Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO116G0123 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 0.0e+00 1262.3 632 100.0
SMO195G0003 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 2.7e-296 1021.5 599 88.8
SMO174G0009 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 1.3e-40 172.2 506 29.1
SEGI_31852 Sequoiadendron giganteum HOM05D005963 ORTHO05D006869 1.9e-36 158.3 482 28.8
SMO276G0013 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 9.6e-36 156.0 348 33.9
SMO358G0565 Selaginella moellendorffii HOM05D001046 ORTHO05D007174 4.5e-33 147.1 487 28.7
SMO166G0034 Selaginella moellendorffii HOM05D053993 ORTHO05D374452 3.9e-29 134.0 163 42.3
Lj2g0022710 Lotus japonicus HOM05D005963 ORTHO05D006869 1.3e-27 129.0 487 27.3
ATR0661G117 Amborella trichopoda HOM05D005963 ORTHO05D006869 2.8e-27 127.9 484 26.2
arahy.Tifrunner.gnm1.ann1.G2RQNR Arachis hypogaea HOM05D005963 ORTHO05D006869 2.6e-25 121.3 501 25.9
arahy.Tifrunner.gnm1.ann1.R4K09I Arachis hypogaea HOM05D005963 ORTHO05D006869 5.9e-25 120.2 502 25.7
Psat1g106960 Pisum sativum HOM05D005963 ORTHO05D006869 3.2e-23 114.4 503 26.0
Phvul.004G124000 Phaseolus vulgaris HOM05D005963 ORTHO05D006869 4.2e-23 114.0 485 25.8
Sp6g14050 Schrenkiella parvula HOM05D005963 ORTHO05D006869 7.2e-23 113.2 482 26.6
Sc25g0000220 Simmondsia chinensis HOM05D005963 ORTHO05D006869 2.1e-22 111.7 343 29.7
VMungo0464G1720 Vigna mungo HOM05D005963 ORTHO05D006869 2.1e-22 111.7 489 25.8
CSS0028871 Camellia sinensis var. sinensis HOM05D005963 ORTHO05D006869 3.6e-22 110.9 449 26.7
Carub.0008s1182 Capsella rubella HOM05D005963 ORTHO05D006869 4.6e-22 110.5 476 25.6
AL8G26090 Arabidopsis lyrata HOM05D005963 ORTHO05D006869 2.3e-21 108.2 485 26.8
Thhalv10015853m.g Eutrema salsugineum HOM05D005963 ORTHO05D006869 2.3e-21 108.2 472 25.6
THA.LOC104825083 Tarenaya hassleriana HOM05D005963 ORTHO05D006869 2.3e-21 108.2 364 28.0
A02p12120 Brassica napus HOM05D005963 ORTHO05D006869 3.0e-21 107.8 480 25.6
Actinidia13537 Actinidia chinensis HOM05D005963 ORTHO05D006869 3.9e-21 107.5 315 29.2
AUR62016071 Chenopodium quinoa HOM05D005963 ORTHO05D006869 3.9e-21 107.5 408 24.0
BraA02t06276Z Brassica rapa HOM05D005963 ORTHO05D006869 5.1e-21 107.1 480 25.6
Actinidia25056 Actinidia chinensis HOM05D005963 ORTHO05D006869 6.7e-21 106.7 294 28.2
ECA232G0907 Erigeron canadensis HOM05D005963 ORTHO05D006869 8.8e-21 106.3 514 24.3
A10p09630 Brassica napus HOM05D005963 ORTHO05D006869 2.0e-20 105.1 466 26.0
BraA10t43044Z Brassica rapa HOM05D005963 ORTHO05D006869 2.0e-20 105.1 466 26.0
Aqoxy7G00515 Aquilegia oxysepala HOM05D005963 ORTHO05D006869 3.3e-20 104.4 465 25.2
BolC9t56999H Brassica oleracea HOM05D005963 ORTHO05D006869 4.3e-20 104.0 466 26.0
CiPaw.04G064800 Carya illinoinensis HOM05D005963 ORTHO05D006869 4.3e-20 104.0 473 26.4
PGR142G0011 Punica granatum HOM05D005963 ORTHO05D006869 4.3e-20 104.0 329 27.1
Glyma.09G149700 Glycine max HOM05D005963 ORTHO05D006869 5.7e-20 103.6 293 28.0
DCAR_018136 Daucus carota HOM05D005963 ORTHO05D006869 9.7e-20 102.8 509 25.5
vmacro22547 Vaccinium macrocarpon HOM05D005963 ORTHO05D006869 9.7e-20 102.8 470 26.4
EL10Ac7g16401 Beta vulgaris HOM05D005963 ORTHO05D006869 1.3e-19 102.4 421 22.8
FAN03G0518 Fragaria x ananassa HOM05D005963 ORTHO05D006869 1.3e-19 102.4 483 25.5
