Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO115G0239 Selaginella moellendorffii HOM05D004029 ORTHO05D004613 2.3e-151 538.9 270 100.0
Mapoly0031s0138 Marchantia polymorpha HOM05D004029 ORTHO05D004613 5.1e-103 378.3 262 70.2
Nn1g03970 Nelumbo nucifera HOM05D004029 ORTHO05D004613 1.0e-90 337.4 256 64.8
Pp3c26_12060 Physcomitrium patens HOM05D004029 ORTHO05D004613 1.0e-90 337.4 260 62.7
GSVIVG01014409001 Vitis vinifera HOM05D004029 ORTHO05D004613 2.9e-90 335.9 255 64.7
SEGI_15865 Sequoiadendron giganteum HOM05D004029 ORTHO05D004613 7.1e-89 331.3 256 65.2
Atru.chr2.2811 Acer truncatum HOM05D004029 ORTHO05D004613 1.2e-88 330.5 256 63.7
Potri.011G123900 Populus trichocarpa HOM05D004029 ORTHO05D004613 3.5e-88 328.9 256 61.7
TAR627G0860 Trochodendron aralioides HOM05D004029 ORTHO05D004613 6.1e-88 328.2 256 63.7
ATR0064G128 Amborella trichopoda HOM05D004029 ORTHO05D004613 7.9e-88 327.8 260 63.5
Eucgr.F03341 Eucalyptus grandis HOM05D004029 ORTHO05D004613 1.3e-87 327.0 260 62.3
Sabra11G0109200 Salix brachista HOM05D004029 ORTHO05D004613 3.0e-87 325.9 256 61.7
CANSAT11G2434 Cannabis sativa HOM05D004029 ORTHO05D004613 3.9e-87 325.5 261 62.5
Aqoxy7G04099 Aquilegia oxysepala HOM05D004029 ORTHO05D004613 5.1e-87 325.1 256 63.3
CDE05G1182 Ceratophyllum demersum HOM05D004029 ORTHO05D004613 5.1e-87 325.1 255 63.1
Phvul.005G085200 Phaseolus vulgaris HOM05D004029 ORTHO05D004613 5.1e-87 325.1 256 62.1
PGR031G0420 Punica granatum HOM05D004029 ORTHO05D004613 5.1e-87 325.1 256 62.9
Rhsim06G0193700 Rhododendron simsii HOM05D004029 ORTHO05D004613 8.7e-87 324.3 256 63.3
Manes.03G114700 Manihot esculenta HOM05D004029 ORTHO05D004613 1.5e-86 323.6 256 62.9
Oeu008022.1 Olea europaea HOM05D004029 ORTHO05D004613 1.5e-86 323.6 255 62.7
Peaxi162Scf01111g00112 Petunia axillaris HOM05D004029 ORTHO05D004613 1.5e-86 323.6 256 62.1
ClCG11G018320 Citrullus lanatus HOM05D004029 ORTHO05D004613 1.9e-86 323.2 255 62.4
COL.COLO4_03559 Corchorus olitorius HOM05D004029 ORTHO05D004613 1.9e-86 323.2 261 61.7
Lj1C850G7 Lonicera japonica HOM05D004029 ORTHO05D004613 1.9e-86 323.2 256 62.1
Actinidia05171 Actinidia chinensis HOM05D004029 ORTHO05D004613 2.5e-86 322.8 256 63.3
arahy.Tifrunner.gnm1.ann1.IWX37I Arachis hypogaea HOM05D004029 ORTHO05D004613 2.5e-86 322.8 255 63.5
MELO3C018224.2 Cucumis melo HOM05D004029 ORTHO05D004613 2.5e-86 322.8 256 62.1
CsaV3_3G044490 Cucumis sativus L. HOM05D004029 ORTHO05D004613 2.5e-86 322.8 256 62.1
Glyma.12G220900 Glycine max HOM05D004029 ORTHO05D004613 5.7e-86 321.6 256 62.1
Glyma.13G280700 Glycine max HOM05D004029 ORTHO05D004613 5.7e-86 321.6 256 61.7
