224.6 193 55.4
Pp3c25_9140 Physcomitrium patens HOM05D006487 ORTHO05D007982 3.1e-56 223.0 175 59.4
SEGI_16734 Sequoiadendron giganteum HOM05D006487 ORTHO05D007982 2.6e-55 219.9 191 56.0
PSO063G4419 Papaver somniferum HOM05D006487 ORTHO05D007982 7.5e-55 218.4 180 56.7
CDE04G1004 Ceratophyllum demersum HOM05D006487 ORTHO05D007982 2.9e-54 216.5 178 59.0
PSO782G2052 Papaver somniferum HOM05D006487 ORTHO05D007982 8.3e-54 214.9 180 56.1
ATR0618G270 Amborella trichopoda HOM05D006487 ORTHO05D007982 5.4e-53 212.2 224 52.7
Hma1.2p1_0989F.1_g244820 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 3.5e-52 209.5 188 52.1
PGR083G2465 Punica granatum HOM05D006487 ORTHO05D007982 4.6e-52 209.1 182 52.2
MD14G1245900 Malus domestica HOM05D006487 ORTHO05D007982 6.0e-52 208.8 164 58.5
MBI06_g27513_MAGBIO Magnolia biondii HOM05D006487 ORTHO05D007982 7.8e-52 208.4 176 54.5
AL1G54980 Arabidopsis lyrata HOM05D006487 ORTHO05D007982 1.7e-51 207.2 179 53.1
SGA_v2.0_scaffold90G27746 Striga asiatica HOM05D006487 ORTHO05D007982 1.7e-51 207.2 232 48.3
Actinidia34682 Actinidia chinensis HOM05D006487 ORTHO05D007982 2.3e-51 206.8 180 53.9
Sp1g35330 Schrenkiella parvula HOM05D006487 ORTHO05D007982 2.3e-51 206.8 199 50.3
CANSAT64G1132 Cannabis sativa HOM05D006487 ORTHO05D007982 3.9e-51 206.1 176 55.7
Lsat_1_v5_gn_0_10541 Lactuca sativa HOM05D006487 ORTHO05D007982 3.9e-51 206.1 184 53.3
TAR629G0717 Trochodendron aralioides HOM05D006487 ORTHO05D007982 3.9e-51 206.1 176 53.4
RcHm_v2.0_Chr7g0177071 Rosa chinensis HOM05D006487 ORTHO05D007982 5.1e-51 205.7 190 52.6
Phvul.004G139000 Phaseolus vulgaris HOM05D006487 ORTHO05D007982 6.6e-51 205.3 168 58.3
Thhalv10011620m.g Eutrema salsugineum HOM05D006487 ORTHO05D007982 1.5e-50 204.1 188 51.6
Cpa.g.sc168.16 Carica papaya HOM05D006487 ORTHO05D007982 1.9e-50 203.8 221 46.6
Migut.O00267 Erythranthe guttata HOM05D006487 ORTHO05D007982 2.5e-50 203.4 191 52.9
Glyma.16G213000 Glycine max HOM05D006487 ORTHO05D007982 2.5e-50 203.4 166 57.8
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 2.5e-50 203.4 168 57.1
Aqoxy3G04297 Aquilegia oxysepala HOM05D006487 ORTHO05D007982 3.3e-50 203.0 166 55.4
AT1G48380 Arabidopsis thaliana HOM05D006487 ORTHO05D007982 3.3e-50 203.0 199 49.2
A08p04750 Brassica napus HOM05D006487 ORTHO05D007982 3.3e-50 203.0 220 48.6
BraA08t32504Z Brassica rapa HOM05D006487 ORTHO05D007982 3.3e-50 203.0 220 48.6
Carub.0001s3750 Capsella rubella HOM05D006487 ORTHO05D007982 3.3e-50 203.0 191 50.3
ClCG01G014820 Citrullus lanatus HOM05D006487 ORTHO05D007982 3.3e-50 203.0 186 54.8
GSVIVG01027119001 Vitis vinifera HOM05D006487 ORTHO05D007982 3.3e-50 203.0 198 52.5
FvH4_5g18410 Fragaria vesca HOM05D006487 ORTHO05D007982 4.3e-50 202.6 187 52.9
Prupe.5G243800 Prunus persica HOM05D006487 ORTHO05D007982 4.3e-50 202.6 182 52.2
Sed0005317 Sechium edule HOM05D006487 ORTHO05D007982 4.3e-50 202.6 197 51.8
FAN18G0592 Fragaria x ananassa HOM05D006487 ORTHO05D007982 5.6e-50 202.2 187 52.9
TWI81G0553 Tripterygium wilfordii HOM05D006487 ORTHO05D007982 5.6e-50 202.2 184 52.2
CsaV3_1G007510 Cucumis sativus L. HOM05D006487 ORTHO05D007982 7.3e-50 201.8 167 57.5
MSTRG.23212 Avicennia marina HOM05D006487 ORTHO05D007982 1.2e-49 201.1 179 53.6
