Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0024 Selaginella moellendorffii HOM05D000203 ORTHO05D037549 2.5e-57 225.7 160 100.0
PSO541G1095 Papaver somniferum HOM05D000203 ORTHO05D000135 1.4e-07 60.5 80 47.5
PSO675G7967 Papaver somniferum HOM05D000203 ORTHO05D000135 2.4e-07 59.7 81 44.4
SGA_v2.0_scaffold32G12976 Striga asiatica HOM05D000203 ORTHO05D000135 4.1e-07 58.9 59 52.5
Duzib160G0196 Durio zibethinus HOM05D000203 ORTHO05D000135 5.3e-07 58.5 62 48.4
Lsat_1_v5_gn_0_36361 Lactuca sativa HOM05D000042 ORTHO05D000028 1.2e-06 57.4 65 47.7
CANSAT56G0232 Cannabis sativa HOM05D000203 ORTHO05D000135 1.5e-06 57.0 87 42.5
PSO675G2437 Papaver somniferum HOM05D000203 ORTHO05D000135 1.5e-06 57.0 80 41.2
Duzib132G1086 Durio zibethinus HOM05D000203 ORTHO05D000135 3.4e-06 55.8 79 41.8
Lsat_1_v5_gn_8_35560 Lactuca sativa HOM05D000042 ORTHO05D000028 3.4e-06 55.8 63 47.6
PSO541G4057 Papaver somniferum HOM05D000203 ORTHO05D000135 3.4e-06 55.8 79 40.5
SGA_v2.0_scaffold342G49433 Striga asiatica HOM05D000203 ORTHO05D000135 3.4e-06 55.8 59 47.5
Lj5g0010179 Lotus japonicus HOM05D000203 ORTHO05D000135 4.5e-06 55.5 92 37.0
Manes.17G067800 Manihot esculenta HOM05D000203 ORTHO05D000135 4.5e-06 55.5 58 44.8
PSO675G7023 Papaver somniferum HOM05D000203 ORTHO05D000135 4.5e-06 55.5 79 40.5
Psat4g141560 Pisum sativum HOM05D000203 ORTHO05D000135 4.5e-06 55.5 46 54.3
Prupe.1G087700 Prunus persica HOM05D000203 ORTHO05D000135 4.5e-06 55.5 59 52.5
Solyc03g019710.3 Solanum lycopersicum HOM05D000042 ORTHO05D000028 4.5e-06 55.5 86 39.5
Sopen03g029910 Solanum pennellii HOM05D000042 ORTHO05D000028 4.5e-06 55.5 86 39.5
TPR.G11928 Trifolium pratense HOM05D000203 ORTHO05D000135 4.5e-06 55.5 44 54.5
Glyma.18G143800 Glycine max HOM05D000203 ORTHO05D000135 5.9e-06 55.1 46 52.2
PSO675G5529 Papaver somniferum HOM05D000203 ORTHO05D000135 5.9e-06 55.1 79 40.5
PSO675G8506 Papaver somniferum HOM05D000203 ORTHO05D000135 5.9e-06 55.1 79 40.5
SEGI_24450 Sequoiadendron giganteum HOM05D031078 ORTHO05D386551 5.9e-06 55.1 60 40.0
PGSC0003DMG401015205 Solanum tuberosum HOM05D000042 ORTHO05D000028 5.9e-06 55.1 86 38.4
TWI09G1461 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 5.9e-06 55.1 58 48.3
HPP92_020060 Vanilla planifolia HOM05D000042 ORTHO05D000028 5.9e-06 55.1 71 43.7
VMungo0251G0344 Vigna mungo HOM05D000203 ORTHO05D000135 5.9e-06 55.1 46 52.2
Aqoxy6G01522 Aquilegia oxysepala HOM05D000203 ORTHO05D000135 7.7e-06 54.7 85 41.2
BcaB07g29942 Brassica carinata HOM05D000307 ORTHO05D000166 7.7e-06 54.7 46 52.2
CiPaw.09G126300 Carya illinoinensis HOM05D000203 ORTHO05D000135 7.7e-06 54.7 63 49.2
MELO3C001111.2 Cucumis melo HOM05D000042 ORTHO05D000028 7.7e-06 54.7 58 48.3
