Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO115G0274 Selaginella moellendorffii HOM05D007597 ORTHO05D009608 1.3e-49 199.5 104 100.0
AagrBONN_evm.TU.Sc2ySwM_228.3100 Anthoceros agrestis HOM05D007597 ORTHO05D009608 1.0e-11 73.6 92 42.4
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 2.3e-11 72.4 89 44.9
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 2.3e-11 72.4 89 47.2
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 5.1e-11 71.2 89 43.8
ATR0118G012 Amborella trichopoda HOM05D007597 ORTHO05D009608 1.1e-10 70.1 89 43.8
CBR_g61471 Chara braunii HOM05D007597 ORTHO05D009608 1.5e-10 69.7 97 42.3
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 3.3e-10 68.6 89 44.9
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 5.7e-10 67.8 89 44.9
CSS0009732 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 7.4e-10 67.4 84 46.4
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 9.7e-10 67.0 89 44.9
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 9.7e-10 67.0 89 43.8
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 9.7e-10 67.0 90 45.6
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 1.3e-09 66.6 89 43.8
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 1.7e-09 66.2 89 41.6
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 1.7e-09 66.2 89 41.6
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 1.7e-09 66.2 89 41.6
Os03g0713200 Oryza sativa ssp. japonica HOM05D007597 ORTHO05D009608 1.7e-09 66.2 89 44.9
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.2e-09 65.9 89 43.8
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 2.8e-09 65.5 89 42.7
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 2.8e-09 65.5 89 41.6
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 2.8e-09 65.5 89 40.4
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 3.7e-09 65.1 89 44.9
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 3.7e-09 65.1 89 42.7
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 3.7e-09 65.1 89 42.7
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 3.7e-09 65.1 92 40.2
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 3.7e-09 65.1 84 44.0
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 4.8e-09 64.7 89 40.4
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 4.8e-09 64.7 89 42.7
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 1.1e-08 63.5 84 44.0
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 1.1e-08 63.5 89 40.4
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 1.1e-08 63.5 89 40.4
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 1.1e-08 63.5 89 42.7
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 1.8e-08 62.8 89 39.3
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 2.4e-08 62.4 89 39.3
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 2.4e-08 62.4 89 42.7
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 2.4e-08 62.4 89 42.7
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 3.1e-08 62.0 89 42.7
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 3.1e-08 62.0 89 41.6
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 3.1e-08 62.0 89 41.6
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 4.1e-08 61.6 89 40.4
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 4.1e-08 61.6 83 42.2
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 5.3e-08 61.2 84 41.7
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 5.3e-08 61.2 96 40.6
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 5.3e-08 61.2 89 37.1
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 6.9e-08 60.8 89 41.6
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 1.2e-07 60.1 84 39.3
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 1.2e-07 60.1 89 42.7
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 1.5e-07 59.7 92 40.2
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 1.5e-07 59.7 84 42.9
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 1.5e-07 59.7 89 41.6
Lj6P736T27 Lonicera japonica HOM05D007597 ORTHO05D009608 1.5e-07 59.7 84 39.3
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 2.0e-07 59.3 91 40.7
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 2.0e-07 59.3 89 40.4
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 4.5e-07 58.2 90 42.2
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 5.9e-07 57.8 89 41.6
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 5.9e-07 57.8 89 41.6
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 7.7e-07 57.4 82 43.9
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 7.7e-07 57.4 89 37.1
Migut.E00488 Erythranthe guttata HOM05D007597 ORTHO05D009608 1.0e-06 57.0 89 40.4
Oeu031613.1 Olea europaea HOM05D007597 ORTHO05D009608 1.0e-06 57.0 84 40.5
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 1.0e-06 57.0 89 38.2
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 1.3e-06 56.6 95 35.8
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 1.3e-06 56.6 84 40.5
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 1.7e-06 56.2 93 39.8
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 1.7e-06 56.2 89 40.4
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 1.7e-06 56.2 89 40.4
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 1.7e-06 56.2 89 37.1
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 2.2e-06 55.8 89 41.6
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 2.2e-06 55.8 89 41.6
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 2.2e-06 55.8 94 36.2
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 2.9e-06 55.5 89 39.3
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 2.9e-06 55.5 91 36.3
Carub.0005s0071 Capsella rubella HOM05D007597 ORTHO05D009608 2.9e-06 55.5 84 41.7
Pp3c16_25200 Physcomitrium patens HOM05D007597 ORTHO05D009608 3.8e-06 55.1 91 35.2
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 3.8e-06 55.1 89 40.4
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 5.0e-06 54.7 90 41.1
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 6.5e-06 54.3 89 40.4
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 6.5e-06 54.3 89 40.4
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 6.5e-06 54.3 89 40.4
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 8.5e-06 53.9 89 41.6


User provided reference genes

Program Settings