Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0016 Selaginella moellendorffii HOM05D006275 ORTHO05D007839 6.5e-63 243.8 117 100.0
AagrBONN_evm.TU.Sc2ySwM_368.2624 Anthoceros agrestis HOM05D006275 ORTHO05D007839 1.3e-31 139.8 100 60.0
Pp3c4_22510 Physcomitrium patens HOM05D006275 ORTHO05D007839 2.9e-31 138.7 111 55.9
Mapoly0051s0056 Marchantia polymorpha HOM05D006275 ORTHO05D007839 5.0e-31 137.9 109 55.0
Pp3c13_7030 Physcomitrium patens HOM05D006275 ORTHO05D007839 5.6e-30 134.4 107 52.3
Pp3c3_430 Physcomitrium patens HOM05D006275 ORTHO05D007839 2.8e-29 132.1 107 52.3
CBR_g52135 Chara braunii HOM05D006275 ORTHO05D007839 5.2e-28 127.9 106 54.7
FAN15G2697 Fragaria x ananassa HOM05D006275 ORTHO05D007839 1.2e-27 126.7 99 59.6
FAN27G1059 Fragaria x ananassa HOM05D006275 ORTHO05D007839 1.2e-27 126.7 99 59.6
ATR0568G031 Amborella trichopoda HOM05D006275 ORTHO05D007839 2.0e-27 125.9 108 51.9
RcHm_v2.0_Chr6g0301461 Rosa chinensis HOM05D006275 ORTHO05D007839 2.6e-27 125.6 100 58.0
FvH4_2g39490 Fragaria vesca HOM05D006275 ORTHO05D007839 3.4e-27 125.2 99 58.6
Manes.05G156800 Manihot esculenta HOM05D006275 ORTHO05D007839 5.8e-27 124.4 115 51.3
Lalb_Chr22g0354641 Lupinus albus HOM05D006275 ORTHO05D007839 7.5e-27 124.0 100 59.0
Carub.0002s2219 Capsella rubella HOM05D006275 ORTHO05D007839 9.8e-27 123.6 102 53.9
Cc09_g08950 Coffea canephora HOM05D006275 ORTHO05D007839 9.8e-27 123.6 109 54.1
Duzib093G0437 Durio zibethinus HOM05D006275 ORTHO05D007839 9.8e-27 123.6 101 56.4
MD15G1023800 Malus domestica HOM05D006275 ORTHO05D007839 9.8e-27 123.6 101 55.4
Solyc04g080630.4 Solanum lycopersicum HOM05D006275 ORTHO05D007839 9.8e-27 123.6 96 57.3
Sopen04g034220 Solanum pennellii HOM05D006275 ORTHO05D007839 9.8e-27 123.6 96 57.3
Ciclev10002669m.g Citrus clementina HOM05D006275 ORTHO05D007839 1.3e-26 123.2 101 56.4
CARHR068700 Cardamine hirsuta HOM05D006275 ORTHO05D007839 1.7e-26 122.9 112 48.2
Sabra02G0026900 Salix brachista HOM05D006275 ORTHO05D007839 1.7e-26 122.9 102 53.9
PGSC0003DMG400003696 Solanum tuberosum HOM05D006275 ORTHO05D007839 1.7e-26 122.9 96 57.3
Cpa.g.c33902 Carica papaya HOM05D006275 ORTHO05D007839 2.9e-26 122.1 101 56.4
Gohir.A05G192200 Gossypium hirsutum HOM05D006275 ORTHO05D007839 2.9e-26 122.1 100 56.0
Gohir.D05G195400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 2.9e-26 122.1 100 56.0
Gorai.009G200300 Gossypium raimondii HOM05D006275 ORTHO05D007839 2.9e-26 122.1 100 56.0
Thecc.08G031000 Theobroma cacao HOM05D006275 ORTHO05D007839 2.9e-26 122.1 100 56.0
AL2G35280 Arabidopsis lyrata HOM05D006275 ORTHO05D007839 3.7e-26 121.7 102 52.9
Eucgr.F01878 Eucalyptus grandis HOM05D006275 ORTHO05D007839 3.7e-26 121.7 103 51.5
