Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO116G0147 Selaginella moellendorffii HOM05D000416 ORTHO05D000322 6.6e-188 660.6 348 100.0
SMO340G0292 Selaginella moellendorffii HOM05D000416 ORTHO05D000322 2.0e-30 137.5 317 32.8
SMO364G0074 Selaginella moellendorffii HOM05D000416 ORTHO05D000322 9.7e-14 82.0 315 27.3
Sabra08G0158500 Salix brachista HOM05D000416 ORTHO05D000322 1.7e-10 71.2 243 26.7
Nitab4.5_0002031g0080 Nicotiana tabacum HOM05D000416 ORTHO05D000322 6.5e-10 69.3 279 26.2
Atru.chr13.1892 Acer truncatum HOM05D000416 ORTHO05D000322 1.9e-09 67.8 250 26.4
QL12p022182 Quercus lobata HOM05D000416 ORTHO05D000322 2.5e-09 67.4 258 27.1
Nitab4.5_0001643g0030 Nicotiana tabacum HOM05D000416 ORTHO05D000322 4.2e-09 66.6 279 25.4
Peaxi162Scf00196g00078 Petunia axillaris HOM05D000416 ORTHO05D000322 4.2e-09 66.6 277 23.5
Lsat_1_v5_gn_8_71760 Lactuca sativa HOM05D000416 ORTHO05D000322 5.5e-09 66.2 255 27.1
AT1G03220 Arabidopsis thaliana HOM05D000416 ORTHO05D000322 7.2e-09 65.9 254 24.0
CAN.G183.14 Capsicum annuum HOM05D000416 ORTHO05D000322 7.2e-09 65.9 246 24.4
Lsat_1_v5_gn_8_71800 Lactuca sativa HOM05D000416 ORTHO05D000322 7.2e-09 65.9 257 28.0
Potri.008G203100 Populus trichocarpa HOM05D000416 ORTHO05D000322 7.2e-09 65.9 246 24.4
AUR62030101 Chenopodium quinoa HOM05D000416 ORTHO05D000322 1.2e-08 65.1 251 25.9
unitig_578.g15712 Utricularia gibba HOM05D000416 ORTHO05D000322 1.2e-08 65.1 275 24.0
Solyc01g080020.2 Solanum lycopersicum HOM05D000416 ORTHO05D000322 1.6e-08 64.7 247 23.9
Haze_04729 Corylus avellana HOM05D000416 ORTHO05D000322 2.1e-08 64.3 256 25.0
Eucgr.H01513 Eucalyptus grandis HOM05D000416 ORTHO05D000322 2.1e-08 64.3 254 24.4
PSO170G6611 Papaver somniferum HOM05D000416 ORTHO05D000322 2.1e-08 64.3 254 25.6
Cfa006123 Carpinus fangiana HOM05D000416 ORTHO05D000322 2.7e-08 63.9 256 25.0
Lj3C715T9 Lonicera japonica HOM05D000416 ORTHO05D000322 2.7e-08 63.9 305 23.6
Medtr2g022380 Medicago truncatula HOM05D000416 ORTHO05D000322 2.7e-08 63.9 315 26.0
PSO407G0127 Papaver somniferum HOM05D000416 ORTHO05D000322 2.7e-08 63.9 257 23.0
Phvul.001G149500 Phaseolus vulgaris HOM05D000416 ORTHO05D000322 2.7e-08 63.9 255 26.7
QL06p004120 Quercus lobata HOM05D000416 ORTHO05D000322 2.7e-08 63.9 258 26.0
Sopen01g031790 Solanum pennellii HOM05D000416 ORTHO05D000322 2.7e-08 63.9 241 22.8
Sopen01g042310 Solanum pennellii HOM05D000416 ORTHO05D000322 2.7e-08 63.9 308 25.0
arahy.Tifrunner.gnm1.ann1.8KRZ7W Arachis hypogaea HOM05D000416 ORTHO05D000322 3.6e-08 63.5 309 25.6
Gohir.A05G317008 Gossypium hirsutum HOM05D000416 ORTHO05D000322 3.6e-08 63.5 227 23.8
PSO017G4777 Papaver somniferum HOM05D000416 ORTHO05D000322 3.6e-08 63.5 254 24.8
Solyc01g098770.1 Solanum lycopersicum HOM05D000416 ORTHO05D000322 3.6e-08 63.5 249 26.1
Gohir.D05G318600 Gossypium hirsutum HOM05D000416 ORTHO05D000322 4.7e-08 63.2 231 23.4
Gorai.004G215700 Gossypium raimondii HOM05D000416 ORTHO05D000322 4.7e-08 63.2 259 25.5
