Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO116G0055 Selaginella moellendorffii HOM05D004171 ORTHO05D004983 4.9e-134 481.1 235 100.0
Mapoly0102s0009 Marchantia polymorpha HOM05D004171 ORTHO05D004983 3.2e-85 318.9 237 62.0
Pp3c3_11900 Physcomitrium patens HOM05D004171 ORTHO05D004983 3.9e-67 258.8 236 50.0
CSS0009250 Camellia sinensis var. sinensis HOM05D004171 ORTHO05D004983 7.4e-66 254.6 235 50.2
Glyma.12G218800 Glycine max HOM05D004171 ORTHO05D004983 9.7e-66 254.2 235 49.8
Actinidia09971 Actinidia chinensis HOM05D004171 ORTHO05D004983 2.2e-65 253.1 235 51.5
Actinidia05147 Actinidia chinensis HOM05D004171 ORTHO05D004983 3.7e-65 252.3 235 49.8
Cpa.g.sc12.36 Carica papaya HOM05D004171 ORTHO05D004983 1.4e-64 250.4 235 48.9
PSO541G5656 Papaver somniferum HOM05D004171 ORTHO05D004983 1.8e-64 250.0 235 48.5
ATR0693G292 Amborella trichopoda HOM05D004171 ORTHO05D004983 2.4e-64 249.6 235 49.8
Aqoxy1G02716 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 5.3e-64 248.4 235 48.1
Hma1.2p1_1176F.1_g264170 Hydrangea macrophylla HOM05D004171 ORTHO05D004983 6.9e-64 248.1 235 50.2
Ah.04g165380 Amaranthus hybridus HOM05D004171 ORTHO05D004983 9.0e-64 247.7 235 47.7
SEGI_27365 Sequoiadendron giganteum HOM05D004171 ORTHO05D004983 1.2e-63 247.3 192 58.3
CiPaw.12G123300 Carya illinoinensis HOM05D004171 ORTHO05D004983 1.5e-63 246.9 235 49.8
PSO675G0635 Papaver somniferum HOM05D004171 ORTHO05D004983 1.5e-63 246.9 235 47.7
COL.COLO4_09488 Corchorus olitorius HOM05D004171 ORTHO05D004983 2.0e-63 246.5 235 48.1
Phvul.011G138400 Phaseolus vulgaris HOM05D004171 ORTHO05D004983 2.0e-63 246.5 235 48.5
Duzib268G0239 Durio zibethinus HOM05D004171 ORTHO05D004983 4.5e-63 245.4 235 48.1
Lj3g0003583 Lotus japonicus HOM05D004171 ORTHO05D004983 4.5e-63 245.4 235 48.5
Prupe.4G191500 Prunus persica HOM05D004171 ORTHO05D004983 4.5e-63 245.4 234 47.4
Rhsim06G0192400 Rhododendron simsii HOM05D004171 ORTHO05D004983 4.5e-63 245.4 235 48.9
RcHm_v2.0_Chr5g0036121 Rosa chinensis HOM05D004171 ORTHO05D004983 4.5e-63 245.4 236 49.2
arahy.Tifrunner.gnm1.ann1.H2QIWP Arachis hypogaea HOM05D004171 ORTHO05D004983 5.9e-63 245.0 235 47.2
arahy.Tifrunner.gnm1.ann1.UD3S3B Arachis hypogaea HOM05D004171 ORTHO05D004983 5.9e-63 245.0 235 47.2
TWI38G2120 Tripterygium wilfordii HOM05D004171 ORTHO05D004983 5.9e-63 245.0 235 47.7
VMungo1127G0586 Vigna mungo HOM05D004171 ORTHO05D004983 5.9e-63 245.0 235 49.4
MBI02_g13230_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 7.7e-63 244.6 235 48.5
Thecc.07G070400 Theobroma cacao HOM05D004171 ORTHO05D004983 7.7e-63 244.6 235 48.1
GSVIVG01014444001 Vitis vinifera HOM05D004171 ORTHO05D004983 1.3e-62 243.8 235 49.4
Cc05_g12750 Coffea canephora HOM05D004171 ORTHO05D004983 1.7e-62 243.4 235 48.5
Dinv22359 Davidia involucrata HOM05D004171 ORTHO05D004983 1.7e-62 243.4 235 48.9