PGR031G1371 Punica granatum HOM05D006275 ORTHO05D007839 3.7e-26 121.7 101 55.4
Atru.chr13.432 Acer truncatum HOM05D006275 ORTHO05D007839 4.9e-26 121.3 101 54.5
DCAR_022467 Daucus carota HOM05D006275 ORTHO05D007839 4.9e-26 121.3 97 55.7
CDE02G2235 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 8.3e-26 120.6 99 58.6
Prupe.1G376100 Prunus persica HOM05D006275 ORTHO05D007839 8.3e-26 120.6 101 55.4
Aqoxy5G01584 Aquilegia oxysepala HOM05D006275 ORTHO05D007839 1.1e-25 120.2 97 52.6
CDE06G0798 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 1.1e-25 120.2 99 58.6
COL.COLO4_26271 Corchorus olitorius HOM05D006275 ORTHO05D007839 1.1e-25 120.2 99 54.5
MD08G1027600 Malus domestica HOM05D006275 ORTHO05D007839 1.1e-25 120.2 101 55.4
VMungo0647G0412 Vigna mungo HOM05D006275 ORTHO05D007839 1.1e-25 120.2 98 58.2
Ah.05g177020 Amaranthus hybridus HOM05D006275 ORTHO05D007839 1.4e-25 119.8 94 55.3
MSTRG.1264 Avicennia marina HOM05D006275 ORTHO05D007839 1.9e-25 119.4 115 52.2
Phvul.001G012400 Phaseolus vulgaris HOM05D006275 ORTHO05D007839 1.9e-25 119.4 100 56.0
SEGI_04934 Sequoiadendron giganteum HOM05D006275 ORTHO05D007839 1.9e-25 119.4 107 51.4
SGA_v2.0_scaffold201G41391 Striga asiatica HOM05D006275 ORTHO05D007839 1.9e-25 119.4 114 48.2
HPP92_009679 Vanilla planifolia HOM05D006275 ORTHO05D007839 1.9e-25 119.4 105 53.3
GSVIVG01009748001 Vitis vinifera HOM05D006275 ORTHO05D007839 1.9e-25 119.4 100 55.0
AT1G75350 Arabidopsis thaliana HOM05D006275 ORTHO05D007839 2.4e-25 119.0 100 52.0
CANSAT56G0974 Cannabis sativa HOM05D006275 ORTHO05D007839 2.4e-25 119.0 107 50.5
MELO3C003811.2 Cucumis melo HOM05D006275 ORTHO05D007839 2.4e-25 119.0 98 52.0
CsaV3_3G045380 Cucumis sativus L. HOM05D006275 ORTHO05D007839 2.4e-25 119.0 98 52.0
SalBow7G2217 Salvia bowleyana HOM05D006275 ORTHO05D007839 2.4e-25 119.0 113 48.7
AUR62038041 Chenopodium quinoa HOM05D006275 ORTHO05D007839 3.2e-25 118.6 95 54.7
Ca_18049_v3 Cicer arietinum L. HOM05D006275 ORTHO05D007839 3.2e-25 118.6 109 51.4
Nn1g04018 Nelumbo nucifera HOM05D006275 ORTHO05D007839 3.2e-25 118.6 105 52.4
BcaC08g47007 Brassica carinata HOM05D006275 ORTHO05D007839 4.1e-25 118.2 102 52.0
BcaC08g47361 Brassica carinata HOM05D006275 ORTHO05D007839 4.1e-25 118.2 102 52.0
A07p40910 Brassica napus HOM05D006275 ORTHO05D007839 4.1e-25 118.2 102 52.0
C06p49340 Brassica napus HOM05D006275 ORTHO05D007839 4.1e-25 118.2 102 52.0
BolC6t39969H Brassica oleracea HOM05D006275 ORTHO05D007839 4.1e-25 118.2 102 52.0
BraA07t31631Z Brassica rapa HOM05D006275 ORTHO05D007839 4.1e-25 118.2 102 52.0
ClCG05G018790 Citrullus lanatus HOM05D006275 ORTHO05D007839 5.4e-25 117.9 98 52.0