CARHR037990 Cardamine hirsuta HOM05D006487 ORTHO05D007982 1.6e-49 200.7 198 50.0
Thecc.05G197400 Theobroma cacao HOM05D006487 ORTHO05D007982 1.6e-49 200.7 180 52.2
BcaB04g17434 Brassica carinata HOM05D006487 ORTHO05D007982 2.1e-49 200.3 187 51.9
BcaC07g37138 Brassica carinata HOM05D006487 ORTHO05D007982 2.8e-49 199.9 181 53.0
Eucgr.H00648 Eucalyptus grandis HOM05D006487 ORTHO05D007982 2.8e-49 199.9 212 45.8
SalBow5G2999 Salvia bowleyana HOM05D006487 ORTHO05D007982 2.8e-49 199.9 175 54.9
Dinv03426 Davidia involucrata HOM05D006487 ORTHO05D007982 3.6e-49 199.5 186 50.0
FAN13G0937 Fragaria x ananassa HOM05D006487 ORTHO05D007982 3.6e-49 199.5 180 52.8
Glyma.09G164600 Glycine max HOM05D006487 ORTHO05D007982 4.7e-49 199.1 166 56.6
Medtr6g077860 Medicago truncatula HOM05D006487 ORTHO05D007982 4.7e-49 199.1 164 57.9
Rhsim08G0124800 Rhododendron simsii HOM05D006487 ORTHO05D007982 1.1e-48 198.0 183 53.0
C08p05120 Brassica napus HOM05D006487 ORTHO05D007982 1.4e-48 197.6 181 52.5
HanXRQChr15g0492111 Helianthus annuus HOM05D006487 ORTHO05D007982 1.4e-48 197.6 224 47.3
Nn4g25081 Nelumbo nucifera HOM05D006487 ORTHO05D007982 1.4e-48 197.6 189 52.4
THA.LOC104820327 Tarenaya hassleriana HOM05D006487 ORTHO05D007982 1.4e-48 197.6 170 55.3
Haze_18332 Corylus avellana HOM05D006487 ORTHO05D007982 2.3e-48 196.8 167 54.5
Gohir.A08G225300 Gossypium hirsutum HOM05D006487 ORTHO05D007982 2.3e-48 196.8 180 51.7
BolC8t47322H Brassica oleracea HOM05D006487 ORTHO05D007982 3.1e-48 196.4 205 49.8
CAN.G929.21 Capsicum annuum HOM05D006487 ORTHO05D007982 3.1e-48 196.4 181 50.8
Lj2g0009690 Lotus japonicus HOM05D006487 ORTHO05D007982 3.1e-48 196.4 212 50.0
Psat1g121120 Pisum sativum HOM05D006487 ORTHO05D007982 3.1e-48 196.4 251 40.6
Sc07g0007560 Simmondsia chinensis HOM05D006487 ORTHO05D007982 3.1e-48 196.4 174 52.9
AagrBONN_evm.TU.Sc2ySwM_228.567 Anthoceros agrestis HOM05D006487 ORTHO05D007982 4.0e-48 196.1 174 54.0
Gohir.D08G245700 Gossypium hirsutum HOM05D006487 ORTHO05D007982 5.2e-48 195.7 180 51.1
Gorai.004G262200 Gossypium raimondii HOM05D006487 ORTHO05D007982 5.2e-48 195.7 180 51.1
Sopen03g029330 Solanum pennellii HOM05D006487 ORTHO05D007982 5.2e-48 195.7 213 47.4
Solyc03g098620.3 Solanum lycopersicum HOM05D006487 ORTHO05D007982 6.8e-48 195.3 175 51.4
Ca_11836_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 1.2e-47 194.5 183 52.5
Ciclev10020398m.g Citrus clementina HOM05D006487 ORTHO05D007982 1.5e-47 194.1 181 50.3
Oeu023551.1 Olea europaea HOM05D006487 ORTHO05D007982 1.5e-47 194.1 168 54.2
MELO3C002168.2 Cucumis melo HOM05D006487 ORTHO05D007982 2.0e-47 193.7 216 47.7
Nitab4.5_0003040g0090 Nicotiana tabacum HOM05D006487 ORTHO05D007982 2.0e-47 193.7 180 51.1
Manes.02G218400 Manihot esculenta HOM05D006487 ORTHO05D007982 4.4e-47 192.6 170 55.9
arahy.Tifrunner.gnm1.ann1.FG107U Arachis hypogaea HOM05D006487 ORTHO05D007982 7.5e-47 191.8 226 46.5
FAN08G3399 Fragaria x ananassa HOM05D006487 ORTHO05D007982 7.5e-47 191.8 195 50.3
Lalb_Chr22g0353991 Lupinus albus HOM05D006487 ORTHO05D007982 7.5e-47 191.8 195 49.7
Nitab4.5_0000782g0060 Nicotiana tabacum HOM05D006487 ORTHO05D007982 7.5e-47 191.8 183 50.3
PGSC0003DMG400010175 Solanum tuberosum HOM05D006487 ORTHO05D007982 7.5e-47 191.8 213 46.9
AUR62033020 Chenopodium quinoa HOM05D006487 ORTHO05D007982 9.9e-47 191.4 185 49.7
