Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO108G0005 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 3.0e-246 854.7 430 100.0
SMO108G0001 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 8.6e-246 853.2 430 99.8
SMO108G0003 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 2.1e-244 848.6 430 99.3
SMO108G0004 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 3.4e-226 788.1 434 94.0
SMO108G0002 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 2.6e-170 602.4 324 96.6
SMO259G0015 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 3.4e-117 426.0 324 75.0
SMO259G0051 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 3.2e-115 419.5 327 74.3
SMO313G0001 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 7.8e-114 414.8 327 73.7
SMO259G0021 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.4e-99 367.5 307 69.1
SMO259G0055 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 1.4e-86 324.3 222 79.3
SMO259G0038 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 7.1e-83 312.0 226 76.1
SMO259G0024 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 1.3e-76 291.2 158 94.3
SMO174G0204 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 3.6e-42 176.8 215 54.9
SMO259G0027 Selaginella moellendorffii HOM05D012679 ORTHO05D375777 4.7e-34 149.8 240 47.9
SEGI_10192 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 7.5e-32 142.5 258 37.6
SEGI_29510 Sequoiadendron giganteum HOM05D005051 ORTHO05D005945 7.5e-32 142.5 258 37.6
SMO248G0001 Selaginella moellendorffii HOM05D012679 ORTHO05D376469 2.9e-31 140.6 129 65.9
Oeu018495.2 Olea europaea HOM05D005051 ORTHO05D005945 4.1e-30 136.7 211 40.3
CDE05G0682 Ceratophyllum demersum HOM05D005051 ORTHO05D005945 4.6e-29 133.3 221 39.4
Lsat_1_v5_gn_8_89520 Lactuca sativa HOM05D005051 ORTHO05D005945 1.0e-28 132.1 224 38.8
Sc17g0002210 Simmondsia chinensis HOM05D005051 ORTHO05D005945 2.3e-28 131.0 236 41.5
FAN15G1450 Fragaria x ananassa HOM05D005051 ORTHO05D005945 2.9e-28 130.6 236 38.6
FAN27G0551 Fragaria x ananassa HOM05D005051 ORTHO05D005945 2.9e-28 130.6 236 38.6
Prupe.8G200800 Prunus persica HOM05D005051 ORTHO05D005945 2.9e-28 130.6 237 39.2
QL09p053053 Quercus lobata HOM05D005051 ORTHO05D005945 2.9e-28 130.6 234 39.3
Dinv19188 Davidia involucrata HOM05D005051 ORTHO05D005945 6.6e-28 129.4 241 36.5
FAN24G2416 Fragaria x ananassa HOM05D005051 ORTHO05D005945 8.6e-28 129.0 236 38.1
Cc01_g16860 Coffea canephora HOM05D005051 ORTHO05D005945 1.1e-27 128.6 255 37.3
FvH4_2g18730 Fragaria vesca HOM05D005051 ORTHO05D005945 1.1e-27 128.6 236 38.1
Oeu035785.1 Olea europaea HOM05D005051 ORTHO05D005945 1.5e-27 128.3 216 38.0
QL09p052190 Quercus lobata HOM05D005051 ORTHO05D005945 1.9e-27 127.9 231 39.4
vmacro02772 Vaccinium macrocarpon HOM05D005051 ORTHO05D005945 1.9e-27 127.9 232 39.7