ECA232G2653 Erigeron canadensis HOM05D006275 ORTHO05D007839 5.4e-25 117.9 115 47.0
Thhalv10019294m.g Eutrema salsugineum HOM05D006275 ORTHO05D007839 5.4e-25 117.9 102 51.0
Potri.002G033300 Populus trichocarpa HOM05D006275 ORTHO05D007839 5.4e-25 117.9 102 52.9
Sed0006872 Sechium edule HOM05D006275 ORTHO05D007839 5.4e-25 117.9 98 52.0
Sc02g0005820 Simmondsia chinensis HOM05D006275 ORTHO05D007839 5.4e-25 117.9 115 50.4
BcaC02g12477 Brassica carinata HOM05D006275 ORTHO05D007839 7.0e-25 117.5 102 51.0
A05p02860 Brassica napus HOM05D006275 ORTHO05D007839 7.0e-25 117.5 102 51.0
C04p03490 Brassica napus HOM05D006275 ORTHO05D007839 7.0e-25 117.5 102 51.0
BolC4t21983H Brassica oleracea HOM05D006275 ORTHO05D007839 7.0e-25 117.5 102 51.0
BraA05t19277Z Brassica rapa HOM05D006275 ORTHO05D007839 7.0e-25 117.5 102 51.0
Oeu047769.1 Olea europaea HOM05D006275 ORTHO05D007839 7.0e-25 117.5 96 54.2
Peaxi162Scf00140g10025 Petunia axillaris HOM05D006275 ORTHO05D007839 7.0e-25 117.5 100 54.0
Haze_22533 Corylus avellana HOM05D006275 ORTHO05D007839 9.2e-25 117.1 84 54.8
unitig_46.g17937 Utricularia gibba HOM05D006275 ORTHO05D007839 9.2e-25 117.1 111 49.5
CiPaw.07G158800 Carya illinoinensis HOM05D006275 ORTHO05D007839 1.2e-24 116.7 92 55.4
AUR62014497 Chenopodium quinoa HOM05D006275 ORTHO05D007839 1.2e-24 116.7 95 54.7
HanXRQChr16g0501501 Helianthus annuus HOM05D006275 ORTHO05D007839 1.2e-24 116.7 102 52.0
Oeu002824.1 Olea europaea HOM05D006275 ORTHO05D007839 1.2e-24 116.7 96 54.2
PSO731G0021 Papaver somniferum HOM05D006275 ORTHO05D007839 1.2e-24 116.7 116 52.6
Sp5g30490 Schrenkiella parvula HOM05D006275 ORTHO05D007839 1.2e-24 116.7 102 50.0
TAR628G1199 Trochodendron aralioides HOM05D006275 ORTHO05D007839 1.2e-24 116.7 119 48.7
CSS0002686 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 1.6e-24 116.3 99 54.5
CSS0030866 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 1.6e-24 116.3 99 54.5
Nitab4.5_0003265g0060 Nicotiana tabacum HOM05D006275 ORTHO05D007839 1.6e-24 116.3 108 52.8
PSO764G0160 Papaver somniferum HOM05D006275 ORTHO05D007839 1.6e-24 116.3 116 51.7
Aa31LG4G5560 Aethionema arabicum HOM05D006275 ORTHO05D007839 2.0e-24 115.9 102 51.0
Cfa013858 Carpinus fangiana HOM05D006275 ORTHO05D007839 2.0e-24 115.9 109 49.5
HanXRQChr09g0268981 Helianthus annuus HOM05D006275 ORTHO05D007839 2.0e-24 115.9 115 47.0
THA.LOC104811376 Tarenaya hassleriana HOM05D006275 ORTHO05D007839 2.0e-24 115.9 99 53.5
EL10Ac1g00643 Beta vulgaris HOM05D006275 ORTHO05D007839 2.7e-24 115.5 95 52.6
Dinv39443 Davidia involucrata HOM05D006275 ORTHO05D007839 2.7e-24 115.5 99 54.5
Medtr1g022450 Medicago truncatula HOM05D006275 ORTHO05D007839 2.7e-24 115.5 105 51.4