AUR62040775 Chenopodium quinoa HOM05D006487 ORTHO05D007982 1.7e-46 190.7 177 50.3
COL.COLO4_24904 Corchorus olitorius HOM05D006487 ORTHO05D007982 1.7e-46 190.7 187 49.7
DCAR_011682 Daucus carota HOM05D006487 ORTHO05D007982 1.7e-46 190.7 180 52.8
Zm00001eb271770 Zea mays HOM05D006487 ORTHO05D007982 1.7e-46 190.7 182 54.4
Os07g0172200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 2.2e-46 190.3 216 49.1
Atru.chr9.84 Acer truncatum HOM05D006487 ORTHO05D007982 2.9e-46 189.9 166 51.2
Peaxi162Scf00171g00242 Petunia axillaris HOM05D006487 ORTHO05D007982 2.9e-46 189.9 139 59.0
Potri.004G069400 Populus trichocarpa HOM05D006487 ORTHO05D007982 3.7e-46 189.5 191 48.7
arahy.Tifrunner.gnm1.ann1.49K0I5 Arachis hypogaea HOM05D006487 ORTHO05D007982 8.3e-46 188.3 187 51.3
Cc04_g08450 Coffea canephora HOM05D006487 ORTHO05D007982 2.4e-45 186.8 185 49.2
Sabra04G0046600 Salix brachista HOM05D006487 ORTHO05D007982 4.1e-45 186.0 167 52.1
QL10p034099 Quercus lobata HOM05D006487 ORTHO05D007982 5.4e-45 185.7 170 54.1
Prupe.4G244900 Prunus persica HOM05D006487 ORTHO05D007982 2.0e-39 167.2 185 45.9
vmacro17744 Vaccinium macrocarpon HOM05D006487 ORTHO05D007982 2.0e-39 167.2 264 37.5
SMO117G0021 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 3.4e-39 166.4 126 71.4
TPR.G19888 Trifolium pratense HOM05D006487 ORTHO05D007982 1.7e-38 164.1 167 48.5
EL10Ac8g19478 Beta vulgaris HOM05D006487 ORTHO05D007982 1.9e-37 160.6 277 35.0
TAR629G1006 Trochodendron aralioides HOM05D006487 ORTHO05D007982 7.8e-36 155.2 135 54.8
FAN04G2664 Fragaria x ananassa HOM05D006487 ORTHO05D007982 7.3e-34 148.7 183 45.4
Hund22367 Selenicereus undatus HOM05D006487 ORTHO05D007982 1.6e-33 147.5 131 53.4
FAN09G4505 Fragaria x ananassa HOM05D006487 ORTHO05D007982 4.0e-32 142.9 119 56.3
CBR_g34174 Chara braunii HOM05D006487 ORTHO05D007982 1.2e-31 141.4 183 44.3
Lj9A412T44 Lonicera japonica HOM05D006487 ORTHO05D007982 7.6e-31 138.7 105 58.1
Cre13.g576500 Chlamydomonas reinhardtii HOM05D006487 ORTHO05D007982 9.9e-31 138.3 161 44.7
FAN09G0815 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.1e-29 134.8 126 53.2
Os06g0730200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 1.3e-27 127.9 122 56.6
Aa31LG10G5380 Aethionema arabicum HOM05D006487 ORTHO05D007982 8.7e-27 125.2 150 43.3
Hma1.2p1_0989F.1_g244830 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 9.9e-23 111.7 88 54.5
Prupe.2G315400 Prunus persica HOM05D006487 ORTHO05D007982 1.1e-21 108.2 126 43.7
PRCOL_00006754 Prasinoderma coloniale HOM05D006487 ORTHO05D007982 4.2e-21 106.3 129 43.4
Cfa017861 Carpinus fangiana HOM05D006487 ORTHO05D007982 9.3e-21 105.1 88 53.4
CiPaw.16G073400 Carya illinoinensis HOM05D006487 ORTHO05D007982 3.5e-20 103.2 80 56.2
MCO12G143 Micromonas commoda HOM05D006487 ORTHO05D007982 1.0e-19 101.7 159 39.0
TPR.G27400 Trifolium pratense HOM05D006487 ORTHO05D007982 1.4e-08 64.7 73 50.7
Ah.14g085790 Amaranthus hybridus HOM05D006487 ORTHO05D007982 4.5e-07 59.7 83 43.4
CSS0035874 Camellia sinensis var. sinensis HOM05D006487 ORTHO05D007982 5.8e-07 59.3 60 46.7
Ca_30285_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 6.5e-06 55.8 44 52.3


User provided reference genes

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