Duzib213G0518 Durio zibethinus HOM05D004171 ORTHO05D004983 1.7e-62 243.4 235 47.2
vmacro11810 Vaccinium macrocarpon HOM05D004171 ORTHO05D004983 2.9e-62 242.7 233 47.6
HanXRQChr02g0031371 Helianthus annuus HOM05D004171 ORTHO05D004983 5.0e-62 241.9 235 48.1
Potri.011G126300 Populus trichocarpa HOM05D004171 ORTHO05D004983 5.0e-62 241.9 235 46.4
TPR.G25226 Trifolium pratense HOM05D004171 ORTHO05D004983 5.0e-62 241.9 235 47.2
Atru.chr2.2929 Acer truncatum HOM05D004171 ORTHO05D004983 6.5e-62 241.5 233 48.1
Glyma.12G134300 Glycine max HOM05D004171 ORTHO05D004983 6.5e-62 241.5 235 47.7
Manes.15G082500 Manihot esculenta HOM05D004171 ORTHO05D004983 6.5e-62 241.5 235 47.2
THA.LOC104799905 Tarenaya hassleriana HOM05D004171 ORTHO05D004983 6.5e-62 241.5 240 47.1
EL10Ac4g08047 Beta vulgaris HOM05D004171 ORTHO05D004983 8.5e-62 241.1 264 44.3
CiPaw.11G177500 Carya illinoinensis HOM05D004171 ORTHO05D004983 8.5e-62 241.1 235 48.9
ClCG11G018550 Citrullus lanatus HOM05D004171 ORTHO05D004983 8.5e-62 241.1 235 48.1
PGR083G0998 Punica granatum HOM05D004171 ORTHO05D004983 8.5e-62 241.1 235 48.9
Dinv08350 Davidia involucrata HOM05D004171 ORTHO05D004983 1.4e-61 240.4 235 47.7
MD03G1217700 Malus domestica HOM05D004171 ORTHO05D004983 1.4e-61 240.4 234 47.0
Sabra11G0111100 Salix brachista HOM05D004171 ORTHO05D004983 1.4e-61 240.4 235 46.0
FAN25G0362 Fragaria x ananassa HOM05D004171 ORTHO05D004983 1.9e-61 240.0 237 48.9
Lalb_Chr01g0017051 Lupinus albus HOM05D004171 ORTHO05D004983 1.9e-61 240.0 235 46.0
Hund23371 Selenicereus undatus HOM05D004171 ORTHO05D004983 1.9e-61 240.0 235 47.7
MBI18_g19831_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 2.5e-61 239.6 235 48.5
Medtr8g464760 Medicago truncatula HOM05D004171 ORTHO05D004983 2.5e-61 239.6 235 47.2
Cfa020499 Carpinus fangiana HOM05D004171 ORTHO05D004983 3.2e-61 239.2 235 47.7
MELO3C018184.2 Cucumis melo HOM05D004171 ORTHO05D004983 5.5e-61 238.4 235 47.2
FAN11G0158 Fragaria x ananassa HOM05D004171 ORTHO05D004983 5.5e-61 238.4 237 48.5
FAN16G3093 Fragaria x ananassa HOM05D004171 ORTHO05D004983 5.5e-61 238.4 237 48.5
VMungo1080G1500 Vigna mungo HOM05D004171 ORTHO05D004983 5.5e-61 238.4 235 48.1
AUR62015590 Chenopodium quinoa HOM05D004171 ORTHO05D004983 1.2e-60 237.3 235 46.8
TAR627G1073 Trochodendron aralioides HOM05D004171 ORTHO05D004983 2.1e-60 236.5 235 47.2
arahy.Tifrunner.gnm1.ann1.EUN1K4 Arachis hypogaea HOM05D004171 ORTHO05D004983 2.7e-60 236.1 235 46.0
arahy.Tifrunner.gnm1.ann1.SXKR4Z Arachis hypogaea HOM05D004171 ORTHO05D004983 2.7e-60 236.1 235 46.0
Duzib170G1088 Durio zibethinus HOM05D004171 ORTHO05D004983 2.7e-60 236.1 235 46.4
THA.LOC104813397 Tarenaya hassleriana HOM05D004171 ORTHO05D004983 2.7e-60 236.1 239 46.0
TWI39G0675 Tripterygium wilfordii HOM05D004171 ORTHO05D004983 2.7e-60 236.1 236 47.9
CSS0026220 Camellia sinensis var. sinensis HOM05D004171 ORTHO05D004983 3.6e-60 235.7 235 47.7
