Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO116G0403 Selaginella moellendorffii HOM05D007575 ORTHO05D009611 0.0e+00 1146.0 673 100.0
CAN.G710.64 Capsicum annuum HOM05D007575 ORTHO05D009611 7.9e-36 156.4 531 26.6
Rhsim09G0032600 Rhododendron simsii HOM05D007575 ORTHO05D009611 4.3e-34 150.6 538 27.1
ATR0743G244 Amborella trichopoda HOM05D007575 ORTHO05D009611 9.6e-34 149.4 541 27.4
Eucgr.A00245 Eucalyptus grandis HOM05D007575 ORTHO05D009611 9.6e-34 149.4 549 26.8
Thecc.04G183800 Theobroma cacao HOM05D007575 ORTHO05D009611 2.8e-33 147.9 555 30.5
Pp3c20_2320 Physcomitrium patens HOM05D007575 ORTHO05D009611 3.6e-33 147.5 530 30.0
CSS0031716 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 3.1e-32 144.4 567 28.0
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 4.0e-32 144.1 532 29.7
vmacro00586 Vaccinium macrocarpon HOM05D007575 ORTHO05D009611 9.0e-32 142.9 553 29.1
Sopen09g036470 Solanum pennellii HOM05D007575 ORTHO05D009611 3.4e-31 141.0 515 25.2
Carub.0004s2568 Capsella rubella HOM05D007575 ORTHO05D009611 4.5e-31 140.6 549 25.3
THA.LOC104803562 Tarenaya hassleriana HOM05D007575 ORTHO05D009611 4.5e-31 140.6 562 25.1
GSVIVG01013567001 Vitis vinifera HOM05D007575 ORTHO05D009611 5.8e-31 140.2 575 26.8
Duzib151G0056 Durio zibethinus HOM05D007575 ORTHO05D009611 1.7e-30 138.7 549 26.2
Gohir.A10G134800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 2.9e-30 137.9 534 24.7
Gohir.D10G131800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 3.8e-30 137.5 543 24.9
MD04G1038600 Malus domestica HOM05D007575 ORTHO05D009611 4.9e-30 137.1 533 25.1
QL10p045159 Quercus lobata HOM05D007575 ORTHO05D009611 4.9e-30 137.1 547 26.3
TAR633G2419 Trochodendron aralioides HOM05D007575 ORTHO05D009611 6.4e-30 136.7 542 27.1
Migut.N00470 Erythranthe guttata HOM05D007575 ORTHO05D009611 8.4e-30 136.3 518 25.9
Gorai.011G145500 Gossypium raimondii HOM05D007575 ORTHO05D009611 8.4e-30 136.3 543 24.9
ECA233G3130 Erigeron canadensis HOM05D007575 ORTHO05D009611 1.1e-29 136.0 532 26.1
Manes.11G115700 Manihot esculenta HOM05D007575 ORTHO05D009611 1.1e-29 136.0 529 25.5
Atru.chr3.1619 Acer truncatum HOM05D007575 ORTHO05D009611 1.4e-29 135.6 544 27.2
PGR083G2249 Punica granatum HOM05D007575 ORTHO05D009611 9.3e-29 132.9 540 29.4
CiPaw.01G103900 Carya illinoinensis HOM05D007575 ORTHO05D009611 1.2e-28 132.5 563 26.8
Gohir.A05G326900 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.2e-28 132.5 560 25.0
Cc03_g13380 Coffea canephora HOM05D007575 ORTHO05D009611 2.1e-28 131.7 529 25.5
Prupe.1G189300 Prunus persica HOM05D007575 ORTHO05D009611 3.5e-28 131.0 551 24.7
C04p70190 Brassica napus HOM05D007575 ORTHO05D009611 4.6e-28 130.6 539 26.9
