Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO114G0076 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 3.2e-217 758.1 360 100.0
SMO358G0106 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 1.5e-126 456.8 376 58.5
SMO147G0400 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 4.4e-94 349.0 334 49.4
A05p33300 Brassica napus HOM05D004680 ORTHO05D005939 6.0e-91 338.6 333 49.2
GSVIVG01017045001 Vitis vinifera HOM05D004680 ORTHO05D005939 6.0e-91 338.6 338 48.5
C05p50300 Brassica napus HOM05D004680 ORTHO05D005939 1.3e-90 337.4 333 49.2
Sp3g14570 Schrenkiella parvula HOM05D004680 ORTHO05D005939 1.7e-90 337.0 332 48.5
THA.LOC104817975 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 3.0e-90 336.3 332 48.2
SalBow2G2497 Salvia bowleyana HOM05D004680 ORTHO05D005939 3.9e-90 335.9 332 48.5
BraA05t22155Z Brassica rapa HOM05D004680 ORTHO05D005939 5.1e-90 335.5 333 48.6
BcaC09g48589 Brassica carinata HOM05D004680 ORTHO05D005939 6.6e-90 335.1 332 48.2
Thhalv10020703m.g Eutrema salsugineum HOM05D004680 ORTHO05D005939 8.6e-90 334.7 332 47.9
Lj3g0026249 Lotus japonicus HOM05D004680 ORTHO05D005939 8.6e-90 334.7 382 45.5
Medtr2g101480 Medicago truncatula HOM05D004680 ORTHO05D005939 1.1e-89 334.3 338 48.5
Lalb_Chr22g0351431 Lupinus albus HOM05D004680 ORTHO05D005939 1.5e-89 334.0 332 48.2
THA.LOC104815523 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 1.5e-89 334.0 332 47.9
arahy.Tifrunner.gnm1.ann1.I8Y04W Arachis hypogaea HOM05D004680 ORTHO05D005939 1.9e-89 333.6 332 48.8
A01p37900 Brassica napus HOM05D004680 ORTHO05D005939 1.9e-89 333.6 333 48.3
BraA01t03850Z Brassica rapa HOM05D004680 ORTHO05D005939 1.9e-89 333.6 333 48.3
Manes.11G036700 Manihot esculenta HOM05D004680 ORTHO05D005939 1.9e-89 333.6 332 47.6
AT3G16200 Arabidopsis thaliana HOM05D004680 ORTHO05D005939 2.5e-89 333.2 332 47.6
arahy.Tifrunner.gnm1.ann1.0TRA3C Arachis hypogaea HOM05D004680 ORTHO05D005939 2.5e-89 333.2 332 48.8
CANSAT56G3143 Cannabis sativa HOM05D004680 ORTHO05D005939 2.5e-89 333.2 332 47.6
Gohir.A10G067300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 2.5e-89 333.2 332 47.9
Nitab4.5_0000351g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 2.5e-89 333.2 332 48.5
QL05p021321 Quercus lobata HOM05D004680 ORTHO05D005939 2.5e-89 333.2 332 47.3
Thecc.06G095100 Theobroma cacao HOM05D004680 ORTHO05D005939 2.5e-89 333.2 338 48.8
Ca_01140_v3 Cicer arietinum L. HOM05D004680 ORTHO05D005939 4.3e-89 332.4 338 47.9
Lalb_Chr24g0395991 Lupinus albus HOM05D004680 ORTHO05D005939 4.3e-89 332.4 332 48.2
C01p48080 Brassica napus HOM05D004680 ORTHO05D005939 5.6e-89 332.0 333 48.0
Carub.0003s1595 Capsella rubella HOM05D004680 ORTHO05D005939 5.6e-89 332.0 332 47.9
Nitab4.5_0009963g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 5.6e-89 332.0 332 48.5
Phvul.005G169700 Phaseolus vulgaris HOM05D004680 ORTHO05D005939 5.6e-89 332.0 357 45.7
Migut.D01009 Erythranthe guttata HOM05D004680 ORTHO05D005939 7.3e-89 331.6 332 47.3
Glyma.13G356500 Glycine max HOM05D004680 ORTHO05D005939 7.3e-89 331.6 338 48.2
Gohir.D10G069100 Gossypium hirsutum HOM05D004680 ORTHO05D005939 7.3e-89 331.6 332 47.9
Aa31LG8G3340 Aethionema arabicum HOM05D004680 ORTHO05D005939 9.5e-89 331.3 333 48.6