PSO541G4143 Papaver somniferum HOM05D004029 ORTHO05D004613 5.7e-86 321.6 261 59.8
Prupe.4G187500 Prunus persica HOM05D004029 ORTHO05D004613 5.7e-86 321.6 256 62.9
arahy.Tifrunner.gnm1.ann1.3J4V9H Arachis hypogaea HOM05D004029 ORTHO05D004613 7.4e-86 321.2 255 63.1
CSS0001233 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 7.4e-86 321.2 256 62.5
CSS0038840 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 7.4e-86 321.2 256 62.5
PSO675G2841 Papaver somniferum HOM05D004029 ORTHO05D004613 7.4e-86 321.2 261 59.8
Sed0019496 Sechium edule HOM05D004029 ORTHO05D004613 7.4e-86 321.2 255 62.0
Haze_09504 Corylus avellana HOM05D004029 ORTHO05D004613 1.3e-85 320.5 256 62.5
Sc03g0009690 Simmondsia chinensis HOM05D004029 ORTHO05D004613 1.3e-85 320.5 261 60.2
TWI38G0763 Tripterygium wilfordii HOM05D004029 ORTHO05D004613 1.3e-85 320.5 256 61.3
Duzib213G0443 Durio zibethinus HOM05D004029 ORTHO05D004613 1.6e-85 320.1 256 62.1
Duzib268G1628 Durio zibethinus HOM05D004029 ORTHO05D004613 1.6e-85 320.1 261 60.9
AagrBONN_evm.TU.Sc2ySwM_344.2130 Anthoceros agrestis HOM05D004029 ORTHO05D004613 2.2e-85 319.7 259 62.5
Nitab4.5_0000815g0060 Nicotiana tabacum HOM05D004029 ORTHO05D004613 2.8e-85 319.3 256 61.3
Thecc.07G074600 Theobroma cacao HOM05D004029 ORTHO05D004613 3.7e-85 318.9 255 62.4
RcHm_v2.0_Chr5g0034971 Rosa chinensis HOM05D004029 ORTHO05D004613 4.8e-85 318.5 255 62.4
Gohir.D01G054200 Gossypium hirsutum HOM05D004029 ORTHO05D004613 6.3e-85 318.2 260 61.5
QL08p019114 Quercus lobata HOM05D004029 ORTHO05D004613 8.2e-85 317.8 256 62.1
THA.LOC104811852 Tarenaya hassleriana HOM05D004029 ORTHO05D004613 8.2e-85 317.8 260 60.4
Lalb_Chr25g0286611 Lupinus albus HOM05D004029 ORTHO05D004613 1.1e-84 317.4 255 61.6
MD11G1239600 Malus domestica HOM05D004029 ORTHO05D004613 1.1e-84 317.4 256 61.3
Ciclev10007273m.g Citrus clementina HOM05D004029 ORTHO05D004613 1.8e-84 316.6 256 60.2
Lj3g0020332 Lotus japonicus HOM05D004029 ORTHO05D004613 1.8e-84 316.6 256 62.1
VMungo1080G0798 Vigna mungo HOM05D004029 ORTHO05D004613 1.8e-84 316.6 256 60.2
MSTRG.12924 Avicennia marina HOM05D004029 ORTHO05D004613 2.4e-84 316.2 255 61.6
CAN.G162.91 Capsicum annuum HOM05D004029 ORTHO05D004613 2.4e-84 316.2 256 61.3
Nitab4.5_0001204g0130 Nicotiana tabacum HOM05D004029 ORTHO05D004613 2.4e-84 316.2 256 60.9
Gohir.A01G067000 Gossypium hirsutum HOM05D004029 ORTHO05D004613 3.1e-84 315.8 260 61.2
Solyc07g063440.3 Solanum lycopersicum HOM05D004029 ORTHO05D004613 3.1e-84 315.8 256 60.9
Sopen07g031610 Solanum pennellii HOM05D004029 ORTHO05D004613 3.1e-84 315.8 256 60.9
Gorai.002G074000 Gossypium raimondii HOM05D004029 ORTHO05D004613 5.3e-84 315.1 260 61.2