Thhalv10001393m.g Eutrema salsugineum HOM05D007575 ORTHO05D009611 4.6e-28 130.6 546 24.7
Sed0001943 Sechium edule HOM05D007575 ORTHO05D009611 4.6e-28 130.6 532 26.1
CDE09G0236 Ceratophyllum demersum HOM05D007575 ORTHO05D009611 6.0e-28 130.2 508 27.0
Actinidia39859 Actinidia chinensis HOM05D007575 ORTHO05D009611 1.0e-27 129.4 548 27.4
Cfa015783 Carpinus fangiana HOM05D007575 ORTHO05D009611 1.3e-27 129.0 565 24.4
MBI08_g10298_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 1.3e-27 129.0 567 26.8
Potri.017G036600 Populus trichocarpa HOM05D007575 ORTHO05D009611 3.0e-27 127.9 545 24.8
Nitab4.5_0004962g0010 Nicotiana tabacum HOM05D007575 ORTHO05D009611 6.7e-27 126.7 460 26.7
SalBow6G5467 Salvia bowleyana HOM05D007575 ORTHO05D009611 6.7e-27 126.7 549 25.1
AT2G43210 Arabidopsis thaliana HOM05D007575 ORTHO05D009611 8.7e-27 126.3 556 25.0
Oeu050351.1 Olea europaea HOM05D007575 ORTHO05D009611 8.7e-27 126.3 536 25.4
Sp4g25330 Schrenkiella parvula HOM05D007575 ORTHO05D009611 8.7e-27 126.3 547 26.3
BcaNung07370 Brassica carinata HOM05D007575 ORTHO05D009611 1.5e-26 125.6 457 27.8
Haze_00711 Corylus avellana HOM05D007575 ORTHO05D009611 1.5e-26 125.6 556 24.3
Solyc09g098550.4 Solanum lycopersicum HOM05D007575 ORTHO05D009611 1.9e-26 125.2 448 25.0
CANSAT78G0404 Cannabis sativa HOM05D007575 ORTHO05D009611 2.5e-26 124.8 534 23.2
Aa31LG1G25020 Aethionema arabicum HOM05D007575 ORTHO05D009611 3.3e-26 124.4 567 24.9
Peaxi162Scf00286g00233 Petunia axillaris HOM05D007575 ORTHO05D009611 3.3e-26 124.4 533 25.5
Lj6A70T54 Lonicera japonica HOM05D007575 ORTHO05D009611 5.6e-26 123.6 630 24.3
Nitab4.5_0001049g0060 Nicotiana tabacum HOM05D007575 ORTHO05D009611 5.6e-26 123.6 478 27.6
SGA_v2.0_scaffold406G51053 Striga asiatica HOM05D007575 ORTHO05D009611 7.4e-26 123.2 529 24.8
AL4G41870 Arabidopsis lyrata HOM05D007575 ORTHO05D009611 1.3e-25 122.5 562 24.0
ClCG08G004240 Citrullus lanatus HOM05D007575 ORTHO05D009611 1.3e-25 122.5 531 26.0
Sabra07G0100200 Salix brachista HOM05D007575 ORTHO05D009611 1.3e-25 122.5 530 25.1
HanXRQChr02g0057801 Helianthus annuus HOM05D007575 ORTHO05D009611 1.6e-25 122.1 542 24.7
COL.COLO4_24385 Corchorus olitorius HOM05D001792 ORTHO05D001821 2.8e-25 121.3 309 30.4
MELO3C011621.2 Cucumis melo HOM05D007575 ORTHO05D009611 2.8e-25 121.3 544 25.2
Gorai.009G350900 Gossypium raimondii HOM05D007575 ORTHO05D009611 8.1e-25 119.8 560 24.6
FAN17G1632 Fragaria x ananassa HOM05D007575 ORTHO05D009611 1.1e-24 119.4 586 26.1
Nn1g09745 Nelumbo nucifera HOM05D007575 ORTHO05D009611 1.4e-24 119.0 568 26.1
MSTRG.24588 Avicennia marina HOM05D007575 ORTHO05D009611 1.8e-24 118.6 535 23.9
Gohir.D05G326300 Gossypium hirsutum HOM05D007575 ORTHO05D009611 2.4e-24 118.2 560 24.6
