Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO115G0183 Selaginella moellendorffii HOM05D005925 ORTHO05D007270 5.1e-96 354.4 175 100.0
SMO115G0205 Selaginella moellendorffii HOM05D005925 ORTHO05D007270 7.7e-76 287.3 147 94.6
Thhalv10021280m.g Eutrema salsugineum HOM05D005925 ORTHO05D007270 3.2e-29 132.5 157 44.6
Sp3g17030 Schrenkiella parvula HOM05D005925 ORTHO05D007270 5.4e-29 131.7 161 43.5
AT3G18940 Arabidopsis thaliana HOM05D005925 ORTHO05D007270 9.2e-29 131.0 159 43.4
PGR142G0964 Punica granatum HOM05D005925 ORTHO05D007270 1.2e-28 130.6 158 43.7
BcaB06g25946 Brassica carinata HOM05D005925 ORTHO05D007270 1.6e-28 130.2 156 44.2
Ciclev10029009m.g Citrus clementina HOM05D005925 ORTHO05D007270 1.6e-28 130.2 158 42.4
AL3G32330 Arabidopsis lyrata HOM05D005925 ORTHO05D007270 2.0e-28 129.8 159 43.4
Pp3c2_22470 Physcomitrium patens HOM05D005925 ORTHO05D007270 2.7e-28 129.4 153 41.8
Pp3c2_22478 Physcomitrium patens HOM05D005925 ORTHO05D007270 2.7e-28 129.4 153 41.8
DCAR_003633 Daucus carota HOM05D005925 ORTHO05D007270 3.5e-28 129.0 156 43.6
Gohir.A03G214300 Gossypium hirsutum HOM05D005925 ORTHO05D007270 3.5e-28 129.0 156 42.9
Manes.17G097200 Manihot esculenta HOM05D005925 ORTHO05D007270 3.5e-28 129.0 158 43.0
TWI31G0896 Tripterygium wilfordii HOM05D005925 ORTHO05D007270 3.5e-28 129.0 156 43.6
BcaC01g03666 Brassica carinata HOM05D005925 ORTHO05D007270 4.6e-28 128.6 156 45.5
C03p49920 Brassica napus HOM05D005925 ORTHO05D007270 4.6e-28 128.6 156 45.5
BolC3t17285H Brassica oleracea HOM05D005925 ORTHO05D007270 4.6e-28 128.6 156 45.5
ECA234G0394 Erigeron canadensis HOM05D005925 ORTHO05D000001 6.0e-28 128.3 158 40.5
Nn6g32156 Nelumbo nucifera HOM05D005925 ORTHO05D007270 1.0e-27 127.5 158 41.8
Sc14g0001730 Simmondsia chinensis HOM05D005925 ORTHO05D007270 1.0e-27 127.5 156 42.9
TAR628G0202 Trochodendron aralioides HOM05D005925 ORTHO05D007270 1.0e-27 127.5 160 42.5
CANSAT25G2034 Cannabis sativa HOM05D005925 ORTHO05D007270 1.3e-27 127.1 157 41.4
Gohir.D02G235800 Gossypium hirsutum HOM05D005925 ORTHO05D007270 1.3e-27 127.1 156 42.3
Gorai.005G263900 Gossypium raimondii HOM05D005925 ORTHO05D007270 1.3e-27 127.1 156 42.3
Dinv23574 Davidia involucrata HOM05D005925 ORTHO05D007270 1.7e-27 126.7 158 43.0
C05p46520 Brassica napus HOM05D005925 ORTHO05D007270 3.0e-27 125.9 158 44.3
CARHR094360 Cardamine hirsuta HOM05D005925 ORTHO05D007270 3.0e-27 125.9 155 41.9
CiPaw.05G059200 Carya illinoinensis HOM05D005925 ORTHO05D007270 3.0e-27 125.9 158 42.4
A03p40910 Brassica napus HOM05D005925 ORTHO05D007270 3.9e-27 125.6 158 43.7