AL3G18390 Arabidopsis lyrata HOM05D005051 ORTHO05D005945 2.5e-27 127.5 218 37.6
MD13G1217900 Malus domestica HOM05D005051 ORTHO05D005945 2.5e-27 127.5 228 37.7
Medtr8g013045 Medicago truncatula HOM05D005051 ORTHO05D005945 2.5e-27 127.5 231 39.8
Migut.D02493 Erythranthe guttata HOM05D005051 ORTHO05D005945 3.3e-27 127.1 249 36.5
GSVIVG01011065001 Vitis vinifera HOM05D005051 ORTHO05D005945 3.3e-27 127.1 210 39.5
Lj2A1128T45 Lonicera japonica HOM05D005051 ORTHO05D005945 4.3e-27 126.7 228 37.7
RcHm_v2.0_Chr6g0284351 Rosa chinensis HOM05D005051 ORTHO05D005945 5.6e-27 126.3 237 39.2
Aa31LG5G17700 Aethionema arabicum HOM05D005051 ORTHO05D005945 7.3e-27 125.9 224 38.4
CSS0047345 Camellia sinensis var. sinensis HOM05D005051 ORTHO05D005945 9.5e-27 125.6 259 36.7
THA.LOC104818965 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 9.5e-27 125.6 225 37.8
unitig_899.g15019 Utricularia gibba HOM05D005051 ORTHO05D005945 9.5e-27 125.6 221 37.1
Nitab4.5_0000045g0340 Nicotiana tabacum HOM05D005051 ORTHO05D005945 1.2e-26 125.2 242 38.0
Peaxi162Scf00398g00089 Petunia axillaris HOM05D005051 ORTHO05D005945 1.2e-26 125.2 230 37.0
SalBow6G3716 Salvia bowleyana HOM05D005051 ORTHO05D005945 1.2e-26 125.2 222 39.6
SGA_v2.0_scaffold171G38944 Striga asiatica HOM05D005051 ORTHO05D005945 1.2e-26 125.2 230 38.7
Carub.0003s0666 Capsella rubella HOM05D005051 ORTHO05D005945 1.6e-26 124.8 214 38.8
TAR365G1079 Trochodendron aralioides HOM05D005051 ORTHO05D005945 1.6e-26 124.8 241 37.8
Haze_24821 Corylus avellana HOM05D005051 ORTHO05D005945 2.1e-26 124.4 235 39.1
MELO3C021052.2 Cucumis melo HOM05D005051 ORTHO05D005945 2.1e-26 124.4 233 35.6
A05p41070 Brassica napus HOM05D005051 ORTHO05D005945 2.8e-26 124.0 218 39.4
Cfa002585 Carpinus fangiana HOM05D005051 ORTHO05D005945 2.8e-26 124.0 235 38.7
CiPaw.03G147700 Carya illinoinensis HOM05D005051 ORTHO05D005945 2.8e-26 124.0 229 39.3
COL.COLO4_15648 Corchorus olitorius HOM05D005051 ORTHO05D005945 2.8e-26 124.0 233 39.1
MD16G1223000 Malus domestica HOM05D005051 ORTHO05D005945 2.8e-26 124.0 230 37.4
Actinidia30063 Actinidia chinensis HOM05D005051 ORTHO05D005945 3.6e-26 123.6 273 36.3
PSO384G3368 Papaver somniferum HOM05D005051 ORTHO05D005945 4.7e-26 123.2 249 37.3
TPR.G17135 Trifolium pratense HOM05D005051 ORTHO05D005945 4.7e-26 123.2 230 38.3
CARHR081740 Cardamine hirsuta HOM05D005051 ORTHO05D005945 6.2e-26 122.9 218 36.7
Glyma.16G101100 Glycine max HOM05D005051 ORTHO05D005945 6.2e-26 122.9 254 35.8
AagrBONN_evm.TU.Sc2ySwM_368.938 Anthoceros agrestis HOM05D005051 ORTHO05D005945 8.0e-26 122.5 248 38.3
Ca_23236_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 8.0e-26 122.5 254 37.0
Ciclev10019161m.g Citrus clementina HOM05D005051 ORTHO05D005945 8.0e-26 122.5 239 36.4
