Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 1.2e-256 889.4 462 100.0
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 5.4e-36 156.4 166 42.8
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 1.5e-33 148.3 172 45.3
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 9.9e-30 135.6 164 43.3
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 1.2e-27 128.6 238 33.6
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 3.5e-27 127.1 164 38.4
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 6.0e-27 126.3 164 39.0
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 6.0e-27 126.3 210 36.7
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 1.0e-26 125.6 165 38.8
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 1.0e-26 125.6 165 38.8
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 1.3e-26 125.2 160 39.4
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 1.3e-26 125.2 203 37.4
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 3.0e-26 124.0 198 35.4
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 3.0e-26 124.0 164 38.4
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 3.9e-26 123.6 163 39.3
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 5.1e-26 123.2 196 35.2
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 5.1e-26 123.2 165 38.2
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 5.1e-26 123.2 164 38.4
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 6.6e-26 122.9 205 33.7
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 8.6e-26 122.5 160 40.0
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 1.5e-25 121.7 163 39.3
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 1.5e-25 121.7 164 37.8
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 1.5e-25 121.7 160 39.4
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 2.5e-25 120.9 153 39.9
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 3.3e-25 120.6 206 35.0
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 3.3e-25 120.6 229 35.4
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 3.3e-25 120.6 160 38.8
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 4.3e-25 120.2 172 36.0
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 5.6e-25 119.8 208 34.1
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 7.3e-25 119.4 206 34.0
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 9.5e-25 119.0 160 39.4
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 9.5e-25 119.0 163 38.0
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 1.2e-24 118.6 206 34.0
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 1.2e-24 118.6 202 35.1
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 1.2e-24 118.6 213 31.9
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 1.2e-24 118.6 169 36.7
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 1.6e-24 118.2 205 33.2
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 1.6e-24 118.2 160 38.8
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 1.6e-24 118.2 196 34.7
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 2.1e-24 117.9 160 38.1
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 2.8e-24 117.5 213 31.0
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 2.8e-24 117.5 221 32.6
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 3.6e-24 117.1 168 35.1
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 3.6e-24 117.1 200 33.5
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 3.6e-24 117.1 123 44.7
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 3.6e-24 117.1 205 33.7
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 4.7e-24 116.7 206 33.5
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 4.7e-24 116.7 170 32.9
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 4.7e-24 116.7 205 33.7
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 4.7e-24 116.7 201 33.8
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 6.2e-24 116.3 213 31.9
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 6.2e-24 116.3 217 33.2
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 6.2e-24 116.3 237 32.9
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 8.1e-24 115.9 217 31.3
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 8.1e-24 115.9 218 31.7
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 8.1e-24 115.9 207 33.3
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 1.1e-23 115.5 167 35.3
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 1.4e-23 115.2 217 31.3
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 1.4e-23 115.2 199 33.2
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 1.4e-23 115.2 205 34.1
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 1.4e-23 115.2 167 36.5
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 1.8e-23 114.8 167 36.5
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 2.4e-23 114.4 209 33.5
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 2.4e-23 114.4 213 31.9
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 3.1e-23 114.0 165 37.6
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 3.1e-23 114.0 209 35.4
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 3.1e-23 114.0 164 36.6
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 3.1e-23 114.0 317 28.7
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 3.1e-23 114.0 213 34.3
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 4.0e-23 113.6 245 31.0
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 4.0e-23 113.6 192 34.4
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 5.2e-23 113.2 213 31.5
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 5.2e-23 113.2 210 31.0
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 5.2e-23 113.2 170 33.5
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 6.8e-23 112.8 297 29.0
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 8.9e-23 112.5 226 31.9
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 8.9e-23 112.5 206 33.0
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 3.4e-22 110.5 227 31.7
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 3.4e-22 110.5 215 32.6
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 5.8e-22 109.8 209 34.9
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 7.6e-22 109.4 198 30.8
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 1.3e-21 108.6 219 31.5
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 2.2e-21 107.8 225 28.4
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 2.2e-21 107.8 201 30.3
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 2.2e-21 107.8 232 33.2
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 4.9e-21 106.7 164 31.7
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 6.4e-21 106.3 168 32.1
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 8.4e-21 105.9 265 30.6
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 1.4e-20 105.1 168 31.0
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 1.4e-20 105.1 171 31.6
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 7.1e-20 102.8 132 40.2
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 7.1e-20 102.8 207 31.4
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 7.1e-20 102.8 164 36.0
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 2.7e-19 100.9 201 29.4
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 4.6e-19 100.1 206 31.6
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 6.0e-19 99.8 203 30.5
MCO16G170 Micromonas commoda HOM05D006765 ORTHO05D008554 3.9e-18 97.1 180 32.8
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 2.5e-17 94.4 179 33.0
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 5.6e-17 93.2 150 34.0
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 7.3e-17 92.8 121 36.4
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 7.3e-17 92.8 219 28.8
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 3.8e-13 80.5 285 24.2
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 1.9e-12 78.2 237 28.3
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 6.6e-10 69.7 93 32.3
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 2.5e-09 67.8 165 28.5
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 4.8e-08 63.5 90 41.1
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 1.5e-06 58.5 73 39.7


User provided reference genes

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