BraA03t13250Z Brassica rapa HOM05D005925 ORTHO05D007270 3.9e-27 125.6 158 43.7
A05p30640 Brassica napus HOM05D005925 ORTHO05D007270 6.6e-27 124.8 167 44.3
Aqoxy5G01754 Aquilegia oxysepala HOM05D005925 ORTHO05D007270 8.6e-27 124.4 157 41.4
HanXRQChr10g0307581 Helianthus annuus HOM05D005925 ORTHO05D007270 8.6e-27 124.4 158 40.5
RcHm_v2.0_Chr6g0261021 Rosa chinensis HOM05D005925 ORTHO05D007270 8.6e-27 124.4 159 40.3
Hund00298 Selenicereus undatus HOM05D005925 ORTHO05D007270 8.6e-27 124.4 167 41.3
Hund00305 Selenicereus undatus HOM05D005925 ORTHO05D007270 8.6e-27 124.4 167 41.3
QL11p039405 Quercus lobata HOM05D005925 ORTHO05D007270 1.5e-26 123.6 157 42.0
Actinidia17837 Actinidia chinensis HOM05D005925 ORTHO05D007270 1.9e-26 123.2 158 41.1
Aa31LG8G5780 Aethionema arabicum HOM05D005925 ORTHO05D007270 2.5e-26 122.9 161 45.3
Hma1.2p1_0584F.1_g183295 Hydrangea macrophylla HOM05D005925 ORTHO05D007270 2.5e-26 122.9 156 39.1
Oeu034077.1 Olea europaea HOM05D005925 ORTHO05D007270 2.5e-26 122.9 156 41.0
vmacro22671 Vaccinium macrocarpon HOM05D005925 ORTHO05D007270 2.5e-26 122.9 156 39.7
VMungo1127G2028 Vigna mungo HOM05D005925 ORTHO05D007270 2.5e-26 122.9 162 39.5
Eucgr.I01229 Eucalyptus grandis HOM05D005925 ORTHO05D007270 3.3e-26 122.5 156 42.9
Peaxi162Scf00016g01229 Petunia axillaris HOM05D005925 ORTHO05D007270 3.3e-26 122.5 155 40.6
Psat7g207080 Pisum sativum HOM05D005925 ORTHO05D007270 3.3e-26 122.5 158 39.9
FvH4_5g27360 Fragaria vesca HOM05D005925 ORTHO05D007270 5.6e-26 121.7 158 40.5
Thecc.02G029300 Theobroma cacao HOM05D005925 ORTHO05D007270 5.6e-26 121.7 156 41.0
GSVIVG01031883001 Vitis vinifera HOM05D005925 ORTHO05D007270 5.6e-26 121.7 157 42.0
arahy.Tifrunner.gnm1.ann1.EU6551 Arachis hypogaea HOM05D005925 ORTHO05D007270 7.3e-26 121.3 158 43.0
Lj3g0007485 Lotus japonicus HOM05D005925 ORTHO05D007270 7.3e-26 121.3 158 40.5
Lalb_Chr01g0002931 Lupinus albus HOM05D005925 ORTHO05D007270 7.3e-26 121.3 158 40.5
Phvul.011G049700 Phaseolus vulgaris HOM05D005925 ORTHO05D007270 7.3e-26 121.3 156 39.7
Ca_20823_v3 Cicer arietinum L. HOM05D005925 ORTHO05D007270 9.5e-26 120.9 161 40.4
arahy.Tifrunner.gnm1.ann1.JZQ5CR Arachis hypogaea HOM05D005925 ORTHO05D007270 1.2e-25 120.6 158 41.8
Cc02_g18140 Coffea canephora HOM05D005925 ORTHO05D007270 1.2e-25 120.6 157 40.8
Carub.0003s1876 Capsella rubella HOM05D005925 ORTHO05D007270 1.6e-25 120.2 159 40.3
MELO3C018414.2 Cucumis melo HOM05D005925 ORTHO05D007270 1.6e-25 120.2 156 40.4
Lj9C365T5 Lonicera japonica HOM05D005925 ORTHO05D007270 1.6e-25 120.2 158 39.9
Rhsim05G0078300 Rhododendron simsii HOM05D005925 ORTHO05D007270 1.6e-25 120.2 156 41.7