Lsat_1_v5_gn_6_54841 Lactuca sativa HOM05D007575 ORTHO05D009611 5.3e-24 117.1 522 22.6
CARHR138270 Cardamine hirsuta HOM05D007575 ORTHO05D009611 9.0e-24 116.3 468 31.6
Sabra17G0024000 Salix brachista HOM05D007575 ORTHO05D009611 1.2e-23 115.9 512 24.0
CsaV3_6G003720 Cucumis sativus L. HOM05D007575 ORTHO05D009611 2.0e-23 115.2 534 24.9
FvH4_4g11270 Fragaria vesca HOM05D007575 ORTHO05D009611 2.6e-23 114.8 596 27.0
A04p32490 Brassica napus HOM05D007575 ORTHO05D009611 3.4e-23 114.4 581 24.3
HPP92_002813 Vanilla planifolia HOM05D007575 ORTHO05D009611 3.4e-23 114.4 515 24.9
Ciclev10019508m.g Citrus clementina HOM05D007575 ORTHO05D009611 4.5e-23 114.0 574 23.7
Os11g0293900 Oryza sativa ssp. japonica HOM05D007575 ORTHO05D009611 1.3e-22 112.5 547 25.4
FAN07G0850 Fragaria x ananassa HOM05D007575 ORTHO05D009611 1.7e-22 112.1 594 23.6
FAN22G0659 Fragaria x ananassa HOM05D007575 ORTHO05D009611 2.2e-22 111.7 581 25.1
DCAR_027534 Daucus carota HOM05D007575 ORTHO05D009611 3.8e-22 110.9 530 23.6
RcHm_v2.0_Chr4g0407361 Rosa chinensis HOM05D007575 ORTHO05D009611 4.9e-22 110.5 588 24.3
unitig_8.g3630 Utricularia gibba HOM05D007575 ORTHO05D009611 7.1e-21 106.7 527 23.3
Mapoly0164s0007 Marchantia polymorpha HOM05D007575 ORTHO05D009611 1.0e-19 102.8 496 26.6
Potri.007G123800 Populus trichocarpa HOM05D007575 ORTHO05D009611 3.0e-19 101.3 448 25.2
HPP92_002869 Vanilla planifolia HOM05D007575 ORTHO05D009611 3.9e-19 100.9 515 23.9
PSO210G6745 Papaver somniferum HOM05D007575 ORTHO05D009611 1.6e-17 95.5 221 33.5
Hma1.2p1_1477F.1_g285910 Hydrangea macrophylla HOM05D007575 ORTHO05D009611 2.8e-17 94.7 213 33.8
Actinidia11312 Actinidia chinensis HOM05D007575 ORTHO05D009611 1.1e-16 92.8 550 25.5
SEGI_13760 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 1.1e-16 92.8 385 23.4
Lj6A61T39 Lonicera japonica HOM05D007575 ORTHO05D009611 1.6e-12 79.0 370 23.8
Zm00001eb198990 Zea mays HOM05D007575 ORTHO05D009611 1.6e-12 79.0 227 31.3
SEGI_03248 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 2.1e-12 78.6 162 35.8
AagrBONN_evm.TU.Sc2ySwM_344.3290 Anthoceros agrestis HOM05D007575 ORTHO05D009611 5.1e-11 73.9 367 24.3
Eucgr.A00051 Eucalyptus grandis HOM05D007575 ORTHO05D009611 2.5e-10 71.6 159 33.3
PSO832G0541 Papaver somniferum HOM05D007575 ORTHO05D009611 7.4e-10 70.1 198 30.3
CBR_g123 Chara braunii HOM05D007575 ORTHO05D009611 8.2e-09 66.6 301 24.9
SalBow5G2148 Salvia bowleyana HOM05D007575 ORTHO05D009611 2.6e-07 61.6 120 34.2
SalBow5G4021 Salvia bowleyana HOM05D007575 ORTHO05D009611 2.6e-07 61.6 120 34.2
TAR633G1182 Trochodendron aralioides HOM05D007575 ORTHO05D009611 1.0e-06 59.7 172 30.2
CSS0007449 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 3.8e-06 57.8 53 47.2


User provided reference genes

Program Settings