AL3G28890 Arabidopsis lyrata HOM05D004680 ORTHO05D005939 9.5e-89 331.3 332 47.3
BolC5t33780H Brassica oleracea HOM05D004680 ORTHO05D005939 9.5e-89 331.3 330 49.1
Ciclev10025565m.g Citrus clementina HOM05D004680 ORTHO05D005939 9.5e-89 331.3 332 46.7
Nn2g11656 Nelumbo nucifera HOM05D004680 ORTHO05D005939 9.5e-89 331.3 338 47.6
Rhsim08G0225100 Rhododendron simsii HOM05D004680 ORTHO05D005939 9.5e-89 331.3 336 47.3
Sc12g0009530 Simmondsia chinensis HOM05D004680 ORTHO05D005939 9.5e-89 331.3 332 47.6
TPR.G37217 Trifolium pratense HOM05D004680 ORTHO05D005939 9.5e-89 331.3 373 45.3
CSS0039709 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 1.2e-88 330.9 332 47.3
CiPaw.02G147900 Carya illinoinensis HOM05D004680 ORTHO05D005939 1.2e-88 330.9 332 47.3
CsaV3_3G023810 Cucumis sativus L. HOM05D004680 ORTHO05D005939 1.2e-88 330.9 338 47.9
Gorai.011G073000 Gossypium raimondii HOM05D004680 ORTHO05D005939 1.2e-88 330.9 332 47.9
MD17G1189000 Malus domestica HOM05D004680 ORTHO05D005939 1.2e-88 330.9 331 47.7
MELO3C012983.2 Cucumis melo HOM05D004680 ORTHO05D005939 1.6e-88 330.5 338 47.9
Glyma.15G017600 Glycine max HOM05D004680 ORTHO05D005939 1.6e-88 330.5 338 48.5
Gorai.009G136000 Gossypium raimondii HOM05D004680 ORTHO05D005939 1.6e-88 330.5 338 47.9
Cc04_g02880 Coffea canephora HOM05D004680 ORTHO05D005939 2.1e-88 330.1 336 47.3
MSTRG.22656 Avicennia marina HOM05D004680 ORTHO05D005939 2.8e-88 329.7 332 46.7
Gohir.A05G127800 Gossypium hirsutum HOM05D004680 ORTHO05D005939 2.8e-88 329.7 338 47.9
BolC1t04776H Brassica oleracea HOM05D004680 ORTHO05D005939 3.6e-88 329.3 333 47.7
Potri.003G051200 Populus trichocarpa HOM05D004680 ORTHO05D005939 6.2e-88 328.6 332 47.9
CARHR091390 Cardamine hirsuta HOM05D004680 ORTHO05D005939 8.1e-88 328.2 332 46.7
FAN09G3354 Fragaria x ananassa HOM05D004680 ORTHO05D005939 8.1e-88 328.2 332 45.8
Lalb_Chr14g0373141 Lupinus albus HOM05D004680 ORTHO05D005939 8.1e-88 328.2 332 47.0
PGR102G2014 Punica granatum HOM05D004680 ORTHO05D005939 8.1e-88 328.2 332 47.9
Cfa002107 Carpinus fangiana HOM05D004680 ORTHO05D005939 1.1e-87 327.8 332 46.7
Dinv30468 Davidia involucrata HOM05D004680 ORTHO05D005939 1.1e-87 327.8 332 47.3
Migut.I00930 Erythranthe guttata HOM05D004680 ORTHO05D005939 1.1e-87 327.8 332 47.3
vmacro18875 Vaccinium macrocarpon HOM05D004680 ORTHO05D005939 1.1e-87 327.8 337 46.6
Duzib235G0372 Durio zibethinus HOM05D004680 ORTHO05D005939 1.8e-87 327.0 338 47.9
Eucgr.F03051 Eucalyptus grandis HOM05D004680 ORTHO05D005939 1.8e-87 327.0 332 47.3
FvH4_6g31940 Fragaria vesca HOM05D004680 ORTHO05D005939 1.8e-87 327.0 332 45.8
HanXRQChr02g0032341 Helianthus annuus HOM05D004680 ORTHO05D005939 1.8e-87 327.0 338 47.3
Peaxi162Scf00015g00135 Petunia axillaris HOM05D004680 ORTHO05D005939 1.8e-87 327.0 332 47.9
RcHm_v2.0_Chr2g0139361 Rosa chinensis HOM05D004680 ORTHO05D005939 1.8e-87 327.0 332 46.1
CSS0028346 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 2.3e-87 326.6 339 46.9
Nn3g18134 Nelumbo nucifera HOM05D004680 ORTHO05D005939 3.1e-87 326.2 332 47.6
SalBow7G2677 Salvia bowleyana HOM05D004680 ORTHO05D005939 3.1e-87 326.2 331 46.8
Ah.01g021760 Amaranthus hybridus HOM05D004680 ORTHO05D005939 4.0e-87 325.9 332 46.7