SGA_v2.0_scaffold39G15330 Striga asiatica HOM05D000416 ORTHO05D000322 4.7e-08 63.2 262 24.8
AUR62038209 Chenopodium quinoa HOM05D000416 ORTHO05D000322 6.1e-08 62.8 247 25.1
Lj1g0010402 Lotus japonicus HOM05D000416 ORTHO05D000322 6.1e-08 62.8 306 27.1
Glyma.03G151900 Glycine max HOM05D000416 ORTHO05D000322 8.0e-08 62.4 259 27.0
Glyma.17G016600 Glycine max HOM05D000416 ORTHO05D000322 8.0e-08 62.4 265 25.3
Lj3C715T10 Lonicera japonica HOM05D000416 ORTHO05D000322 8.0e-08 62.4 256 26.2
Peaxi162Scf00037g00015 Petunia axillaris HOM05D000416 ORTHO05D000322 8.0e-08 62.4 248 25.0
VMungo1383G1309 Vigna mungo HOM05D000416 ORTHO05D000322 8.0e-08 62.4 293 26.3
CAN.G1132.8 Capsicum annuum HOM05D000416 ORTHO05D000322 1.0e-07 62.0 241 25.7
Medtr2g022370 Medicago truncatula HOM05D000416 ORTHO05D000322 1.0e-07 62.0 314 26.1
Nitab4.5_0000267g0120 Nicotiana tabacum HOM05D000416 ORTHO05D000322 1.0e-07 62.0 247 23.1
SGA_v2.0_scaffold80G25937 Striga asiatica HOM05D000416 ORTHO05D000322 1.0e-07 62.0 321 23.1
AT1G03230 Arabidopsis thaliana HOM05D000416 ORTHO05D000322 1.4e-07 61.6 279 25.1
Carub.0004s0814 Capsella rubella HOM05D000416 ORTHO05D000322 1.4e-07 61.6 272 24.3
HanXRQChr10g0310451 Helianthus annuus HOM05D000416 ORTHO05D000322 1.4e-07 61.6 230 24.3
EL10Ac9g21173 Beta vulgaris HOM05D000416 ORTHO05D000322 1.8e-07 61.2 281 22.4
ECA236G1451 Erigeron canadensis HOM05D000416 ORTHO05D000322 1.8e-07 61.2 267 26.6
Lj3C751T10 Lonicera japonica HOM05D000416 ORTHO05D000322 1.8e-07 61.2 256 25.8
PSO170G0968 Papaver somniferum HOM05D000416 ORTHO05D000322 1.8e-07 61.2 253 23.3
Peaxi162Scf00071g00073 Petunia axillaris HOM05D000416 ORTHO05D000322 1.8e-07 61.2 240 25.4
PGSC0003DMG400028605 Solanum tuberosum HOM05D000416 ORTHO05D000322 1.8e-07 61.2 306 25.5
Carub.0001s0234 Capsella rubella HOM05D000416 ORTHO05D000322 2.3e-07 60.8 254 24.0
DCAR_023257 Daucus carota HOM05D000416 ORTHO05D000322 2.3e-07 60.8 270 24.4
ECA233G2173 Erigeron canadensis HOM05D000416 ORTHO05D000322 2.3e-07 60.8 249 25.3
Thecc.04G223100 Theobroma cacao HOM05D000416 ORTHO05D000322 2.3e-07 60.8 243 23.9
Cfa006555 Carpinus fangiana HOM05D000416 ORTHO05D000322 3.0e-07 60.5 243 26.3
Cc01_g19660 Coffea canephora HOM05D000416 ORTHO05D000322 3.0e-07 60.5 244 25.8
ECA234G1975 Erigeron canadensis HOM05D000416 ORTHO05D000322 3.0e-07 60.5 166 27.7
Migut.G00296 Erythranthe guttata HOM05D000416 ORTHO05D000322 3.0e-07 60.5 256 25.0
Gorai.009G341600 Gossypium raimondii HOM05D000416 ORTHO05D000322 3.0e-07 60.5 228 22.8
COL.COLO4_21659 Corchorus olitorius HOM05D000416 ORTHO05D000322 4.0e-07 60.1 250 23.6
Lsat_1_v5_gn_8_71860 Lactuca sativa HOM05D000416 ORTHO05D000322 4.0e-07 60.1 257 26.1
Sp1g02230 Schrenkiella parvula HOM05D000416 ORTHO05D000322 4.0e-07 60.1 293 24.2
Sopen05g005500 Solanum pennellii HOM05D000040 ORTHO05D000759 4.0e-07 60.1 311 24.4
THA.LOC104801229 Tarenaya hassleriana HOM05D000416 ORTHO05D000322 4.0e-07 60.1 243 23.9
