Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 1.1e-65 253.1 125 100.0
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 4.2e-52 208.0 122 82.0
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 5.5e-52 207.6 125 80.0
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 9.4e-52 206.8 125 80.8
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 9.4e-52 206.8 125 78.4
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 1.2e-51 206.5 125 78.4
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 1.2e-51 206.5 125 79.2
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 1.2e-51 206.5 125 80.0
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 1.2e-51 206.5 125 80.0
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 2.1e-51 205.7 125 78.4
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 2.7e-51 205.3 125 80.0
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 3.6e-51 204.9 125 79.2
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 3.6e-51 204.9 125 79.2
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 4.7e-51 204.5 125 80.0
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 4.7e-51 204.5 125 79.2
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 4.7e-51 204.5 127 76.4
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 6.1e-51 204.1 125 79.2
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 6.1e-51 204.1 125 80.8
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 6.1e-51 204.1 125 79.2
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 8.0e-51 203.8 125 78.4
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 1.0e-50 203.4 125 77.6
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 1.0e-50 203.4 125 80.0
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 1.4e-50 203.0 127 75.6
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 1.4e-50 203.0 125 77.6
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 1.8e-50 202.6 125 77.6
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 1.8e-50 202.6 125 77.6
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 1.8e-50 202.6 125 79.2
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 1.8e-50 202.6 125 76.8
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 1.8e-50 202.6 125 76.8
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 2.3e-50 202.2 125 78.4
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 2.3e-50 202.2 125 77.6
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 2.3e-50 202.2 125 79.2
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 2.3e-50 202.2 125 79.2
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 2.3e-50 202.2 125 77.6
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 2.3e-50 202.2 125 76.0
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 3.0e-50 201.8 125 77.6
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 4.0e-50 201.4 125 80.0
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 4.0e-50 201.4 125 78.4
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 4.0e-50 201.4 125 76.8
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 5.2e-50 201.1 125 76.8
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 5.2e-50 201.1 125 78.4
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 5.2e-50 201.1 122 79.5
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 5.2e-50 201.1 125 76.8
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 6.7e-50 200.7 125 76.8
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 6.7e-50 200.7 125 77.6
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 6.7e-50 200.7 125 76.8
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 8.8e-50 200.3 125 76.8
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 8.8e-50 200.3 125 76.8
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 8.8e-50 200.3 125 76.0
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 1.2e-49 199.9 125 77.6
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 1.2e-49 199.9 125 77.6
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 1.2e-49 199.9 125 77.6
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 1.5e-49 199.5 125 76.0
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 1.5e-49 199.5 125 76.8
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 1.5e-49 199.5 125 76.8
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 1.5e-49 199.5 125 76.8
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 1.5e-49 199.5 125 76.8
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 1.5e-49 199.5 125 76.8
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 2.0e-49 199.1 125 77.6
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 2.0e-49 199.1 125 76.0
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 2.0e-49 199.1 126 76.2
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 3.3e-49 198.4 125 75.2
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 3.3e-49 198.4 125 75.2
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 3.3e-49 198.4 125 75.2
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 3.3e-49 198.4 125 75.2
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 3.3e-49 198.4 125 75.2
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 3.3e-49 198.4 125 75.2
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 3.3e-49 198.4 125 75.2
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 4.4e-49 198.0 125 76.8
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 4.4e-49 198.0 125 75.2
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 4.4e-49 198.0 125 76.8
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 4.4e-49 198.0 125 76.8
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 7.5e-49 197.2 125 74.4
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 7.5e-49 197.2 125 74.4
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 9.7e-49 196.8 125 74.4
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 9.7e-49 196.8 125 74.4
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 1.3e-48 196.4 125 75.2
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 1.7e-48 196.1 142 70.4
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 2.2e-48 195.7 125 76.0
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 3.7e-48 194.9 124 75.0
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 3.7e-48 194.9 125 74.4
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 4.8e-48 194.5 127 75.6
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.6e-46 189.5 119 76.5
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.6e-46 189.5 119 76.5
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 1.3e-45 186.4 125 70.4
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 1.0e-42 176.8 122 72.1
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 1.5e-41 172.9 109 75.2
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 2.8e-40 168.7 113 71.7
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 3.7e-40 168.3 106 77.4
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 3.1e-39 165.2 103 77.7
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 1.2e-38 163.3 106 75.5
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 1.6e-38 162.9 137 61.3
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 2.0e-38 162.5 125 68.0
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 7.7e-38 160.6 103 75.7
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 1.0e-37 160.2 103 75.7
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 2.2e-32 142.5 122 53.3
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 1.1e-28 130.2 125 56.8
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 2.3e-26 122.5 115 58.3
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 3.5e-22 108.6 67 82.1
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 8.6e-21 104.0 125 48.0
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 1.1e-20 103.6 125 47.2
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 1.8e-18 96.3 56 80.4
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 4.4e-17 91.7 124 41.1
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 5.8e-17 91.3 74 60.8
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 1.3e-16 90.1 84 58.3
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 1.4e-15 86.7 58 69.0
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 3.2e-15 85.5 58 67.2
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 1.1e-12 77.0 129 29.5
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 1.7e-08 63.2 101 32.7
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 8.3e-08 60.8 45 68.9
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 7.1e-07 57.8 45 66.7


User provided reference genes

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