Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO115G0217 Selaginella moellendorffii HOM05D004613 ORTHO05D006095 6.9e-150 533.9 258 100.0
Pp3c24_5170 Physcomitrium patens HOM05D004613 ORTHO05D006095 3.3e-67 259.2 206 55.3
Mapoly0007s0105 Marchantia polymorpha HOM05D004613 ORTHO05D006095 1.4e-65 253.8 233 52.8
Phvul.007G182600 Phaseolus vulgaris HOM05D004613 ORTHO05D006095 2.0e-56 223.4 232 48.7
CBR_g37761 Chara braunii HOM05D004613 ORTHO05D006095 6.5e-55 218.4 213 49.8
RcHm_v2.0_Chr3g0454031 Rosa chinensis HOM05D004613 ORTHO05D006095 1.1e-54 217.6 231 48.5
FvH4_6g05290 Fragaria vesca HOM05D004613 ORTHO05D006095 2.5e-54 216.5 248 46.0
FAN14G3061 Fragaria x ananassa HOM05D004613 ORTHO05D006095 4.6e-53 212.2 248 46.0
Sc09g0003370 Simmondsia chinensis HOM05D004613 ORTHO05D006095 4.6e-53 212.2 236 46.2
TPR.G2750 Trifolium pratense HOM05D004613 ORTHO05D006095 7.9e-53 211.5 212 50.0
VMungo0720G0951 Vigna mungo HOM05D004613 ORTHO05D006095 1.0e-52 211.1 198 52.5
MD12G1224400 Malus domestica HOM05D004613 ORTHO05D006095 1.8e-52 210.3 210 49.5
Lj5g0014952 Lotus japonicus HOM05D004613 ORTHO05D006095 2.3e-52 209.9 233 45.1
FAN05G3359 Fragaria x ananassa HOM05D004613 ORTHO05D006095 5.1e-52 208.8 248 46.0
Sed0016876 Sechium edule HOM05D004613 ORTHO05D006095 5.1e-52 208.8 197 51.3
Ciclev10001987m.g Citrus clementina HOM05D004613 ORTHO05D006095 6.7e-52 208.4 212 50.5
FAN09G4458 Fragaria x ananassa HOM05D004613 ORTHO05D006095 6.7e-52 208.4 200 52.0
arahy.Tifrunner.gnm1.ann1.R33V11 Arachis hypogaea HOM05D004613 ORTHO05D006095 1.1e-51 207.6 207 48.8
Thecc.05G300000 Theobroma cacao HOM05D004613 ORTHO05D006095 2.5e-51 206.5 209 48.3
Eucgr.B02002 Eucalyptus grandis HOM05D004613 ORTHO05D006095 3.3e-51 206.1 197 50.8
FAN05G4103 Fragaria x ananassa HOM05D004613 ORTHO05D006095 3.3e-51 206.1 262 43.5
CsaV3_1G039190 Cucumis sativus L. HOM05D004613 ORTHO05D006095 4.3e-51 205.7 205 48.8
Aqoxy2G03209 Aquilegia oxysepala HOM05D004613 ORTHO05D006095 5.7e-51 205.3 207 48.3
MSTRG.20469 Avicennia marina HOM05D004613 ORTHO05D006095 5.7e-51 205.3 209 48.8
MELO3C015343.2 Cucumis melo HOM05D004613 ORTHO05D006095 5.7e-51 205.3 205 49.3
CANSAT54G0471 Cannabis sativa HOM05D004613 ORTHO05D006095 9.6e-51 204.5 200 48.5
FAN14G4578 Fragaria x ananassa HOM05D004613 ORTHO05D006095 9.6e-51 204.5 267 42.7
CSS0015750 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 2.1e-50 203.4 200 49.0
Cfa006537 Carpinus fangiana HOM05D004613 ORTHO05D006095 2.1e-50 203.4 198 48.5
FAN02G3501 Fragaria x ananassa HOM05D004613 ORTHO05D006095 2.1e-50 203.4 214 48.6
Solyc01g098630.3 Solanum lycopersicum HOM05D004613 ORTHO05D006095 2.8e-50 203.0 209 48.3
ATR0626G318 Amborella trichopoda HOM05D004613 ORTHO05D006095 3.7e-50 202.6 195 49.7
CDE12G0359 Ceratophyllum demersum HOM05D004613 ORTHO05D006095 3.7e-50 202.6 200 48.5
ECA232G1001 Erigeron canadensis HOM05D004613 ORTHO05D006095 3.7e-50 202.6 197 49.7
Migut.B01124 Erythranthe guttata HOM05D004613 ORTHO05D006095 3.7e-50 202.6 197 50.3
Sopen01g042180 Solanum pennellii HOM05D004613 ORTHO05D006095 3.7e-50 202.6 209 48.3
Haze_04249 Corylus avellana HOM05D004613 ORTHO05D006095 6.3e-50 201.8 198 48.0
Medtr1g082380 Medicago truncatula HOM05D004613 ORTHO05D006095 6.3e-50 201.8 219 47.0