Cfa020529 Carpinus fangiana HOM05D004029 ORTHO05D004613 6.9e-84 314.7 256 60.9
FAN21G1497 Fragaria x ananassa HOM05D004029 ORTHO05D004613 1.2e-83 313.9 256 61.3
FAN25G1694 Fragaria x ananassa HOM05D004029 ORTHO05D004613 1.2e-83 313.9 256 61.3
Ca_01815_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 2.6e-83 312.8 255 61.2
Ca_30535_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 2.6e-83 312.8 255 61.2
MD03G1222200 Malus domestica HOM05D004029 ORTHO05D004613 2.6e-83 312.8 256 61.3
Lalb_Chr01g0016971 Lupinus albus HOM05D004029 ORTHO05D004613 3.4e-83 312.4 255 60.8
BcaB08g35795 Brassica carinata HOM05D004029 ORTHO05D004613 7.7e-83 311.2 260 59.2
CBR_g48014 Chara braunii HOM05D004029 ORTHO05D004613 7.7e-83 311.2 260 59.2
A10p11660 Brassica napus HOM05D004029 ORTHO05D004613 1.0e-82 310.8 260 59.2
BraA10t43261Z Brassica rapa HOM05D004029 ORTHO05D004613 1.0e-82 310.8 260 59.2
FAN11G1114 Fragaria x ananassa HOM05D004029 ORTHO05D004613 1.0e-82 310.8 256 60.9
FAN16G1973 Fragaria x ananassa HOM05D004029 ORTHO05D004613 1.0e-82 310.8 256 60.9
CiPaw.11G174500 Carya illinoinensis HOM05D004029 ORTHO05D004613 1.3e-82 310.5 256 61.3
vmacro11822 Vaccinium macrocarpon HOM05D004029 ORTHO05D004613 1.3e-82 310.5 261 60.2
BcaB05g22133 Brassica carinata HOM05D004029 ORTHO05D004613 2.2e-82 309.7 260 60.0
AL8G29790 Arabidopsis lyrata HOM05D004029 ORTHO05D004613 2.9e-82 309.3 260 59.2
BolC2t07800H Brassica oleracea HOM05D004029 ORTHO05D004613 2.9e-82 309.3 260 59.6
Lsat_1_v5_gn_7_105721 Lactuca sativa HOM05D004029 ORTHO05D004613 2.9e-82 309.3 255 60.0
BcaC04g20340 Brassica carinata HOM05D004029 ORTHO05D004613 3.8e-82 308.9 260 59.2
C09p44730 Brassica napus HOM05D004029 ORTHO05D004613 3.8e-82 308.9 260 59.2
BolC9t57346H Brassica oleracea HOM05D004029 ORTHO05D004613 3.8e-82 308.9 260 59.2
FvH4_3g20750 Fragaria vesca HOM05D004029 ORTHO05D004613 3.8e-82 308.9 256 60.5
AT5G54440 Arabidopsis thaliana HOM05D004029 ORTHO05D004613 6.5e-82 308.1 260 58.8
Carub.0008s1474 Capsella rubella HOM05D004029 ORTHO05D004613 6.5e-82 308.1 260 58.8
Psat5g246120 Pisum sativum HOM05D004029 ORTHO05D004613 6.5e-82 308.1 255 60.4
BcaC03g14313 Brassica carinata HOM05D004029 ORTHO05D004613 8.5e-82 307.8 260 59.2
A02p10290 Brassica napus HOM05D004029 ORTHO05D004613 8.5e-82 307.8 260 59.2
C02p17030 Brassica napus HOM05D004029 ORTHO05D004613 8.5e-82 307.8 260 59.2
BraA02t06097Z Brassica rapa HOM05D004029 ORTHO05D004613 8.5e-82 307.8 260 59.2
Gohir.A11G282734 Gossypium hirsutum HOM05D004029 ORTHO05D004613 1.4e-81 307.0 256 59.8
Medtr2g080050 Medicago truncatula HOM05D004029 ORTHO05D004613 1.4e-81 307.0 255 61.2