Duzib192G0285 Durio zibethinus HOM05D004680 ORTHO05D005939 4.0e-87 325.9 338 47.3
TWI75G1773 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 4.0e-87 325.9 372 44.6
Hma1.2p1_1262F.1_g271230 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 5.2e-87 325.5 336 46.4
PSO566G0328 Papaver somniferum HOM05D004680 ORTHO05D005939 5.2e-87 325.5 338 46.2
MBI04_g14933_MAGBIO Magnolia biondii HOM05D004680 ORTHO05D005939 6.8e-87 325.1 334 46.7
Sabra01G0153900 Salix brachista HOM05D004680 ORTHO05D005939 6.8e-87 325.1 332 47.3
Sed0024237 Sechium edule HOM05D004680 ORTHO05D005939 6.8e-87 325.1 338 47.6
Hund06644 Selenicereus undatus HOM05D004680 ORTHO05D005939 6.8e-87 325.1 332 46.4
SEGI_20570 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 6.8e-87 325.1 371 43.1
SGA_v2.0_scaffold69G23355 Striga asiatica HOM05D004680 ORTHO05D005939 6.8e-87 325.1 335 46.9
ClCG07G013200 Citrullus lanatus HOM05D004680 ORTHO05D005939 8.9e-87 324.7 338 47.0
TWI12G0154 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 8.9e-87 324.7 338 47.3
MD09G1207900 Malus domestica HOM05D004680 ORTHO05D005939 1.2e-86 324.3 332 46.7
Sabra03G0027900 Salix brachista HOM05D004680 ORTHO05D005939 1.2e-86 324.3 338 47.3
AUR62031868 Chenopodium quinoa HOM05D004680 ORTHO05D005939 2.0e-86 323.6 357 43.7
Solyc03g120490.3 Solanum lycopersicum HOM05D004680 ORTHO05D005939 2.0e-86 323.6 332 46.7
ATR0315G163 Amborella trichopoda HOM05D004680 ORTHO05D005939 2.6e-86 323.2 341 46.6
Aqoxy7G01528 Aquilegia oxysepala HOM05D004680 ORTHO05D005939 3.4e-86 322.8 338 46.4
EL10Ac9g22049 Beta vulgaris HOM05D004680 ORTHO05D005939 3.4e-86 322.8 332 45.5
AUR62016515 Chenopodium quinoa HOM05D004680 ORTHO05D005939 3.4e-86 322.8 338 45.9
Sed0009248 Sechium edule HOM05D004680 ORTHO05D005939 3.4e-86 322.8 341 47.2
PGSC0003DMG400002632 Solanum tuberosum HOM05D004680 ORTHO05D005939 3.4e-86 322.8 332 46.7
MSTRG.9470 Avicennia marina HOM05D004680 ORTHO05D005939 4.4e-86 322.4 332 47.0
PSO782G2876 Papaver somniferum HOM05D004680 ORTHO05D005939 4.4e-86 322.4 338 45.9
Sopen03g039370 Solanum pennellii HOM05D004680 ORTHO05D005939 4.4e-86 322.4 332 46.4
HPP92_021671 Vanilla planifolia HOM05D004680 ORTHO05D005939 5.8e-86 322.0 332 46.4
Potri.001G186200 Populus trichocarpa HOM05D004680 ORTHO05D005939 7.6e-86 321.6 332 47.0
TAR383G0102 Trochodendron aralioides HOM05D004680 ORTHO05D005939 7.6e-86 321.6 332 45.8
Nitab4.5_0006985g0040 Nicotiana tabacum HOM05D004680 ORTHO05D005939 1.3e-85 320.9 343 46.1
Prupe.3G064100 Prunus persica HOM05D004680 ORTHO05D005939 2.2e-85 320.1 334 46.7
VMungo1080G0622 Vigna mungo HOM05D004680 ORTHO05D005939 2.2e-85 320.1 367 43.6
Cpa.g.sc109.43 Carica papaya HOM05D004680 ORTHO05D005939 3.7e-85 319.3 332 45.5
SMO077G0005 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 8.4e-85 318.2 318 47.8
CDE02G3046 Ceratophyllum demersum HOM05D004680 ORTHO05D005939 1.1e-84 317.8 328 45.4
Atru.BG.177.p Acer truncatum HOM05D004680 ORTHO05D005939 2.4e-84 316.6 320 46.6
ECA247G0440 Erigeron canadensis HOM05D004680 ORTHO05D005939 2.4e-84 316.6 332 47.9
DCAR_023071 Daucus carota HOM05D004680 ORTHO05D005939 1.2e-83 314.3 320 47.8
FAN14G5860 Fragaria x ananassa HOM05D004680 ORTHO05D005939 3.5e-83 312.8 348 42.8