FvH4_3g21110 Fragaria vesca HOM05D004171 ORTHO05D004983 3.6e-60 235.7 237 48.1
BcaC04g20360 Brassica carinata HOM05D004171 ORTHO05D004983 4.6e-60 235.3 240 46.7
BolC9t57324H Brassica oleracea HOM05D004171 ORTHO05D004983 4.6e-60 235.3 240 46.7
MD11G1235500 Malus domestica HOM05D004171 ORTHO05D004983 4.6e-60 235.3 234 46.2
Gohir.D05G362300 Gossypium hirsutum HOM05D004171 ORTHO05D004983 6.1e-60 235.0 235 47.2
Gorai.009G430400 Gossypium raimondii HOM05D004171 ORTHO05D004983 6.1e-60 235.0 235 47.2
Migut.H01900 Erythranthe guttata HOM05D004171 ORTHO05D004983 7.9e-60 234.6 235 46.4
Gohir.A13G143300 Gossypium hirsutum HOM05D004171 ORTHO05D004983 7.9e-60 234.6 235 45.1
TAR629G3225 Trochodendron aralioides HOM05D004171 ORTHO05D004983 7.9e-60 234.6 235 47.2
C09p44520 Brassica napus HOM05D004171 ORTHO05D004983 1.0e-59 234.2 240 46.2
BraA10t43247Z Brassica rapa HOM05D004171 ORTHO05D004983 1.0e-59 234.2 240 46.2
CsaV3_3G044320 Cucumis sativus L. HOM05D004171 ORTHO05D004983 1.4e-59 233.8 235 46.4
Gohir.A04G025600 Gossypium hirsutum HOM05D004171 ORTHO05D004983 1.4e-59 233.8 235 47.2
Gohir.D13G148000 Gossypium hirsutum HOM05D004171 ORTHO05D004983 1.4e-59 233.8 235 44.7
Gorai.013G165800 Gossypium raimondii HOM05D004171 ORTHO05D004983 1.4e-59 233.8 235 44.7
Psat4g140880 Pisum sativum HOM05D004171 ORTHO05D004983 1.4e-59 233.8 235 45.5
SalBow7G4117 Salvia bowleyana HOM05D004171 ORTHO05D004983 1.4e-59 233.8 235 46.8
Haze_09543 Corylus avellana HOM05D004171 ORTHO05D004983 1.8e-59 233.4 235 46.8
Nitab4.5_0009110g0010 Nicotiana tabacum HOM05D004171 ORTHO05D004983 1.8e-59 233.4 235 45.5
BcaB08g35778 Brassica carinata HOM05D004171 ORTHO05D004983 3.0e-59 232.6 240 46.2
AUR62029303 Chenopodium quinoa HOM05D004171 ORTHO05D004983 3.9e-59 232.3 235 46.0
QL08p017518 Quercus lobata HOM05D004171 ORTHO05D004983 5.1e-59 231.9 235 46.4
Nitab4.5_0000297g0160 Nicotiana tabacum HOM05D004171 ORTHO05D004983 6.7e-59 231.5 235 45.1
A10p11530 Brassica napus HOM05D004171 ORTHO05D004983 8.8e-59 231.1 240 45.8
CARHR267500 Cardamine hirsuta HOM05D004171 ORTHO05D004983 8.8e-59 231.1 241 45.2
Manes.03G117000 Manihot esculenta HOM05D004171 ORTHO05D004983 8.8e-59 231.1 235 45.1
Thhalv10014333m.g Eutrema salsugineum HOM05D004171 ORTHO05D004983 1.5e-58 230.3 240 45.0
MBI18_g27681_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 1.5e-58 230.3 254 45.3
AL8G29560 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 2.0e-58 229.9 241 44.8
Thhalv10025946m.g Eutrema salsugineum HOM05D004171 ORTHO05D004983 2.0e-58 229.9 240 45.8
Lj1A854T34 Lonicera japonica HOM05D004171 ORTHO05D004983 2.0e-58 229.9 235 47.7
Eucgr.F01074 Eucalyptus grandis HOM05D004171 ORTHO05D004983 2.5e-58 229.6 235 47.7
Sp6g16280 Schrenkiella parvula HOM05D004171 ORTHO05D004983 2.5e-58 229.6 240 45.4
MSTRG.12927 Avicennia marina HOM05D004171 ORTHO05D004983 3.3e-58 229.2 235 46.0