Nitab4.5_0009228g0020 Nicotiana tabacum HOM05D006275 ORTHO05D007839 2.7e-24 115.5 101 52.5
Glyma.17G252600 Glycine max HOM05D006275 ORTHO05D007839 3.5e-24 115.2 98 55.1
Actinidia37997 Actinidia chinensis HOM05D006275 ORTHO05D007839 4.6e-24 114.8 82 59.8
Lsat_1_v5_gn_4_117720 Lactuca sativa HOM05D006275 ORTHO05D007839 4.6e-24 114.8 105 50.5
Psat6g009240 Pisum sativum HOM05D006275 ORTHO05D007839 4.6e-24 114.8 103 52.4
Migut.N00484 Erythranthe guttata HOM05D006275 ORTHO05D007839 6.0e-24 114.4 113 48.7
Glyma.14G072400 Glycine max HOM05D006275 ORTHO05D007839 6.0e-24 114.4 98 53.1
TPR.G20152 Trifolium pratense HOM05D006275 ORTHO05D007839 7.8e-24 114.0 88 54.5
arahy.Tifrunner.gnm1.ann1.RSD13X Arachis hypogaea HOM05D006275 ORTHO05D007839 1.0e-23 113.6 100 52.0
arahy.Tifrunner.gnm1.ann1.T5GRUU Arachis hypogaea HOM05D006275 ORTHO05D007839 1.0e-23 113.6 100 52.0
arahy.Tifrunner.gnm1.ann1.W9L06J Arachis hypogaea HOM05D006275 ORTHO05D007839 1.7e-23 112.8 84 54.8
arahy.Tifrunner.gnm1.ann1.WR55YC Arachis hypogaea HOM05D006275 ORTHO05D007839 1.7e-23 112.8 84 54.8
FAN20G1429 Fragaria x ananassa HOM05D006275 ORTHO05D007839 1.7e-23 112.8 67 68.7
Lj5g0023115 Lotus japonicus HOM05D006275 ORTHO05D007839 1.7e-23 112.8 108 50.0
Migut.J00614 Erythranthe guttata HOM05D006275 ORTHO05D007839 2.3e-23 112.5 114 50.0
Rhsim07G0241500 Rhododendron simsii HOM05D006275 ORTHO05D007839 2.3e-23 112.5 106 51.9
RhsimUnG0236400 Rhododendron simsii HOM05D006275 ORTHO05D007839 2.3e-23 112.5 106 51.9
TWI36G0893 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 3.0e-23 112.1 119 43.7
CSS0039262 Camellia sinensis var. sinensis HOM05D006275 ORTHO05D007839 3.9e-23 111.7 95 54.7
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 1.6e-21 106.3 93 50.5
MCO12G376 Micromonas commoda HOM05D006275 ORTHO05D007839 3.1e-20 102.1 86 52.3
Zm00001eb159080 Zea mays HOM05D006275 ORTHO05D007839 3.4e-19 98.6 87 48.3
Os01g0633000 Oryza sativa ssp. japonica HOM05D006275 ORTHO05D007839 3.7e-18 95.1 83 48.2
Cre08.g365400 Chlamydomonas reinhardtii HOM05D006275 ORTHO05D007839 1.6e-16 89.7 107 41.1
BcaC09g48250 Brassica carinata HOM05D006275 ORTHO05D007839 1.9e-14 82.8 53 60.4
QL02p009087 Quercus lobata HOM05D006275 ORTHO05D007839 5.6e-14 81.3 76 50.0
Duzib041G0262 Durio zibethinus HOM05D006275 ORTHO05D007839 1.2e-13 80.1 75 50.7
TWI56G0783 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 7.1e-09 64.3 49 51.0
Gohir.D12G058400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 3.5e-08 62.0 42 61.9
Gorai.010G176600 Gossypium raimondii HOM05D006275 ORTHO05D007839 1.9e-06 56.2 40 60.0


User provided reference genes

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