BcaB08g35527 Brassica carinata HOM05D005963 ORTHO05D006869 1.7e-19 102.1 318 29.9
BcaC03g14575 Brassica carinata HOM05D005963 ORTHO05D006869 1.7e-19 102.1 482 26.3
CARHR264680 Cardamine hirsuta HOM05D005963 ORTHO05D006869 2.2e-19 101.7 325 29.2
Potri.012G132300 Populus trichocarpa HOM05D005963 ORTHO05D006869 2.8e-19 101.3 324 29.6
GSVIVG01018456001 Vitis vinifera HOM05D005963 ORTHO05D006869 2.8e-19 101.3 319 28.8
FAN06G4856 Fragaria x ananassa HOM05D005963 ORTHO05D006869 4.8e-19 100.5 485 25.8
SHI13839 Sapria himalayana HOM05D005963 ORTHO05D006869 4.8e-19 100.5 473 26.0
TPR.G26590 Trifolium pratense HOM05D005963 ORTHO05D006869 6.3e-19 100.1 359 27.3
BolC2t08150H Brassica oleracea HOM05D005963 ORTHO05D006869 8.2e-19 99.8 482 26.1
Dinv35132 Davidia involucrata HOM05D005963 ORTHO05D006869 8.2e-19 99.8 292 28.4
Aa31LG3G8240 Aethionema arabicum HOM05D005963 ORTHO05D006869 1.4e-18 99.0 323 25.7
C02p20220 Brassica napus HOM05D005963 ORTHO05D006869 1.4e-18 99.0 482 25.5
Gohir.A12G262600 Gossypium hirsutum HOM05D005963 ORTHO05D006869 1.8e-18 98.6 335 27.5
Lalb_Chr19g0131211 Lupinus albus HOM05D005963 ORTHO05D006869 2.4e-18 98.2 336 26.2
Haze_13797 Corylus avellana HOM05D005963 ORTHO05D006869 3.1e-18 97.8 463 23.8
Duzib205G1443 Durio zibethinus HOM05D005963 ORTHO05D006869 3.1e-18 97.8 364 28.6
CiPaw.03G099400 Carya illinoinensis HOM05D005963 ORTHO05D006869 4.1e-18 97.4 321 28.0
Eucgr.K00183 Eucalyptus grandis HOM05D005963 ORTHO05D006869 4.1e-18 97.4 334 27.2
HanXRQChr14g0433491 Helianthus annuus HOM05D005963 ORTHO05D006869 4.1e-18 97.4 478 23.8
AT5G51800 Arabidopsis thaliana HOM05D005963 ORTHO05D006869 9.1e-18 96.3 482 24.9
Duzib068G1175 Durio zibethinus HOM05D005963 ORTHO05D006869 1.2e-17 95.9 364 27.2
Rhsim03G0174100 Rhododendron simsii HOM05D005963 ORTHO05D006869 1.2e-17 95.9 323 26.9
Sabra12G0099600 Salix brachista HOM05D005963 ORTHO05D006869 1.2e-17 95.9 324 29.0
Gorai.001G047400 Gossypium raimondii HOM05D005963 ORTHO05D006869 1.5e-17 95.5 366 27.0
Gohir.A07G040200 Gossypium hirsutum HOM05D005963 ORTHO05D006869 2.0e-17 95.1 365 26.6
Gohir.D12G263300 Gossypium hirsutum HOM05D005963 ORTHO05D006869 2.0e-17 95.1 335 27.2
Manes.06G140900 Manihot esculenta HOM05D005963 ORTHO05D006869 2.0e-17 95.1 358 26.5
BcaC04g20635 Brassica carinata HOM05D005963 ORTHO05D006869 2.6e-17 94.7 324 27.8
Dinv28513 Davidia involucrata HOM05D005963 ORTHO05D006869 2.6e-17 94.7 313 30.4
Hma1.2p1_0488F.1_g163860 Hydrangea macrophylla HOM05D005963 ORTHO05D006869 2.6e-17 94.7 299 29.8
Peaxi162Scf00192g00613 Petunia axillaris HOM05D005963 ORTHO05D006869 2.6e-17 94.7 459 26.4
COL.COLO4_14220 Corchorus olitorius HOM05D005963 ORTHO05D006869 3.4e-17 94.4 331 28.1
Gorai.008G282200 Gossypium raimondii HOM05D005963 ORTHO05D006869 4.5e-17 94.0 335 27.2
Medtr0007s0220 Medicago truncatula HOM05D005963 ORTHO05D006869 4.5e-17 94.0 338 27.2
QL12p038851 Quercus lobata HOM05D005963 ORTHO05D006869 4.5e-17 94.0 311 27.7
Prupe.2G286400 Prunus persica HOM05D005963 ORTHO05D006869 5.9e-17 93.6 299 27.1
MELO3C006856.2 Cucumis melo HOM05D005963 ORTHO05D006869 7.7e-17 93.2 310 26.5
AUR62021279 Chenopodium quinoa HOM05D005963 ORTHO05D006869 1.0e-16 92.8 408 22.3
FAN06G2356 Fragaria x ananassa HOM05D005963 ORTHO05D006869 1.0e-16 92.8 313 28.4