BcaNung05200 Brassica carinata HOM05D004171 ORTHO05D004983 3.3e-58 229.2 242 46.3
Peaxi162Scf01216g00047 Petunia axillaris HOM05D004171 ORTHO05D004983 4.3e-58 228.8 235 44.7
BcaB05g22115 Brassica carinata HOM05D004171 ORTHO05D004983 5.7e-58 228.4 240 44.2
BcaC09g50581 Brassica carinata HOM05D004171 ORTHO05D004983 5.7e-58 228.4 242 45.9
A01p18530 Brassica napus HOM05D004171 ORTHO05D004983 5.7e-58 228.4 243 46.1
BolC1t02294H Brassica oleracea HOM05D004171 ORTHO05D004983 5.7e-58 228.4 242 45.9
BraA01t01802Z Brassica rapa HOM05D004171 ORTHO05D004983 5.7e-58 228.4 243 46.1
BraA02t06113Z Brassica rapa HOM05D004171 ORTHO05D004983 5.7e-58 228.4 240 44.2
Aa31LG3G10200 Aethionema arabicum HOM05D004171 ORTHO05D004983 7.4e-58 228.0 240 44.2
AT5G54240 Arabidopsis thaliana HOM05D004171 ORTHO05D004983 7.4e-58 228.0 241 44.0
CARHR235000 Cardamine hirsuta HOM05D004171 ORTHO05D004983 7.4e-58 228.0 241 44.4
PGR031G0147 Punica granatum HOM05D004171 ORTHO05D004983 7.4e-58 228.0 235 46.4
Sed0025378 Sechium edule HOM05D004171 ORTHO05D004983 7.4e-58 228.0 235 46.4
Sc16g0006730 Simmondsia chinensis HOM05D004171 ORTHO05D004983 7.4e-58 228.0 233 47.6
BcaNung03036 Brassica carinata HOM05D004171 ORTHO05D004983 9.7e-58 227.6 243 45.3
BcaNung05201 Brassica carinata HOM05D004171 ORTHO05D004983 9.7e-58 227.6 243 45.3
A02p10500 Brassica napus HOM05D004171 ORTHO05D004983 1.7e-57 226.9 240 43.8
C01p23480 Brassica napus HOM05D004171 ORTHO05D004983 1.7e-57 226.9 242 45.0
Sp7g25280 Schrenkiella parvula HOM05D004171 ORTHO05D004983 1.7e-57 226.9 241 45.2
AL7G25450 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 2.2e-57 226.5 241 44.8
MSTRG.14383 Avicennia marina HOM05D004171 ORTHO05D004983 2.2e-57 226.5 235 45.1
PGSC0003DMG400019283 Solanum tuberosum HOM05D004171 ORTHO05D004983 2.2e-57 226.5 235 43.8
AT4G27350 Arabidopsis thaliana HOM05D004171 ORTHO05D004983 3.7e-57 225.7 241 44.4
HPP92_012360 Vanilla planifolia HOM05D004171 ORTHO05D004983 4.8e-57 225.3 235 46.8
Carub.0007s1352 Capsella rubella HOM05D004171 ORTHO05D004983 6.3e-57 224.9 242 45.5
ECA236G3492 Erigeron canadensis HOM05D004171 ORTHO05D004983 8.2e-57 224.6 235 43.4
FAN21G0927 Fragaria x ananassa HOM05D004171 ORTHO05D004983 1.1e-56 224.2 238 47.5
Solyc07g063620.3 Solanum lycopersicum HOM05D004171 ORTHO05D004983 1.4e-56 223.8 235 43.4
Sopen07g031800 Solanum pennellii HOM05D004171 ORTHO05D004983 1.4e-56 223.8 235 43.4
SGA_v2.0_scaffold9G04958 Striga asiatica HOM05D004171 ORTHO05D004983 1.4e-56 223.8 235 44.7
Eucgr.F03360 Eucalyptus grandis HOM05D004171 ORTHO05D004983 1.8e-56 223.4 236 46.2
Lsat_1_v5_gn_7_105981 Lactuca sativa HOM05D004171 ORTHO05D004983 1.8e-56 223.4 235 43.4
CAN.G162.108 Capsicum annuum HOM05D004171 ORTHO05D004983 2.4e-56 223.0 235 44.3
CDE02G1151 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 2.4e-56 223.0 235 47.2
