Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 8.1e-82 307.0 152 100.0
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 2.1e-29 132.9 138 49.3
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 8.0e-29 131.0 138 49.3
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 1.8e-28 129.8 137 45.3
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 4.0e-28 128.6 138 48.6
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 4.0e-28 128.6 138 46.4
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 5.2e-28 128.3 138 47.8
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 6.8e-28 127.9 138 47.1
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 6.8e-28 127.9 138 48.6
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 8.8e-28 127.5 138 48.6
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 8.8e-28 127.5 138 47.1
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 1.2e-27 127.1 138 48.6
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 1.2e-27 127.1 138 47.8
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 1.2e-27 127.1 138 47.8
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 1.5e-27 126.7 138 48.6
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 2.0e-27 126.3 138 47.8
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 2.6e-27 125.9 138 47.1
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 2.6e-27 125.9 138 47.8
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 2.6e-27 125.9 138 45.7
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 2.6e-27 125.9 138 47.1
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 3.4e-27 125.6 138 47.8
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 4.4e-27 125.2 138 47.1
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 4.4e-27 125.2 140 46.4
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 4.4e-27 125.2 138 46.4
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 4.4e-27 125.2 138 46.4
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 5.7e-27 124.8 138 47.8
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 5.7e-27 124.8 138 47.1
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 5.7e-27 124.8 138 45.7
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 7.5e-27 124.4 138 45.7
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 7.5e-27 124.4 138 47.8
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 7.5e-27 124.4 138 46.4
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 9.8e-27 124.0 138 46.4
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 1.3e-26 123.6 138 45.7
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 1.3e-26 123.6 138 47.1
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 1.7e-26 123.2 138 46.4
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 2.2e-26 122.9 138 45.7
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 2.2e-26 122.9 138 46.4
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 2.8e-26 122.5 137 46.7
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 2.8e-26 122.5 138 45.7
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 3.7e-26 122.1 138 45.7
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 3.7e-26 122.1 138 47.1
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 4.8e-26 121.7 138 47.1
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 6.3e-26 121.3 138 46.4
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 6.3e-26 121.3 138 46.4
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 8.3e-26 120.9 138 46.4
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 8.3e-26 120.9 138 46.4
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 8.3e-26 120.9 138 46.4
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 8.3e-26 120.9 138 46.4
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 8.3e-26 120.9 138 45.7
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 8.3e-26 120.9 138 46.4
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 1.4e-25 120.2 137 43.1
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 1.4e-25 120.2 138 44.9
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 1.4e-25 120.2 138 44.9
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 1.4e-25 120.2 138 44.9
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 1.4e-25 120.2 138 44.9
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 1.8e-25 119.8 138 44.9
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 1.8e-25 119.8 138 45.7
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 1.8e-25 119.8 138 44.9
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 1.8e-25 119.8 138 44.9
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 2.4e-25 119.4 138 44.9
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 2.4e-25 119.4 138 44.9
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 2.4e-25 119.4 138 44.9
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 3.1e-25 119.0 138 45.7
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 3.1e-25 119.0 138 44.9
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 5.4e-25 118.2 138 46.4
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 5.4e-25 118.2 138 46.4
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 5.4e-25 118.2 138 46.4
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 5.4e-25 118.2 138 44.9
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 5.4e-25 118.2 138 45.7
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 5.4e-25 118.2 138 46.4
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 5.4e-25 118.2 138 43.5
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 5.4e-25 118.2 138 44.9
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 7.0e-25 117.9 138 46.4
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 7.0e-25 117.9 138 46.4
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 7.0e-25 117.9 138 46.4
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 7.0e-25 117.9 138 44.9
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 7.0e-25 117.9 138 45.7
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 7.0e-25 117.9 138 44.2
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 7.0e-25 117.9 138 44.9
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 7.0e-25 117.9 153 41.8
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 9.1e-25 117.5 138 44.9
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 9.1e-25 117.5 138 45.7
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 1.6e-24 116.7 138 44.2
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 1.6e-24 116.7 138 44.2
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 1.6e-24 116.7 138 44.2
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 1.6e-24 116.7 138 47.1
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 2.0e-24 116.3 140 45.0
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 3.5e-24 115.5 138 44.2
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 4.5e-24 115.2 137 45.3
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 4.5e-24 115.2 136 44.1
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 2.2e-23 112.8 138 45.7
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 2.9e-23 112.5 138 42.8
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 3.8e-23 112.1 137 43.8
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 5.0e-23 111.7 138 42.0
Pp3c17_17380 Physcomitrium patens HOM05D000922 ORTHO05D008200 6.5e-23 111.3 138 41.3
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 8.5e-23 110.9 138 42.0
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 1.5e-22 110.2 138 43.5
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 1.9e-22 109.8 168 39.9
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 4.2e-22 108.6 95 57.9
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.2e-21 107.1 159 40.3
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 2.3e-20 102.8 96 51.0
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 3.0e-20 102.4 140 41.4
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 4.0e-20 102.1 125 44.0
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 5.2e-20 101.7 161 37.9
Cfa019117 Carpinus fangiana HOM05D000922 ORTHO05D008200 1.2e-19 100.5 111 46.8
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 9.8e-19 97.4 113 44.2
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 2.2e-18 96.3 95 48.4
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 2.8e-18 95.9 95 51.6
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 6.3e-18 94.7 89 52.8
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 1.6e-16 90.1 89 50.6
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 4.5e-16 88.6 89 50.6
EL10Ac5g12019 Beta vulgaris HOM05D000922 ORTHO05D008200 2.9e-15 85.9 112 42.0
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 2.9e-15 85.9 190 33.2
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 5.0e-15 85.1 83 48.2
arahy.Tifrunner.gnm1.ann1.PQAW0Q Arachis hypogaea HOM05D000922 ORTHO05D008200 8.6e-15 84.3 110 41.8
TPR.G37467 Trifolium pratense HOM05D000922 ORTHO05D008200 1.8e-12 76.6 110 38.2
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 1.3e-07 60.5 68 42.6


User provided reference genes

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