EL10Ac9g21785 Beta vulgaris HOM05D005925 ORTHO05D007270 2.1e-25 119.8 158 39.9
Cfa004956 Carpinus fangiana HOM05D005925 ORTHO05D007270 2.1e-25 119.8 158 40.5
COL.COLO4_17783 Corchorus olitorius HOM05D005925 ORTHO05D007270 2.1e-25 119.8 156 39.7
Medtr4g068475 Medicago truncatula HOM05D005925 ORTHO05D007270 2.1e-25 119.8 158 39.2
Duzib248G1621 Durio zibethinus HOM05D005925 ORTHO05D007270 2.8e-25 119.4 156 40.4
Potri.004G148500 Populus trichocarpa HOM05D005925 ORTHO05D007270 2.8e-25 119.4 158 39.9
Glyma.11G122900 Glycine max HOM05D005925 ORTHO05D007270 3.6e-25 119.0 157 40.1
QL09p038983 Quercus lobata HOM05D005925 ORTHO05D007270 3.6e-25 119.0 157 40.1
Solyc01g109130.3 Solanum lycopersicum HOM05D005925 ORTHO05D007270 3.6e-25 119.0 165 40.6
Sopen01g051330 Solanum pennellii HOM05D005925 ORTHO05D007270 3.6e-25 119.0 165 40.6
FAN04G2258 Fragaria x ananassa HOM05D005925 ORTHO05D007270 4.7e-25 118.6 170 40.0
Lsat_1_v5_gn_5_117341 Lactuca sativa HOM05D005925 ORTHO05D007270 4.7e-25 118.6 158 40.5
TPR.G10224 Trifolium pratense HOM05D005925 ORTHO05D007270 4.7e-25 118.6 158 38.6
CAN.G322.90 Capsicum annuum HOM05D005925 ORTHO05D007270 6.2e-25 118.2 165 39.4
AUR62011394 Chenopodium quinoa HOM05D005925 ORTHO05D007270 8.1e-25 117.9 164 40.2
CsaV3_7G010150 Cucumis sativus L. HOM05D005925 ORTHO05D007270 8.1e-25 117.9 167 37.1
PGSC0003DMG400025833 Solanum tuberosum HOM05D005925 ORTHO05D007270 8.1e-25 117.9 165 40.6
SGA_v2.0_scaffold13G06566 Striga asiatica HOM05D005925 ORTHO05D007270 8.1e-25 117.9 156 39.1
Os03g0766900 Oryza sativa ssp. japonica HOM05D005925 ORTHO05D007270 1.1e-24 117.5 154 42.9
SalBow3G3631 Salvia bowleyana HOM05D005925 ORTHO05D007270 1.1e-24 117.5 156 39.1
MSTRG.27750 Avicennia marina HOM05D005925 ORTHO05D007270 1.4e-24 117.1 155 39.4
Migut.N01222 Erythranthe guttata HOM05D005925 ORTHO05D007270 1.4e-24 117.1 155 38.7
SalBow1G0951 Salvia bowleyana HOM05D005925 ORTHO05D007270 1.4e-24 117.1 156 39.1
SGA_v2.0_scaffold55G19820 Striga asiatica HOM05D005925 ORTHO05D007270 1.4e-24 117.1 156 38.5
Glyma.12G047700 Glycine max HOM05D005925 ORTHO05D007270 1.8e-24 116.7 157 39.5
Potri.004G148700 Populus trichocarpa HOM05D005925 ORTHO05D007270 1.8e-24 116.7 158 39.2
MD10G1085900 Malus domestica HOM05D005925 ORTHO05D007270 2.3e-24 116.3 158 39.9
Prupe.8G110200 Prunus persica HOM05D005925 ORTHO05D007270 2.3e-24 116.3 160 39.4
Sed0018300 Sechium edule HOM05D005925 ORTHO05D007270 2.3e-24 116.3 158 38.0
ATR0733G151 Amborella trichopoda HOM05D005925 ORTHO05D007270 6.8e-24 114.8 158 38.6
Nitab4.5_0012894g0020 Nicotiana tabacum HOM05D005925 ORTHO05D007270 6.8e-24 114.8 164 40.2
