Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO116G0061 Selaginella moellendorffii HOM05D000096 ORTHO05D010168 7.2e-39 163.3 75 100.0
SMO269G0030 Selaginella moellendorffii HOM05D000096 ORTHO05D000045 6.1e-38 160.2 75 97.3
SMO146G0191 Selaginella moellendorffii HOM05D000096 ORTHO05D010168 3.5e-25 117.9 73 69.9
TPR.G24036 Trifolium pratense HOM05D000096 ORTHO05D009933 1.6e-09 65.9 73 41.1
TPR.G36056 Trifolium pratense HOM05D000096 ORTHO05D000045 1.0e-08 63.2 73 39.7
TPR.G5052 Trifolium pratense HOM05D000096 ORTHO05D000045 1.3e-08 62.8 73 38.4
TPR.G9555 Trifolium pratense HOM05D000096 ORTHO05D000045 1.3e-08 62.8 73 38.4
Zm00001eb009830 Zea mays HOM05D000096 ORTHO05D000045 1.7e-08 62.4 76 36.8
Zm00001eb399170 Zea mays HOM05D000096 ORTHO05D000045 1.7e-08 62.4 76 36.8
TPR.G40020 Trifolium pratense HOM05D000096 ORTHO05D000045 6.5e-08 60.5 73 37.0
TPR.G14233 Trifolium pratense HOM05D000096 ORTHO05D000045 1.1e-07 59.7 73 37.0
CANSAT01G2209 Cannabis sativa HOM05D000096 ORTHO05D000045 1.9e-07 58.9 71 40.8
CANSAT56G4396 Cannabis sativa HOM05D000096 ORTHO05D000045 1.9e-07 58.9 71 40.8
CANSAT80G1195 Cannabis sativa HOM05D000096 ORTHO05D000045 1.9e-07 58.9 71 40.8
PSO541G3480 Papaver somniferum HOM05D000096 ORTHO05D000045 1.9e-07 58.9 73 39.7
TPR.G9630 Trifolium pratense HOM05D000096 ORTHO05D000045 2.5e-07 58.5 73 37.0
ECA246G2596 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.2e-07 57.8 70 41.4
SGA_v2.0_scaffold257G45688 Striga asiatica HOM05D000011 ORTHO05D000018 7.2e-07 57.0 70 37.1
Oeu037932.1 Olea europaea HOM05D000096 ORTHO05D000045 1.2e-06 56.2 71 38.0
Os11g0671600 Oryza sativa ssp. japonica HOM05D000096 ORTHO05D000045 1.2e-06 56.2 73 38.4
TWI73G0764 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 1.2e-06 56.2 72 36.1
EL10Ac5g11698 Beta vulgaris HOM05D007854 ORTHO05D010168 1.6e-06 55.8 71 39.4
CANSAT64G0254 Cannabis sativa HOM05D000096 ORTHO05D000045 1.6e-06 55.8 67 40.3
CANSAT78G0229 Cannabis sativa HOM05D000096 ORTHO05D000045 1.6e-06 55.8 71 39.4
Cc01_g04040 Coffea canephora HOM05D000096 ORTHO05D000045 1.6e-06 55.8 76 38.2
EL10Ac6g15055 Beta vulgaris HOM05D000096 ORTHO05D000045 2.7e-06 55.1 70 35.7
Nn1g02481 Nelumbo nucifera HOM05D000096 ORTHO05D000045 2.7e-06 55.1 69 34.8
PGSC0003DMG400033370 Solanum tuberosum HOM05D000096 ORTHO05D000045 2.7e-06 55.1 70 37.1
Aqoxy4G02573 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 3.6e-06 54.7 74 36.5
EL10Ac1g01294 Beta vulgaris HOM05D000096 ORTHO05D000045 3.6e-06 54.7 74 37.8
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 3.6e-06 54.7 71 36.6
EL10Ac7g17443 Beta vulgaris HOM05D007854 ORTHO05D000045 4.7e-06 54.3 74 37.8
Ciclev10003309m.g Citrus clementina HOM05D000096 ORTHO05D000045 4.7e-06 54.3 75 30.7
COL.COLO4_31366 Corchorus olitorius HOM05D000096 ORTHO05D000045 4.7e-06 54.3 74 33.8
Lj5g0024288 Lotus japonicus HOM05D000096 ORTHO05D000045 4.7e-06 54.3 69 36.2
AUR62010678 Chenopodium quinoa HOM05D000096 ORTHO05D000045 6.1e-06 53.9 71 36.6
COL.COLO4_14940 Corchorus olitorius HOM05D000096 ORTHO05D000045 6.1e-06 53.9 72 38.9
COL.COLO4_16643 Corchorus olitorius HOM05D000096 ORTHO05D000045 6.1e-06 53.9 66 40.9
TWI31G0491 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 6.1e-06 53.9 73 41.1


User provided reference genes

Program Settings