TWI56G0798 Tripterygium wilfordii HOM05D000416 ORTHO05D000322 4.0e-07 60.1 242 24.8
A08p37410 Brassica napus HOM05D000416 ORTHO05D000322 5.2e-07 59.7 249 22.9
C08p00500 Brassica napus HOM05D000416 ORTHO05D000322 5.2e-07 59.7 249 23.3
BraA08t35638Z Brassica rapa HOM05D000416 ORTHO05D000322 5.2e-07 59.7 255 23.1
Cpa.g.sc52.14 Carica papaya HOM05D000416 ORTHO05D000322 5.2e-07 59.7 236 23.3
AUR62028741 Chenopodium quinoa HOM05D000416 ORTHO05D000322 5.2e-07 59.7 261 22.6
Prupe.6G329000 Prunus persica HOM05D000416 ORTHO05D000322 5.2e-07 59.7 244 24.2
PGR044G2686 Punica granatum HOM05D000416 ORTHO05D000322 5.2e-07 59.7 253 23.3
ECA236G0734 Erigeron canadensis HOM05D000416 ORTHO05D000322 6.8e-07 59.3 262 26.0
Eucgr.H03585 Eucalyptus grandis HOM05D000416 ORTHO05D000322 6.8e-07 59.3 241 24.1
Thhalv10007672m.g Eutrema salsugineum HOM05D000416 ORTHO05D000322 6.8e-07 59.3 249 22.9
FvH4_4g14640 Fragaria vesca HOM05D000416 ORTHO05D000322 6.8e-07 59.3 255 23.9
FAN12G4311 Fragaria x ananassa HOM05D000416 ORTHO05D000322 6.8e-07 59.3 255 23.9
Gohir.A08G185600 Gossypium hirsutum HOM05D000416 ORTHO05D000322 6.8e-07 59.3 259 24.3
PGSC0003DMG400033123 Solanum tuberosum HOM05D000416 ORTHO05D000322 6.8e-07 59.3 247 23.1
SGA_v2.0_scaffold39G15333 Striga asiatica HOM05D000416 ORTHO05D000322 6.8e-07 59.3 239 25.1
THA.LOC104801233 Tarenaya hassleriana HOM05D000416 ORTHO05D000322 6.8e-07 59.3 248 23.8
THA.LOC104820120 Tarenaya hassleriana HOM05D000416 ORTHO05D000322 6.8e-07 59.3 141 29.8
Aa31LG1G9330 Aethionema arabicum HOM05D000416 ORTHO05D000322 8.8e-07 58.9 252 23.8
AUR62008163 Chenopodium quinoa HOM05D000416 ORTHO05D000322 8.8e-07 58.9 264 22.7
ECA234G1271 Erigeron canadensis HOM05D000416 ORTHO05D000322 8.8e-07 58.9 167 25.1
ECA236G3869 Erigeron canadensis HOM05D000416 ORTHO05D000322 8.8e-07 58.9 256 27.3
Gohir.D08G203700 Gossypium hirsutum HOM05D000416 ORTHO05D000322 8.8e-07 58.9 259 24.7
Peaxi162Scf00196g00613 Petunia axillaris HOM05D000416 ORTHO05D000322 8.8e-07 58.9 259 23.6
AL1G12730 Arabidopsis lyrata HOM05D000416 ORTHO05D000322 1.2e-06 58.5 250 23.2
arahy.Tifrunner.gnm1.ann1.ZS19NB Arachis hypogaea HOM05D000416 ORTHO05D000322 1.2e-06 58.5 260 25.4
ClCG05G005400 Citrullus lanatus HOM05D000416 ORTHO05D000322 1.2e-06 58.5 255 24.3
DCAR_023258 Daucus carota HOM05D000416 ORTHO05D000322 1.2e-06 58.5 258 23.6
Duzib133G1049 Durio zibethinus HOM05D000416 ORTHO05D000322 1.2e-06 58.5 258 25.2
ECA236G2637 Erigeron canadensis HOM05D000416 ORTHO05D000322 1.2e-06 58.5 262 24.4
Cpa.g.sc48.24 Carica papaya HOM05D000416 ORTHO05D000322 1.5e-06 58.2 245 24.9
Lj3P715T49 Lonicera japonica HOM05D000416 ORTHO05D000322 1.5e-06 58.2 255 26.3
Medtr2g022320 Medicago truncatula HOM05D000416 ORTHO05D000322 1.5e-06 58.2 318 23.9
Solyc05g009680.1 Solanum lycopersicum HOM05D000040 ORTHO05D000759 1.5e-06 58.2 311 24.1
BolC8t46850H Brassica oleracea HOM05D000416 ORTHO05D000322 2.0e-06 57.8 249 22.9