TWI56G1338 Tripterygium wilfordii HOM05D004613 ORTHO05D006095 6.3e-50 201.8 225 45.8
Gohir.A08G212400 Gossypium hirsutum HOM05D004613 ORTHO05D006095 8.2e-50 201.4 205 47.8
CiPaw.08G167100 Carya illinoinensis HOM05D004613 ORTHO05D006095 1.1e-49 201.1 198 48.5
Atru.chr2.494 Acer truncatum HOM05D004613 ORTHO05D006095 1.4e-49 200.7 259 42.1
Gorai.004G243600 Gossypium raimondii HOM05D004613 ORTHO05D006095 1.8e-49 200.3 205 47.3
Gohir.D08G229400 Gossypium hirsutum HOM05D004613 ORTHO05D006095 2.4e-49 199.9 205 47.3
THA.LOC104818675 Tarenaya hassleriana HOM05D004613 ORTHO05D006095 3.1e-49 199.5 199 48.7
HanXRQChr09g0258721 Helianthus annuus HOM05D004613 ORTHO05D006095 5.3e-49 198.7 240 43.3
GSVIVG01022058001 Vitis vinifera HOM05D004613 ORTHO05D006095 5.3e-49 198.7 200 47.5
Thhalv10004565m.g Eutrema salsugineum HOM05D004613 ORTHO05D006095 9.0e-49 198.0 197 49.2
PGR083G0604 Punica granatum HOM05D004613 ORTHO05D006095 1.2e-48 197.6 214 47.7
Zm00001eb329390 Zea mays HOM05D004613 ORTHO05D006095 1.5e-48 197.2 209 44.0
QL03p004304 Quercus lobata HOM05D004613 ORTHO05D006095 4.5e-48 195.7 176 51.7
PSO170G6761 Papaver somniferum HOM05D004613 ORTHO05D006095 5.9e-48 195.3 207 47.3
PSO407G0072 Papaver somniferum HOM05D004613 ORTHO05D006095 5.9e-48 195.3 207 47.3
Sp2g20610 Schrenkiella parvula HOM05D004613 ORTHO05D006095 1.0e-47 194.5 199 48.2
arahy.Tifrunner.gnm1.ann1.LT91QM Arachis hypogaea HOM05D004613 ORTHO05D006095 1.3e-47 194.1 231 43.7
Peaxi162Scf00434g00335 Petunia axillaris HOM05D004613 ORTHO05D006095 1.7e-47 193.7 200 48.0
Potri.013G026700 Populus trichocarpa HOM05D004613 ORTHO05D006095 2.2e-47 193.4 209 47.8
Aa31LG11G9160 Aethionema arabicum HOM05D004613 ORTHO05D006095 3.8e-47 192.6 200 49.0
Lalb_Chr02g0148411 Lupinus albus HOM05D004613 ORTHO05D006095 3.8e-47 192.6 209 45.5
HPP92_006941 Vanilla planifolia HOM05D004613 ORTHO05D006095 3.8e-47 192.6 200 45.5
BcaNung04365 Brassica carinata HOM05D004613 ORTHO05D006095 5.0e-47 192.2 199 48.2
BcaNung02466 Brassica carinata HOM05D004613 ORTHO05D006095 8.4e-47 191.4 199 47.7
Carub.0006s2516 Capsella rubella HOM05D004613 ORTHO05D006095 5.5e-46 188.7 200 47.5
AL6G39630 Arabidopsis lyrata HOM05D004613 ORTHO05D006095 9.3e-46 188.0 200 47.5
Lsat_1_v5_gn_8_116060 Lactuca sativa HOM05D004613 ORTHO05D006095 9.3e-46 188.0 197 47.7
CARHR185980 Cardamine hirsuta HOM05D004613 ORTHO05D006095 1.2e-45 187.6 200 48.0
A06p37600 Brassica napus HOM05D004613 ORTHO05D006095 1.6e-45 187.2 199 46.7
Nitab4.5_0015025g0020 Nicotiana tabacum HOM05D004613 ORTHO05D006095 2.7e-45 186.4 212 45.3
BraA06t26679Z Brassica rapa HOM05D004613 ORTHO05D006095 3.5e-45 186.0 201 47.3
DCAR_015964 Daucus carota HOM05D004613 ORTHO05D006095 4.6e-45 185.7 208 45.7
vmacro05035 Vaccinium macrocarpon HOM05D004613 ORTHO05D006095 1.8e-44 183.7 205 44.4
AT5G27395 Arabidopsis thaliana HOM05D004613 ORTHO05D006095 3.9e-44 182.6 200 47.0
EL10Ac4g09300 Beta vulgaris HOM05D004613 ORTHO05D006095 3.9e-44 182.6 232 43.1
C07p40710 Brassica napus HOM05D004613 ORTHO05D006095 8.7e-44 181.4 214 44.4
Glyma.20G231400 Glycine max HOM05D004613 ORTHO05D006095 1.5e-43 180.6 181 51.4
BolC7t44599H Brassica oleracea HOM05D004613 ORTHO05D006095 1.9e-43 180.3 214 43.9