Thecc.03G166100 Theobroma cacao HOM05D005963 ORTHO05D006869 1.0e-16 92.8 348 27.6
Ah.13g067680 Amaranthus hybridus HOM05D005963 ORTHO05D006869 1.3e-16 92.4 536 23.5
EL10Ac3g05753 Beta vulgaris HOM05D005963 ORTHO05D006869 1.3e-16 92.4 338 23.4
Cc02_g03640 Coffea canephora HOM05D005963 ORTHO05D006869 1.3e-16 92.4 327 26.3
CsaV3_3G016590 Cucumis sativus L. HOM05D005963 ORTHO05D006869 1.3e-16 92.4 311 26.0
Gohir.D07G044301 Gossypium hirsutum HOM05D005963 ORTHO05D006869 1.3e-16 92.4 327 27.5
HanXRQChr15g0486261 Helianthus annuus HOM05D005963 ORTHO05D006869 1.3e-16 92.4 346 25.7
Nitab4.5_0000124g0020 Nicotiana tabacum HOM05D005963 ORTHO05D006869 1.3e-16 92.4 379 26.6
Oeu030146.1 Olea europaea HOM05D005963 ORTHO05D006869 1.3e-16 92.4 294 26.5
Oeu030148.1 Olea europaea HOM05D005963 ORTHO05D006869 1.3e-16 92.4 294 26.5
Nn6g34339 Nelumbo nucifera HOM05D005963 ORTHO05D006869 1.7e-16 92.0 318 27.4
ClCG05G007670 Citrullus lanatus HOM05D005963 ORTHO05D006869 2.2e-16 91.7 308 26.6
PGSC0003DMG400007557 Solanum tuberosum HOM05D005963 ORTHO05D006869 2.2e-16 91.7 368 26.4
FvH4_7g28640 Fragaria vesca HOM05D005963 ORTHO05D006869 3.8e-16 90.9 308 27.3
Hund04676 Selenicereus undatus HOM05D005963 ORTHO05D006869 3.8e-16 90.9 344 25.3
PSO782G2761 Papaver somniferum HOM05D005963 ORTHO05D006869 5.0e-16 90.5 352 25.6
Lsat_1_v5_gn_9_53261 Lactuca sativa HOM05D005963 ORTHO05D006869 8.5e-16 89.7 340 26.2
CAN.G1257.1 Capsicum annuum HOM05D005963 ORTHO05D006869 1.1e-15 89.4 369 26.3
Nitab4.5_0000371g0030 Nicotiana tabacum HOM05D005963 ORTHO05D006869 1.1e-15 89.4 370 27.0
Solyc03g006900.2 Solanum lycopersicum HOM05D005963 ORTHO05D006869 1.1e-15 89.4 325 27.4
TWI14G0479 Tripterygium wilfordii HOM05D005963 ORTHO05D006869 1.1e-15 89.4 302 27.8
MD00G1003400 Malus domestica HOM05D005963 ORTHO05D006869 1.9e-15 88.6 302 25.8
PSO478G0110 Papaver somniferum HOM05D005963 ORTHO05D006869 1.9e-15 88.6 314 27.1
Cpa.g.sc4.183 Carica papaya HOM05D005963 ORTHO05D006869 3.2e-15 87.8 362 27.6
Sopen03g002900 Solanum pennellii HOM05D005963 ORTHO05D006869 3.2e-15 87.8 323 27.2
MD01G1192000 Malus domestica HOM05D005963 ORTHO05D006869 4.2e-15 87.4 306 27.1
FAN01G2646 Fragaria x ananassa HOM05D005963 ORTHO05D006869 7.2e-15 86.7 101 48.5
Sed0018627 Sechium edule HOM05D005963 ORTHO05D006869 7.2e-15 86.7 291 27.5
CDE08G0260 Ceratophyllum demersum HOM05D005963 ORTHO05D006869 1.2e-14 85.9 408 26.0
Ciclev10004233m.g Citrus clementina HOM05D005963 ORTHO05D006869 6.1e-14 83.6 381 25.5
FAN10G3242 Fragaria x ananassa HOM05D005963 ORTHO05D006869 6.1e-14 83.6 101 46.5
RcHm_v2.0_Chr1g0376121 Rosa chinensis HOM05D005963 ORTHO05D006869 6.1e-14 83.6 132 40.9
Lj8C34G2 Lonicera japonica HOM05D005963 ORTHO05D006869 2.3e-13 81.6 298 28.2
FAN03G0902 Fragaria x ananassa HOM05D005963 ORTHO05D006869 2.8e-11 74.7 444 23.4
Ca_05417_v3 Cicer arietinum L. HOM05D005963 ORTHO05D006869 1.1e-10 72.8 135 33.3
Ca_30119_v3 Cicer arietinum L. HOM05D005963 ORTHO05D006869 1.1e-10 72.8 135 33.3
SMO166G0020 Selaginella moellendorffii HOM05D053993 ORTHO05D376709 4.1e-10 70.9 254 24.8
SMO268G0015 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 5.9e-09 67.0 169 29.6
Cre01.g041800 Chlamydomonas reinhardtii HOM05D010267 ORTHO05D010759 2.7e-06 58.2 119 28.6


User provided reference genes

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