ECA236G2270 Erigeron canadensis HOM05D000416 ORTHO05D000322 2.0e-06 57.8 171 27.5
HanXRQChr10g0311411 Helianthus annuus HOM05D000416 ORTHO05D000322 2.0e-06 57.8 180 28.3
RcHm_v2.0_Chr6g0291311 Rosa chinensis HOM05D000416 ORTHO05D000322 2.0e-06 57.8 259 24.7
HanXRQChr10g0310671 Helianthus annuus HOM05D000416 ORTHO05D000322 2.6e-06 57.4 236 25.8
HanXRQChr10g0310681 Helianthus annuus HOM05D000416 ORTHO05D000322 2.6e-06 57.4 227 25.6
Medtr2g022350 Medicago truncatula HOM05D000416 ORTHO05D000322 2.6e-06 57.4 316 24.1
Sabra06G0051400 Salix brachista HOM05D000416 ORTHO05D000322 2.6e-06 57.4 256 22.3
DCAR_012467 Daucus carota HOM05D000416 ORTHO05D000322 3.4e-06 57.0 321 23.1
DCAR_012469 Daucus carota HOM05D000416 ORTHO05D000322 3.4e-06 57.0 245 24.1
HanXRQChr03g0080191 Helianthus annuus HOM05D000416 ORTHO05D000322 3.4e-06 57.0 253 24.5
Medtr2g022430 Medicago truncatula HOM05D000416 ORTHO05D000322 3.4e-06 57.0 309 23.6
PSO210G3849 Papaver somniferum HOM05D000416 ORTHO05D000322 3.4e-06 57.0 247 25.5
QL06p003961 Quercus lobata HOM05D000416 ORTHO05D000322 3.4e-06 57.0 240 23.8
EL10Ac3g06372 Beta vulgaris HOM05D000416 ORTHO05D000322 4.4e-06 56.6 239 24.3
ECA234G0788 Erigeron canadensis HOM05D000416 ORTHO05D000322 4.4e-06 56.6 166 27.7
FAN12G0740 Fragaria x ananassa HOM05D000416 ORTHO05D000322 4.4e-06 56.6 233 24.5
HanXRQChr10g0311731 Helianthus annuus HOM05D000416 ORTHO05D000322 4.4e-06 56.6 241 24.5
Oeu042045.1 Olea europaea HOM05D000040 ORTHO05D000759 4.4e-06 56.6 315 22.9
PSO832G0246 Papaver somniferum HOM05D000416 ORTHO05D000322 4.4e-06 56.6 247 25.5
Psat1g182240 Pisum sativum HOM05D000416 ORTHO05D000322 4.4e-06 56.6 268 23.5
ECA234G1027 Erigeron canadensis HOM05D004745 ORTHO05D005626 5.7e-06 56.2 237 25.3
Migut.G00295 Erythranthe guttata HOM05D000416 ORTHO05D000322 5.7e-06 56.2 229 24.0
Lsat_1_v5_gn_9_4161 Lactuca sativa HOM05D000416 ORTHO05D000322 5.7e-06 56.2 252 23.8
Rhsim13G0023800 Rhododendron simsii HOM05D000416 ORTHO05D000322 5.7e-06 56.2 258 26.0
Aa31LG1G9320 Aethionema arabicum HOM05D000416 ORTHO05D000322 7.5e-06 55.8 252 23.0
BcaC07g36974 Brassica carinata HOM05D000416 ORTHO05D000322 7.5e-06 55.8 273 23.4
CARHR002340 Cardamine hirsuta HOM05D000416 ORTHO05D000322 7.5e-06 55.8 249 22.5
Lj3C752T2 Lonicera japonica HOM05D000416 ORTHO05D000322 7.5e-06 55.8 305 23.6
TPR.G1530 Trifolium pratense HOM05D006883 ORTHO05D008624 7.5e-06 55.8 331 23.6
ECA234G2573 Erigeron canadensis HOM05D000416 ORTHO05D000322 9.8e-06 55.5 239 26.4
FAN07G2822 Fragaria x ananassa HOM05D000416 ORTHO05D000322 9.8e-06 55.5 255 23.5
FAN12G4003 Fragaria x ananassa HOM05D000416 ORTHO05D000322 9.8e-06 55.5 253 23.7
Nn1g02172 Nelumbo nucifera HOM05D000416 ORTHO05D000322 9.8e-06 55.5 175 26.3
Rhsim02G0020300 Rhododendron simsii HOM05D000416 ORTHO05D000322 9.8e-06 55.5 253 24.1


User provided reference genes

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