Lj9A681T39 Lonicera japonica HOM05D004613 ORTHO05D006095 4.3e-43 179.1 175 48.0
Nitab4.5_0004940g0150 Nicotiana tabacum HOM05D004613 ORTHO05D006095 1.6e-42 177.2 251 40.2
Prupe.6G330700 Prunus persica HOM05D004613 ORTHO05D006095 3.1e-41 172.9 212 43.4
SHI18214 Sapria himalayana HOM05D004613 ORTHO05D006095 4.5e-40 169.1 198 43.9
Rhsim07G0179300 Rhododendron simsii HOM05D004613 ORTHO05D006095 2.2e-39 166.8 264 35.6
Duzib128G1218 Durio zibethinus HOM05D004613 ORTHO05D006095 2.9e-39 166.4 211 39.8
Glyma.10G157300 Glycine max HOM05D004613 ORTHO05D006095 2.9e-39 166.4 209 42.6
MBI17_g29025_MAGBIO Magnolia biondii HOM05D004613 ORTHO05D006095 2.9e-39 166.4 170 49.4
TAR365G0571 Trochodendron aralioides HOM05D004613 ORTHO05D006095 5.0e-39 165.6 180 46.1
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 8.5e-39 164.9 173 46.2
PGR083G1611 Punica granatum HOM05D004613 ORTHO05D006095 1.2e-37 161.0 214 41.1
COL.COLO4_13522 Corchorus olitorius HOM05D004613 ORTHO05D006095 2.1e-37 160.2 212 41.0
SEGI_25140 Sequoiadendron giganteum HOM05D004613 ORTHO05D006095 7.9e-37 158.3 166 49.4
Dinv40253 Davidia involucrata HOM05D004613 ORTHO05D006095 3.9e-36 156.0 158 50.0
Nn1g02102 Nelumbo nucifera HOM05D004613 ORTHO05D006095 1.5e-35 154.1 146 52.1
Hund07039 Selenicereus undatus HOM05D004613 ORTHO05D006095 1.5e-32 144.1 200 41.0
SalBow8G2842 Salvia bowleyana HOM05D004613 ORTHO05D006095 9.4e-30 134.8 202 37.6
Cc02_g32610 Coffea canephora HOM05D004613 ORTHO05D006095 6.7e-28 128.6 132 51.5
BcaB04g19666 Brassica carinata HOM05D004613 ORTHO05D006095 1.1e-27 127.9 226 35.8
PGSC0003DMG400028600 Solanum tuberosum HOM05D004613 ORTHO05D006095 2.6e-27 126.7 141 48.9
CAN.G1134.17 Capsicum annuum HOM05D004613 ORTHO05D006095 1.2e-24 117.9 129 47.3
AUR62000861 Chenopodium quinoa HOM05D004613 ORTHO05D006095 1.2e-24 117.9 157 40.1
ClCG03G016790 Citrullus lanatus HOM05D000665 ORTHO05D006095 1.2e-24 117.9 288 28.5
MCO14G439 Micromonas commoda HOM05D004613 ORTHO05D006095 1.6e-24 117.5 231 32.5
Cpa.g.sc48.6 Carica papaya HOM05D004613 ORTHO05D006095 6.5e-23 112.1 107 51.4
SGA_v2.0_scaffold199G41179 Striga asiatica HOM05D004613 ORTHO05D006095 1.2e-21 107.8 199 37.2
AagrBONN_evm.TU.Sc2ySwM_117.373 Anthoceros agrestis HOM05D004613 ORTHO05D006095 4.7e-21 105.9 98 50.0
Actinidia05726 Actinidia chinensis HOM05D004613 ORTHO05D006095 1.3e-18 97.8 116 45.7
Oeu012099.1 Olea europaea HOM05D004613 ORTHO05D006095 5.3e-17 92.4 132 42.4
AUR62005113 Chenopodium quinoa HOM05D004613 ORTHO05D006095 7.7e-16 88.6 135 37.8
Cc02_g32600 Coffea canephora HOM05D004613 ORTHO05D006095 8.5e-15 85.1 72 47.2
unitig_747.g21346 Utricularia gibba HOM05D004613 ORTHO05D006095 7.2e-14 82.0 145 34.5
unitig_747.g21345 Utricularia gibba HOM05D004613 ORTHO05D006095 2.7e-13 80.1 68 47.1
Sabra13G0027500 Salix brachista HOM05D004613 ORTHO05D006095 3.6e-13 79.7 146 36.3
MD04G1209800 Malus domestica HOM05D004613 ORTHO05D006095 5.7e-11 72.4 143 37.1
MD04G1209900 Malus domestica HOM05D004613 ORTHO05D006095 9.8e-11 71.6 59 50.8
Cre02.g117300 Chlamydomonas reinhardtii HOM05D004613 ORTHO05D006095 1.3e-10 71.2 202 27.7
SEGI_04064 Sequoiadendron giganteum HOM05D004613 ORTHO05D006095 1.2e-08 64.7 47 48.9


User provided reference genes

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