MELO3C002369.2 Cucumis melo HOM05D000042 ORTHO05D000028 7.7e-06 54.7 58 48.3
MELO3C007017.2 Cucumis melo HOM05D000042 ORTHO05D000980 7.7e-06 54.7 52 51.9
CsaV3_1G009750 Cucumis sativus L. HOM05D000042 ORTHO05D000028 7.7e-06 54.7 58 48.3
CsaV3_6G052910 Cucumis sativus L. HOM05D000042 ORTHO05D000980 7.7e-06 54.7 52 51.9
Thhalv10004893m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 7.7e-06 54.7 46 45.7
Glyma.05G227200 Glycine max HOM05D000203 ORTHO05D000135 7.7e-06 54.7 46 52.2
Hma1.2p1_1175F.1_g264090 Hydrangea macrophylla HOM05D000203 ORTHO05D000135 7.7e-06 54.7 77 45.5
Mapoly0011s0161 Marchantia polymorpha HOM05D000042 ORTHO05D000028 7.7e-06 54.7 90 40.0
PSO302G0246 Papaver somniferum HOM05D000203 ORTHO05D000135 7.7e-06 54.7 59 50.8
PSO541G5965 Papaver somniferum HOM05D000203 ORTHO05D000135 7.7e-06 54.7 79 40.5
PGR102G1683 Punica granatum HOM05D000203 ORTHO05D000135 7.7e-06 54.7 59 50.8
Thecc.06G153500 Theobroma cacao HOM05D000203 ORTHO05D000135 7.7e-06 54.7 62 46.8
TWI74G0210 Tripterygium wilfordii HOM05D000042 ORTHO05D000980 7.7e-06 54.7 42 61.9
Aa31LG4G2710 Aethionema arabicum HOM05D000203 ORTHO05D000135 1.0e-05 54.3 45 55.6
CAN.G7478.1 Capsicum annuum HOM05D000042 ORTHO05D000028 1.0e-05 54.3 63 44.4
AUR62006911 Chenopodium quinoa HOM05D000203 ORTHO05D000135 1.0e-05 54.3 44 56.8
Ca_18156_v3 Cicer arietinum L. HOM05D000203 ORTHO05D000135 1.0e-05 54.3 46 52.2
Glyma.08G120600 Glycine max HOM05D000042 ORTHO05D000028 1.0e-05 54.3 86 41.9
Gohir.D04G173100 Gossypium hirsutum HOM05D000203 ORTHO05D000135 1.0e-05 54.3 75 41.3
Gohir.D04G173148 Gossypium hirsutum HOM05D000203 ORTHO05D000135 1.0e-05 54.3 75 41.3
Gorai.012G163200 Gossypium raimondii HOM05D000203 ORTHO05D000135 1.0e-05 54.3 87 37.9
Gorai.N026300 Gossypium raimondii HOM05D000203 ORTHO05D000135 1.0e-05 54.3 87 37.9
Lalb_Chr04g0255491 Lupinus albus HOM05D000042 ORTHO05D000028 1.0e-05 54.3 74 40.5
Lalb_Chr23g0271471 Lupinus albus HOM05D000203 ORTHO05D000135 1.0e-05 54.3 91 38.5
Medtr1g047550 Medicago truncatula HOM05D000203 ORTHO05D000135 1.0e-05 54.3 46 52.2
Medtr8g079502 Medicago truncatula HOM05D000203 ORTHO05D000135 1.0e-05 54.3 46 52.2
PSO541G1434 Papaver somniferum HOM05D000203 ORTHO05D000135 1.0e-05 54.3 79 41.8
Phvul.011G172800 Phaseolus vulgaris HOM05D000203 ORTHO05D000135 1.0e-05 54.3 46 52.2
Psat3g164040 Pisum sativum HOM05D000203 ORTHO05D000135 1.0e-05 54.3 46 52.2
Potri.004G130900 Populus trichocarpa HOM05D000203 ORTHO05D000135 1.0e-05 54.3 63 49.2
Sed0007340 Sechium edule HOM05D000203 ORTHO05D000135 1.0e-05 54.3 59 50.8
Thecc.02G032000 Theobroma cacao HOM05D000203 ORTHO05D000135 1.0e-05 54.3 79 40.5
Zm00001eb375800 Zea mays HOM05D000042 ORTHO05D000028 1.0e-05 54.3 47 57.4


User provided reference genes

Program Settings