ECA236G3046 Erigeron canadensis HOM05D004029 ORTHO05D004613 1.9e-81 306.6 255 60.0
Thhalv10012467m.g Eutrema salsugineum HOM05D004029 ORTHO05D004613 1.9e-81 306.6 260 58.5
Aa31LG3G10350 Aethionema arabicum HOM05D004029 ORTHO05D004613 2.5e-81 306.2 260 58.5
SGA_v2.0_scaffold77G25216 Striga asiatica HOM05D004029 ORTHO05D004613 5.5e-81 305.1 255 60.4
DCAR_013079 Daucus carota HOM05D004029 ORTHO05D004613 7.2e-81 304.7 255 58.8
Migut.H01912 Erythranthe guttata HOM05D004029 ORTHO05D004613 9.4e-81 304.3 255 60.4
CARHR267710 Cardamine hirsuta HOM05D004029 ORTHO05D004613 2.7e-80 302.8 260 57.7
Sp6g16420 Schrenkiella parvula HOM05D004029 ORTHO05D004613 3.6e-80 302.4 260 58.1
Hund02202 Selenicereus undatus HOM05D004029 ORTHO05D004613 3.6e-80 302.4 260 58.5
Gohir.D11G296200 Gossypium hirsutum HOM05D004029 ORTHO05D004613 4.6e-80 302.0 256 59.0
Gorai.007G319300 Gossypium raimondii HOM05D004029 ORTHO05D004613 4.6e-80 302.0 256 59.0
Lsat_1_v5_gn_9_95861 Lactuca sativa HOM05D004029 ORTHO05D004613 4.6e-80 302.0 261 57.9
Ah.06g183680 Amaranthus hybridus HOM05D004029 ORTHO05D004613 6.1e-80 301.6 261 57.1
HanXRQChr10g0289491 Helianthus annuus HOM05D004029 ORTHO05D004613 7.9e-80 301.2 255 59.2
ECA240G1154 Erigeron canadensis HOM05D004029 ORTHO05D004613 3.0e-79 299.3 261 58.6
AUR62015624 Chenopodium quinoa HOM05D004029 ORTHO05D004613 5.7e-78 295.0 261 56.3
AUR62029337 Chenopodium quinoa HOM05D004029 ORTHO05D004613 5.7e-78 295.0 261 56.3
Os12g0554400 Oryza sativa ssp. japonica HOM05D004029 ORTHO05D004613 1.3e-77 293.9 255 59.2
EL10Ac4g08092 Beta vulgaris HOM05D004029 ORTHO05D004613 2.9e-74 282.7 255 56.1
HanXRQChr13g0386411 Helianthus annuus HOM05D004029 ORTHO05D004613 1.6e-72 276.9 257 55.6
Dinv08327 Davidia involucrata HOM05D004029 ORTHO05D004613 7.2e-57 224.9 212 56.1
unitig_0.g2259 Utricularia gibba HOM05D004029 ORTHO05D004613 3.0e-55 219.5 192 57.8
Zm00001eb137170 Zea mays HOM05D004029 ORTHO05D004613 7.5e-54 214.9 179 61.5
ATR0693G140 Amborella trichopoda HOM05D004029 ORTHO05D004613 2.7e-35 153.3 135 56.3
Psat1g176800 Pisum sativum HOM05D004029 ORTHO05D004613 1.9e-33 147.1 140 52.1
Psat1g176880 Pisum sativum HOM05D004029 ORTHO05D004613 9.5e-33 144.8 140 52.1
HPP92_020357 Vanilla planifolia HOM05D004029 ORTHO05D004613 5.2e-31 139.0 125 57.6
ATR0693G350 Amborella trichopoda HOM05D004029 ORTHO05D004613 3.9e-18 96.3 74 64.9
Gohir.1Z049574 Gossypium hirsutum HOM05D004029 ORTHO05D004613 1.3e-13 81.3 85 48.2
Psat4g074000 Pisum sativum HOM05D004029 ORTHO05D004613 7.3e-09 65.5 48 64.6


User provided reference genes

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