Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO115G0133 Selaginella moellendorffii HOM05D023475 ORTHO05D026126 0.0e+00 1378.6 657 100.0
SMO166G0022 Selaginella moellendorffii HOM05D023475 ORTHO05D026126 9.0e-271 936.8 557 83.7
SMO147G0408 Selaginella moellendorffii HOM05D023475 ORTHO05D026126 7.0e-130 468.8 313 74.4
SMO330G0051 Selaginella moellendorffii HOM05D023475 ORTHO05D026126 4.4e-124 449.5 311 73.0
SMO107G0003 Selaginella moellendorffii HOM05D023475 ORTHO05D026126 6.1e-25 120.2 88 68.2
Mapoly0101s0058 Marchantia polymorpha HOM05D002809 ORTHO05D004939 1.2e-09 69.3 177 33.3
Migut.M00306 Erythranthe guttata HOM05D000007 ORTHO05D000039 4.7e-09 67.4 194 26.8
Duzib268G1054 Durio zibethinus HOM05D002809 ORTHO05D004563 1.8e-08 65.5 181 31.5
PSO017G6955 Papaver somniferum HOM05D002809 ORTHO05D004563 2.3e-08 65.1 181 29.8
Duzib248G0261 Durio zibethinus HOM05D002809 ORTHO05D004563 3.0e-08 64.7 195 29.2
PSO478G1885 Papaver somniferum HOM05D002809 ORTHO05D004563 3.0e-08 64.7 181 29.8
Migut.K00952 Erythranthe guttata HOM05D002809 ORTHO05D004563 6.8e-08 63.5 177 30.5
Pp3c11_18710 Physcomitrium patens HOM05D004302 ORTHO05D004939 6.8e-08 63.5 178 30.9
Pp3c24_1980 Physcomitrium patens HOM05D003005 ORTHO05D004563 6.8e-08 63.5 287 26.1
CANSAT01G2827 Cannabis sativa HOM05D002809 ORTHO05D004563 8.8e-08 63.2 178 30.9
Nitab4.5_0004914g0010 Nicotiana tabacum HOM05D002809 ORTHO05D004563 8.8e-08 63.2 177 29.4
Cc11_g17010 Coffea canephora HOM05D002809 ORTHO05D004563 1.5e-07 62.4 186 30.1
SGA_v2.0_scaffold5G02610 Striga asiatica HOM05D000007 ORTHO05D000039 1.5e-07 62.4 227 27.8
Glyma.08G104800 Glycine max HOM05D002809 ORTHO05D004563 2.6e-07 61.6 187 29.4
Lj3P1070T8 Lonicera japonica HOM05D002809 ORTHO05D004563 2.6e-07 61.6 227 27.8
unitig_747.g21123 Utricularia gibba HOM05D002809 ORTHO05D004563 2.6e-07 61.6 179 31.8
MSTRG.8011 Avicennia marina HOM05D002809 ORTHO05D004563 4.4e-07 60.8 181 31.5
MBI07_g18750_MAGBIO Magnolia biondii HOM05D002809 ORTHO05D004563 5.7e-07 60.5 179 30.2
Manes.12G010000 Manihot esculenta HOM05D002809 ORTHO05D004563 5.7e-07 60.5 180 28.9
SalBow2G0967 Salvia bowleyana HOM05D002809 ORTHO05D004563 5.7e-07 60.5 246 26.4
Mapoly0137s0025 Marchantia polymorpha HOM05D004302 ORTHO05D004939 1.3e-06 59.3 211 30.3
Pp3c7_9930 Physcomitrium patens HOM05D002809 ORTHO05D004939 1.3e-06 59.3 210 28.1
HPP92_002171 Vanilla planifolia HOM05D006415 ORTHO05D008549 1.3e-06 59.3 120 34.2
Cc00_g01300 Coffea canephora HOM05D000007 ORTHO05D000017 1.7e-06 58.9 194 30.4
Dinv17569 Davidia involucrata HOM05D002809 ORTHO05D004563 2.2e-06 58.5 180 28.9
THA.LOC104807128 Tarenaya hassleriana HOM05D002809 ORTHO05D004563 2.8e-06 58.2 183 29.5
THA.LOC104807136 Tarenaya hassleriana HOM05D002809 ORTHO05D004563 2.8e-06 58.2 183 29.5
CAN.G70.10 Capsicum annuum HOM05D002809 ORTHO05D004563 3.7e-06 57.8 181 28.2
Migut.M00305 Erythranthe guttata HOM05D000007 ORTHO05D000039 3.7e-06 57.8 186 25.3
Gorai.005G165900 Gossypium raimondii HOM05D002809 ORTHO05D004563 3.7e-06 57.8 181 27.6
Mapoly0003s0155 Marchantia polymorpha HOM05D002809 ORTHO05D004563 3.7e-06 57.8 179 31.3
SMO364G0869 Selaginella moellendorffii HOM05D003005 ORTHO05D004563 3.7e-06 57.8 123 34.1
unitig_22.g6404 Utricularia gibba HOM05D002809 ORTHO05D004563 3.7e-06 57.8 183 28.4
Rhsim12G0092200 Rhododendron simsii HOM05D002809 ORTHO05D004563 4.8e-06 57.4 186 28.5
CSS0014036 Camellia sinensis var. sinensis HOM05D002809 ORTHO05D004563 6.3e-06 57.0 178 28.7
Solyc05g015520.3 Solanum lycopersicum HOM05D002809 ORTHO05D004563 6.3e-06 57.0 180 29.4
Sopen12g034970 Solanum pennellii HOM05D002809 ORTHO05D004563 6.3e-06 57.0 180 29.4
TWI14G0325 Tripterygium wilfordii HOM05D003005 ORTHO05D004170 6.3e-06 57.0 182 30.2
Aa31LG11G13870 Aethionema arabicum HOM05D004302 ORTHO05D004939 8.3e-06 56.6 189 30.7
AagrBONN_evm.TU.Sc2ySwM_228.5093 Anthoceros agrestis HOM05D006114 ORTHO05D038358 8.3e-06 56.6 194 32.0


User provided reference genes

Program Settings