Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.5e-198 696.0 375 100.0
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 2.9e-120 436.0 394 71.1
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 4.6e-86 322.4 330 66.1
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 5.5e-39 166.0 329 39.8
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 7.2e-39 165.6 330 38.5
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 5.2e-37 159.5 322 40.7
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 5.2e-37 159.5 326 39.9
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 1.5e-36 157.9 311 40.8
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 2.0e-36 157.5 339 40.1
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 5.7e-36 156.0 332 38.6
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 6.3e-35 152.5 321 39.3
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 8.3e-35 152.1 325 39.1
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 1.1e-34 151.8 307 40.4
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 1.4e-34 151.4 343 36.7
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 4.1e-34 149.8 294 40.5
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 9.1e-34 148.7 315 38.7
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 9.1e-34 148.7 325 37.2
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 1.6e-33 147.9 312 37.8
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 2.0e-33 147.5 322 38.2
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 2.7e-33 147.1 326 37.7
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 3.5e-33 146.7 338 37.9
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 4.5e-33 146.4 301 37.5
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 4.5e-33 146.4 320 37.8
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 5.9e-33 146.0 305 40.7
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 5.9e-33 146.0 322 38.8
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 1.7e-32 144.4 330 38.8
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 1.7e-32 144.4 322 37.3
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 2.2e-32 144.1 335 37.0
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 3.8e-32 143.3 335 37.9
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 5.0e-32 142.9 310 38.7
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 6.5e-32 142.5 343 36.7
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 8.5e-32 142.1 325 37.5
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 1.1e-31 141.7 321 38.0
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 1.1e-31 141.7 322 37.6
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 1.1e-31 141.7 318 37.1
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 1.9e-31 141.0 323 37.8
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 2.5e-31 140.6 304 38.5
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 4.2e-31 139.8 312 38.5
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 4.2e-31 139.8 299 40.5
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 5.5e-31 139.4 356 34.6
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 5.5e-31 139.4 328 38.4
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 1.6e-30 137.9 327 37.9
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 2.1e-30 137.5 323 35.3
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 2.1e-30 137.5 323 39.3
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 6.1e-30 136.0 326 37.1
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 1.4e-29 134.8 323 37.2
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 1.4e-29 134.8 325 35.4
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 1.4e-29 134.8 324 35.2
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 1.4e-29 134.8 321 34.6
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 2.3e-29 134.0 312 35.9
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 3.0e-29 133.7 323 38.7
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 6.8e-29 132.5 323 37.2
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 6.8e-29 132.5 323 37.2
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 1.5e-28 131.3 327 37.3
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 2.0e-28 131.0 324 38.3
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 3.4e-28 130.2 314 36.0
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 7.5e-28 129.0 312 36.5
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 2.8e-27 127.1 325 34.2
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 3.7e-27 126.7 327 35.2
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 3.7e-27 126.7 332 35.8
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 6.3e-27 125.9 290 36.6
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 6.3e-27 125.9 313 35.8
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 1.1e-26 125.2 307 35.2
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 5.4e-26 122.9 297 36.4
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 5.4e-26 122.9 339 34.8
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 5.4e-26 122.9 298 35.2
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 9.1e-26 122.1 321 34.3
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 2.0e-25 120.9 342 35.4
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 2.0e-25 120.9 316 36.1
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 4.5e-25 119.8 304 36.5
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 4.5e-25 119.8 322 34.2
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 1.0e-24 118.6 327 33.6
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 1.7e-24 117.9 324 35.5
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 2.9e-24 117.1 296 38.5
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 6.6e-24 115.9 352 33.5
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 6.6e-24 115.9 352 33.5
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 8.6e-24 115.5 324 34.6
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 8.6e-24 115.5 323 36.2
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 1.9e-23 114.4 327 33.0
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 5.6e-23 112.8 323 35.3
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 7.2e-23 112.5 328 36.9
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 7.2e-23 112.5 282 35.5
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 7.2e-23 112.5 318 34.3
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 1.2e-22 111.7 325 33.5
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 1.6e-22 111.3 310 33.5
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 2.1e-22 110.9 315 33.7
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 4.7e-22 109.8 326 34.4
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 4.7e-22 109.8 242 35.1
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 8.0e-22 109.0 297 34.0
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 1.0e-21 108.6 347 33.4
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 8.9e-21 105.5 342 32.7
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 8.9e-21 105.5 325 33.5
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 1.5e-20 104.8 341 32.6
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 9.8e-20 102.1 322 31.4
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 1.3e-19 101.7 342 31.9
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 3.7e-19 100.1 351 30.5
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 3.7e-19 100.1 264 36.0
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 1.1e-18 98.6 294 34.0
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 3.2e-18 97.1 306 31.7
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 3.2e-18 97.1 344 30.2
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 7.0e-18 95.9 162 37.7
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 1.2e-17 95.1 326 31.3
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 2.3e-16 90.9 295 32.9
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 5.0e-16 89.7 191 40.3
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 8.9e-13 79.0 289 32.5
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 1.9e-07 61.2 185 32.4


User provided reference genes

Program Settings