Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 8.3e-77 290.4 161 100.0
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 1.3e-34 150.2 139 58.3
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 8.7e-34 147.5 138 58.7
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 1.3e-32 143.7 138 58.0
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 2.2e-32 142.9 138 55.8
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 6.9e-31 137.9 139 54.0
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 1.2e-30 137.1 138 52.2
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 2.6e-30 136.0 138 51.4
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 2.6e-30 136.0 138 51.4
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 3.4e-30 135.6 137 49.6
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 4.5e-30 135.2 138 51.4
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 5.9e-30 134.8 138 52.2
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 7.6e-30 134.4 145 48.3
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 1.0e-29 134.0 138 50.0
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 1.0e-29 134.0 145 47.6
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 1.7e-29 133.3 140 48.6
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 2.2e-29 132.9 139 50.4
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 2.2e-29 132.9 138 51.4
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 2.9e-29 132.5 138 50.0
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 2.9e-29 132.5 138 50.7
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 3.8e-29 132.1 144 47.2
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 3.8e-29 132.1 138 49.3
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 5.0e-29 131.7 138 50.0
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 6.5e-29 131.3 138 50.0
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 1.4e-28 130.2 138 47.1
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 1.4e-28 130.2 138 49.3
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 1.4e-28 130.2 138 49.3
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 1.4e-28 130.2 138 49.3
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 1.4e-28 130.2 138 48.6
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 1.4e-28 130.2 145 46.9
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 1.9e-28 129.8 138 49.3
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 1.9e-28 129.8 138 50.7
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 2.5e-28 129.4 138 49.3
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 3.2e-28 129.0 136 48.5
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 4.2e-28 128.6 137 50.4
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 4.2e-28 128.6 144 46.5
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 4.2e-28 128.6 144 46.5
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 4.2e-28 128.6 138 48.6
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 4.2e-28 128.6 145 46.9
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 7.2e-28 127.9 139 49.6
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 9.3e-28 127.5 138 47.8
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 9.3e-28 127.5 145 46.2
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 9.3e-28 127.5 136 48.5
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 1.2e-27 127.1 139 46.0
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 1.6e-27 126.7 141 48.9
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 2.1e-27 126.3 138 47.1
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 2.7e-27 125.9 136 49.3
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 2.7e-27 125.9 138 48.6
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 3.6e-27 125.6 136 49.3
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 4.6e-27 125.2 141 48.9
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 4.6e-27 125.2 136 48.5
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 6.1e-27 124.8 136 48.5
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 6.1e-27 124.8 137 48.9
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 6.1e-27 124.8 137 48.9
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 7.9e-27 124.4 139 48.9
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 7.9e-27 124.4 141 47.5
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 7.9e-27 124.4 141 47.5
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 7.9e-27 124.4 136 48.5
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 7.9e-27 124.4 141 48.2
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 1.0e-26 124.0 141 48.2
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 1.0e-26 124.0 137 46.7
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 1.3e-26 123.6 141 47.5
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 1.3e-26 123.6 136 48.5
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 1.3e-26 123.6 138 47.8
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 1.8e-26 123.2 136 48.5
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 2.3e-26 122.9 141 47.5
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 3.0e-26 122.5 136 46.3
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 3.0e-26 122.5 137 46.7
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 3.9e-26 122.1 137 45.3
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 3.9e-26 122.1 141 47.5
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 3.9e-26 122.1 145 45.5
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 5.1e-26 121.7 136 47.8
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 8.8e-26 120.9 138 47.1
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 8.8e-26 120.9 138 47.1
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 8.8e-26 120.9 149 43.0
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 1.9e-25 119.8 138 44.9
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.9e-25 119.8 138 47.1
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.9e-25 119.8 138 46.4
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 2.5e-25 119.4 135 46.7
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 2.5e-25 119.4 153 43.8
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 3.3e-25 119.0 136 45.6
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 5.7e-25 118.2 138 45.7
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 5.7e-25 118.2 138 45.7
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 9.7e-25 117.5 139 46.8
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 1.3e-24 117.1 141 46.8
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 1.3e-24 117.1 120 52.5
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 4.8e-24 115.2 136 47.1
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 8.2e-24 114.4 136 42.6
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 8.2e-24 114.4 136 44.1
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 1.1e-23 114.0 136 46.3
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 2.4e-23 112.8 136 43.4
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 6.9e-23 111.3 138 46.4
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 6.9e-23 111.3 136 44.1
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 5.9e-22 108.2 138 42.8
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 8.5e-21 104.4 136 44.9
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 9.4e-20 100.9 136 41.2
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 9.4e-20 100.9 138 42.0
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 3.6e-19 99.0 86 62.8
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 7.9e-19 97.8 114 47.4
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 1.4e-18 97.1 105 49.5
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 8.8e-18 94.4 213 31.9
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 2.6e-17 92.8 113 43.4
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 4.4e-17 92.0 138 39.9
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 4.8e-16 88.6 103 46.6
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 4.8e-16 88.6 102 47.1
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 6.3e-16 88.2 104 47.1
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 6.3e-16 88.2 110 45.5
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 8.2e-16 87.8 138 36.2
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 1.4e-15 87.0 144 38.2
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 1.4e-15 87.0 136 39.0
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 3.1e-15 85.9 104 49.0
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 4.1e-15 85.5 101 46.5
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 4.5e-14 82.0 136 37.5
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 1.7e-13 80.1 77 54.5
Pp3c24_330 Physcomitrium patens HOM05D006161 ORTHO05D007483 5.0e-13 78.6 137 41.6
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 2.5e-12 76.3 103 42.7
arahy.Tifrunner.gnm1.ann1.HFW61Q Arachis hypogaea HOM05D006161 ORTHO05D007483 8.0e-11 71.2 67 53.7
CBR_g70737 Chara braunii HOM05D006161 ORTHO05D007483 2.6e-09 66.2 154 31.2
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 4.4e-09 65.5 136 30.9
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 2.8e-08 62.8 145 32.4
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 2.4e-07 59.7 77 40.3
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 7.0e-07 58.2 136 30.1
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 1.6e-06 57.0 70 38.6
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 1.6e-06 57.0 70 38.6


User provided reference genes

Program Settings