Ciclev10009152m.g Citrus clementina HOM05D004171 ORTHO05D004983 2.4e-56 223.0 237 45.1
Aa31LG5G10160 Aethionema arabicum HOM05D002586 ORTHO05D007009 4.1e-56 222.2 228 46.9
Oeu006766.1 Olea europaea HOM05D004171 ORTHO05D004983 4.1e-56 222.2 235 44.3
Carub.0008s1458 Capsella rubella HOM05D004171 ORTHO05D004983 1.5e-55 220.3 231 45.5
Sed0003677 Sechium edule HOM05D004171 ORTHO05D004983 1.5e-55 220.3 235 44.3
BcaC09g50583 Brassica carinata HOM05D002586 ORTHO05D007009 2.6e-55 219.5 226 47.3
CANSAT11G0840 Cannabis sativa HOM05D004171 ORTHO05D004983 2.6e-55 219.5 235 45.1
Lalb_Chr19g0134521 Lupinus albus HOM05D004171 ORTHO05D004983 5.9e-55 218.4 233 44.6
Gohir.A08G020900 Gossypium hirsutum HOM05D004171 ORTHO05D004983 7.7e-55 218.0 235 47.2
Gorai.004G029100 Gossypium raimondii HOM05D004171 ORTHO05D004983 7.7e-55 218.0 235 47.2
DCAR_008697 Daucus carota HOM05D004171 ORTHO05D004983 2.9e-54 216.1 235 44.7
DCAR_009989 Daucus carota HOM05D004171 ORTHO05D004983 1.2e-52 210.7 235 42.6
Os07g0559400 Oryza sativa ssp. japonica HOM05D004171 ORTHO05D004983 6.1e-52 208.4 242 41.7
Zm00001eb324170 Zea mays HOM05D004171 ORTHO05D004983 2.3e-51 206.5 236 43.6
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 3.9e-51 205.7 228 43.4
unitig_699.g19211 Utricularia gibba HOM05D004171 ORTHO05D004983 2.6e-50 203.0 235 40.9
AagrBONN_evm.TU.Sc2ySwM_228.913 Anthoceros agrestis HOM05D004171 ORTHO05D004983 9.7e-50 201.1 204 50.0
CDE01G0586 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 2.4e-48 196.4 202 46.0
CBR_g24077 Chara braunii HOM05D004171 ORTHO05D004983 7.2e-45 184.9 230 39.6
Potri.001G408001 Populus trichocarpa HOM05D004171 ORTHO05D004983 2.6e-42 176.4 182 42.9
CAN.G847.1 Capsicum annuum HOM05D004171 ORTHO05D004983 3.1e-40 169.5 198 40.4
CAN.G187.6 Capsicum annuum HOM05D004171 ORTHO05D004983 2.4e-32 143.3 186 38.7
Ca_22993_v3 Cicer arietinum L. HOM05D004171 ORTHO05D004983 1.0e-30 137.9 118 50.8
Oeu019367.1 Olea europaea HOM05D004171 ORTHO05D004983 1.3e-30 137.5 117 51.3
Nn1g06780 Nelumbo nucifera HOM05D004171 ORTHO05D004983 1.7e-30 137.1 117 52.1
Nn1g03875 Nelumbo nucifera HOM05D004171 ORTHO05D004983 3.8e-30 136.0 146 44.5
CDE12G0832 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 5.5e-29 132.1 204 35.3
CBR_g54085 Chara braunii HOM05D000019 ORTHO05D000002 2.0e-26 123.6 118 46.6
Gohir.D08G031500 Gossypium hirsutum HOM05D004171 ORTHO05D004983 1.7e-25 120.6 135 45.2
C02p17300 Brassica napus HOM05D004171 ORTHO05D004983 4.3e-21 105.9 102 46.1
BolC2t07830H Brassica oleracea HOM05D004171 ORTHO05D004983 4.3e-21 105.9 102 46.1
BolC2t07836H Brassica oleracea HOM05D004171 ORTHO05D004983 4.3e-21 105.9 102 46.1
BcaNung05202 Brassica carinata HOM05D004171 ORTHO05D004983 8.9e-11 71.6 72 44.4
AL9U10820 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 3.9e-06 56.2 74 36.5


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