FAN08G3356 Fragaria x ananassa HOM05D005925 ORTHO05D007270 8.9e-24 114.4 170 38.2
BcaB04g19013 Brassica carinata HOM05D005925 ORTHO05D007270 1.2e-23 114.0 158 43.7
FAN13G1680 Fragaria x ananassa HOM05D005925 ORTHO05D007270 2.0e-23 113.2 169 37.9
Zm00001eb058630 Zea mays HOM05D005925 ORTHO05D007270 2.6e-23 112.8 154 40.9
Haze_02451 Corylus avellana HOM05D005925 ORTHO05D007270 3.4e-23 112.5 173 35.8
PSO170G4903 Papaver somniferum HOM05D005925 ORTHO05D007270 3.4e-23 112.5 159 40.3
Ah.01g019810 Amaranthus hybridus HOM05D005925 ORTHO05D007270 4.4e-23 112.1 153 39.2
ClCG02G005470 Citrullus lanatus HOM05D005925 ORTHO05D007270 4.4e-23 112.1 164 38.4
THA.LOC104803449 Tarenaya hassleriana HOM05D005925 ORTHO05D007270 5.8e-23 111.7 167 40.1
CDE01G0621 Ceratophyllum demersum HOM05D005925 ORTHO05D007270 7.5e-23 111.3 154 39.6
PSO700G0338 Papaver somniferum HOM05D005925 ORTHO05D007270 1.7e-22 110.2 159 39.6
SEGI_41274 Sequoiadendron giganteum HOM05D005925 ORTHO05D007270 1.7e-22 110.2 146 39.7
Cpa.g.sc62.88 Carica papaya HOM05D005925 ORTHO05D007270 1.4e-21 107.1 145 40.0
FAN18G1621 Fragaria x ananassa HOM05D005925 ORTHO05D007270 2.4e-21 106.3 149 37.6
Mapoly0073s0081 Marchantia polymorpha HOM05D005925 ORTHO05D007270 5.4e-21 105.1 146 39.0
Sabra04G0098600 Salix brachista HOM05D005925 ORTHO05D007270 7.1e-21 104.8 145 37.2
Nitab4.5_0008189g0020 Nicotiana tabacum HOM05D005925 ORTHO05D007270 1.2e-20 104.0 144 38.9
Actinidia27921 Actinidia chinensis HOM05D005925 ORTHO05D007270 2.7e-20 102.8 148 40.5
MBI16_g31334_MAGBIO Magnolia biondii HOM05D005925 ORTHO05D007270 4.6e-20 102.1 205 32.2
unitig_8.g3429 Utricularia gibba HOM05D005925 ORTHO05D007270 3.0e-19 99.4 156 36.5
AagrBONN_evm.TU.Sc2ySwM_228.3883 Anthoceros agrestis HOM05D005925 ORTHO05D007270 1.5e-18 97.1 135 39.3
Haze_02453 Corylus avellana HOM05D005925 ORTHO05D007270 2.1e-17 93.2 172 33.1
HPP92_015723 Vanilla planifolia HOM05D005925 ORTHO05D007270 8.1e-17 91.3 134 37.3
FvH4_2g07422 Fragaria vesca HOM05D005925 ORTHO05D007270 1.2e-15 87.4 157 33.1
RcHm_v2.0_Chr6g0260971 Rosa chinensis HOM05D005925 ORTHO05D007270 4.4e-15 85.5 134 35.1
FAN15G3711 Fragaria x ananassa HOM05D001143 ORTHO05D001457 1.3e-14 84.0 133 35.3
CBR_g26043 Chara braunii HOM05D005925 ORTHO05D007270 5.1e-11 72.0 74 45.9
Atru.chr5.2902 Acer truncatum HOM05D005925 ORTHO05D007270 1.2e-07 60.8 44 61.4
FAN24G2811 Fragaria x ananassa HOM05D001143 ORTHO05D007270 1.5e-07 60.5 112 32.1
BraA05t21906Z Brassica rapa HOM05D005925 ORTHO05D007270 8.4e-06 54.7 48 52.1


User provided reference genes

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