Lsat_1_v5_gn_1_34800 Lactuca sativa HOM05D004680 ORTHO05D005939 3.5e-83 312.8 326 46.9
Actinidia21693 Actinidia chinensis HOM05D004680 ORTHO05D005939 4.6e-83 312.4 323 46.7
SGA_v2.0_scaffold4G02014 Striga asiatica HOM05D004680 ORTHO05D005939 7.8e-83 311.6 329 45.6
Peaxi162Scf00207g01238 Petunia axillaris HOM05D004680 ORTHO05D005939 1.7e-82 310.5 325 47.4
QL11p016400 Quercus lobata HOM05D004680 ORTHO05D005939 6.6e-82 308.5 322 45.7
Zm00001eb270670 Zea mays HOM05D004680 ORTHO05D005939 6.6e-82 308.5 343 44.6
Nitab4.5_0011578g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 2.5e-81 306.6 320 46.2
Manes.04G131400 Manihot esculenta HOM05D004680 ORTHO05D005939 8.1e-80 301.6 324 44.8
Pp3c17_20690 Physcomitrium patens HOM05D004680 ORTHO05D005939 1.4e-79 300.8 338 43.5
unitig_899.g14773 Utricularia gibba HOM05D004680 ORTHO05D005939 1.5e-78 297.4 330 44.8
Oeu050619.1 Olea europaea HOM05D004680 ORTHO05D005939 2.0e-78 297.0 404 38.6
Lsat_1_v5_gn_4_101400 Lactuca sativa HOM05D004680 ORTHO05D005939 4.4e-78 295.8 312 45.5
SGA_v2.0_scaffold5G02541 Striga asiatica HOM05D004680 ORTHO05D005939 4.9e-77 292.4 332 43.7
Actinidia32715 Actinidia chinensis HOM05D004680 ORTHO05D005939 4.2e-76 289.3 284 48.2
SHI25904 Sapria himalayana HOM05D004680 ORTHO05D005939 1.6e-75 287.3 284 47.5
FAN05G4921 Fragaria x ananassa HOM05D004680 ORTHO05D005939 3.0e-74 283.1 284 45.1
Psat5g297320 Pisum sativum HOM05D004680 ORTHO05D005939 3.9e-74 282.7 284 46.5
CiPaw.01G234300 Carya illinoinensis HOM05D004680 ORTHO05D005939 4.3e-73 279.3 284 46.1
AagrBONN_evm.TU.Sc2ySwM_369.193 Anthoceros agrestis HOM05D004680 ORTHO05D005939 4.4e-70 269.2 281 46.6
COL.COLO4_30464 Corchorus olitorius HOM05D004680 ORTHO05D005939 3.4e-62 243.0 264 44.7
Dinv38006 Davidia involucrata HOM05D004680 ORTHO05D005939 7.9e-59 231.9 245 46.1
Hma1.2p1_1617F.1_g293780 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 7.9e-59 231.9 297 42.8
Gohir.D05G132300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 6.7e-50 202.2 199 50.3
Haze_16340 Corylus avellana HOM05D004680 ORTHO05D005939 2.5e-49 200.3 193 49.2
Sc12g0009700 Simmondsia chinensis HOM05D004680 ORTHO05D005939 4.3e-49 199.5 193 48.7
HPP92_008141 Vanilla planifolia HOM05D004680 ORTHO05D005939 7.7e-38 162.2 166 48.2
Haze_11589 Corylus avellana HOM05D004680 ORTHO05D005939 1.2e-30 138.3 135 45.2
SEGI_33813 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 2.1e-27 127.5 139 41.7
HPP92_008142 Vanilla planifolia HOM05D004680 ORTHO05D005939 2.0e-22 110.9 118 41.5
Oeu063940.2 Olea europaea HOM05D004680 ORTHO05D007319 4.5e-22 109.8 173 35.3
PGSC0003DMG400007734 Solanum tuberosum HOM05D004680 ORTHO05D005939 1.0e-21 108.6 120 39.2
Oeu040360.1 Olea europaea HOM05D004680 ORTHO05D011268 2.3e-18 97.4 127 39.4
TWI75G1313 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 3.0e-18 97.1 108 42.6
Zm00001eb389580 Zea mays HOM05D004680 ORTHO05D000383 2.1e-11 74.3 83 48.2
Hma1.2p1_0033F.1_g020650 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 6.1e-11 72.8 80 45.0
Hma1.2p1_1576F.1_g291660 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 1.4e-10 71.6 80 43.8
Atru.chr1.3422 Acer truncatum HOM05D004680 ORTHO05D005939 1.4e-07 61.6 98 29.6


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