Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 7.6e-52 206.8 101 100.0
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 2.2e-30 135.6 100 59.0
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 9.0e-29 130.2 100 55.0
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 1.7e-27 125.9 101 53.5
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 1.7e-27 125.9 101 57.4
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 6.5e-27 124.0 101 53.5
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 8.5e-27 123.6 101 54.5
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 1.1e-26 123.2 101 57.4
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 1.1e-26 123.2 101 54.5
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 1.4e-26 122.9 101 52.5
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 1.9e-26 122.5 100 57.0
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 1.9e-26 122.5 101 56.4
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 1.9e-26 122.5 101 54.5
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 1.9e-26 122.5 101 54.5
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 1.9e-26 122.5 101 53.5
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 2.5e-26 122.1 101 54.5
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 2.5e-26 122.1 101 52.5
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 2.5e-26 122.1 101 52.5
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 2.5e-26 122.1 101 53.5
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 2.5e-26 122.1 101 53.5
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 2.5e-26 122.1 101 55.4
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 2.5e-26 122.1 101 56.4
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 2.5e-26 122.1 101 52.5
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 3.2e-26 121.7 101 52.5
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 4.2e-26 121.3 101 52.5
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 4.2e-26 121.3 101 52.5
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 4.2e-26 121.3 101 55.4
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 5.5e-26 120.9 101 54.5
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 5.5e-26 120.9 101 54.5
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 5.5e-26 120.9 101 51.5
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 5.5e-26 120.9 101 53.5
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 7.2e-26 120.6 101 53.5
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 7.2e-26 120.6 101 54.5
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 9.4e-26 120.2 101 53.5
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 9.4e-26 120.2 101 53.5
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 9.4e-26 120.2 100 56.0
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 1.2e-25 119.8 101 50.5
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 1.2e-25 119.8 101 52.5
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 1.6e-25 119.4 101 51.5
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 1.6e-25 119.4 101 51.5
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 1.6e-25 119.4 101 51.5
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 2.1e-25 119.0 100 53.0
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 2.1e-25 119.0 101 55.4
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 2.7e-25 118.6 101 50.5
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 2.7e-25 118.6 101 54.5
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 2.7e-25 118.6 101 53.5
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 2.7e-25 118.6 101 53.5
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 2.7e-25 118.6 101 53.5
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 3.6e-25 118.2 101 52.5
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 3.6e-25 118.2 101 53.5
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 4.6e-25 117.9 101 52.5
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 4.6e-25 117.9 98 52.0
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 6.1e-25 117.5 101 53.5
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 6.1e-25 117.5 101 51.5
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 7.9e-25 117.1 101 53.5
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 1.0e-24 116.7 102 54.9
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 1.0e-24 116.7 101 52.5
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 1.0e-24 116.7 101 53.5
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.4e-24 116.3 101 53.5
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 1.4e-24 116.3 101 51.5
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 1.4e-24 116.3 101 51.5
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 1.4e-24 116.3 101 52.5
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.8e-24 115.9 101 51.5
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 1.8e-24 115.9 101 54.5
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 2.3e-24 115.5 101 53.5
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 2.3e-24 115.5 101 53.5
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 3.0e-24 115.2 99 52.5
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 3.0e-24 115.2 101 50.5
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 3.0e-24 115.2 101 55.4
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 3.0e-24 115.2 101 51.5
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 3.0e-24 115.2 101 54.5
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 3.9e-24 114.8 101 52.5
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 5.1e-24 114.4 101 49.5
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 6.7e-24 114.0 102 52.9
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 6.7e-24 114.0 102 52.9
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 6.7e-24 114.0 102 52.9
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 6.7e-24 114.0 101 51.5
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 8.8e-24 113.6 102 52.9
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 8.8e-24 113.6 101 50.5
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 8.8e-24 113.6 101 52.5
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 8.8e-24 113.6 101 52.5
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 8.8e-24 113.6 95 52.6
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 8.8e-24 113.6 101 51.5
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 1.1e-23 113.2 101 52.5
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 1.1e-23 113.2 101 51.5
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 1.1e-23 113.2 101 51.5
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 1.1e-23 113.2 101 52.5
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 2.0e-23 112.5 101 51.5
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.5e-23 112.1 101 51.5
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 2.5e-23 112.1 101 49.5
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 3.3e-23 111.7 101 51.5
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 3.3e-23 111.7 101 53.5
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 3.3e-23 111.7 101 49.5
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 4.3e-23 111.3 101 49.5
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 5.7e-23 110.9 101 50.5
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 5.7e-23 110.9 102 51.0
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 7.4e-23 110.5 101 49.5
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 9.7e-23 110.2 101 47.5
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 2.2e-22 109.0 101 50.5
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 2.2e-22 109.0 102 52.0
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 2.2e-22 109.0 101 45.5
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 2.8e-22 108.6 101 51.5
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 6.3e-22 107.5 101 48.5
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 8.2e-22 107.1 101 50.5
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 9.1e-21 103.6 72 66.7
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 1.5e-20 102.8 71 67.6
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 3.4e-20 101.7 82 53.7
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 4.2e-18 94.7 135 39.3
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 4.2e-18 94.7 101 45.5
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.6e-17 92.8 101 44.6
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 2.2e-14 82.4 102 43.1
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 5.9e-12 74.3 101 37.6
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 4.4e-07 58.2 50 48.0
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 7.5e-07 57.4 50 46.0


User provided reference genes

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