CsaV3_7G026000 Cucumis sativus L. HOM05D005051 ORTHO05D005945 8.0e-26 122.5 239 34.7
Lalb_Chr13g0291091 Lupinus albus HOM05D005051 ORTHO05D005945 1.0e-25 122.1 253 38.3
Potri.014G190600 Populus trichocarpa HOM05D005051 ORTHO05D005945 1.0e-25 122.1 245 36.7
Sed0004391 Sechium edule HOM05D005051 ORTHO05D005945 1.0e-25 122.1 239 36.0
ECA236G0910 Erigeron canadensis HOM05D005051 ORTHO05D005945 1.4e-25 121.7 234 36.8
AT3G07140 Arabidopsis thaliana HOM05D005051 ORTHO05D005945 1.8e-25 121.3 218 36.2
DCAR_012658 Daucus carota HOM05D005051 ORTHO05D005945 1.8e-25 121.3 250 35.2
Thhalv10020265m.g Eutrema salsugineum HOM05D005051 ORTHO05D005945 1.8e-25 121.3 219 36.1
Phvul.010G020500 Phaseolus vulgaris HOM05D005051 ORTHO05D005945 1.8e-25 121.3 230 38.3
Sed0023522 Sechium edule HOM05D005051 ORTHO05D005945 1.8e-25 121.3 242 34.3
THA.LOC104802665 Tarenaya hassleriana HOM05D005051 ORTHO05D005945 1.8e-25 121.3 215 40.5
Ah.02g115620 Amaranthus hybridus HOM05D005051 ORTHO05D005945 2.3e-25 120.9 230 37.8
Glyma.03G064400 Glycine max HOM05D005051 ORTHO05D005945 2.3e-25 120.9 254 35.8
BraA05t22834Z Brassica rapa HOM05D005051 ORTHO05D005945 3.1e-25 120.6 218 38.5
Sp3g06080 Schrenkiella parvula HOM05D005051 ORTHO05D005945 3.1e-25 120.6 240 35.4
VMungo1309G1922 Vigna mungo HOM05D005051 ORTHO05D005945 3.1e-25 120.6 232 37.9
ATR0564G162 Amborella trichopoda HOM05D005051 ORTHO05D005945 4.0e-25 120.2 237 37.6
arahy.Tifrunner.gnm1.ann1.8DP3DE Arachis hypogaea HOM05D005051 ORTHO05D005945 4.0e-25 120.2 255 36.5
C05p60240 Brassica napus HOM05D005051 ORTHO05D005945 4.0e-25 120.2 216 37.0
BolC5t34674H Brassica oleracea HOM05D005051 ORTHO05D005945 4.0e-25 120.2 216 37.0
Aqoxy4G00040 Aquilegia oxysepala HOM05D005051 ORTHO05D005945 5.2e-25 119.8 226 37.2
BcaC05g29842 Brassica carinata HOM05D005051 ORTHO05D005945 5.2e-25 119.8 216 37.0
MSTRG.18843 Avicennia marina HOM05D005051 ORTHO05D005945 6.8e-25 119.4 249 33.7
SMO259G0053 Selaginella moellendorffii HOM05D012679 ORTHO05D378244 6.8e-25 119.4 134 59.7
HanXRQChr04g0108251 Helianthus annuus HOM05D005051 ORTHO05D005945 8.9e-25 119.0 248 33.9
PSO339G3208 Papaver somniferum HOM05D005051 ORTHO05D005945 8.9e-25 119.0 249 35.7
Psat4g199920 Pisum sativum HOM05D005051 ORTHO05D005945 1.2e-24 118.6 230 38.7
Sopen09g023140 Solanum pennellii HOM05D005051 ORTHO05D005945 1.2e-24 118.6 230 35.7
Mapoly0173s0012 Marchantia polymorpha HOM05D005051 ORTHO05D005945 1.5e-24 118.2 279 33.3
Nn2g14125 Nelumbo nucifera HOM05D005051 ORTHO05D005945 1.5e-24 118.2 233 38.2
Atru.chr6.1506 Acer truncatum HOM05D005051 ORTHO05D005945 2.0e-24 117.9 234 35.9
BcaC05g29752 Brassica carinata HOM05D005051 ORTHO05D005945 2.0e-24 117.9 228 35.5
ClCG09G008890 Citrullus lanatus HOM05D005051 ORTHO05D005945 2.0e-24 117.9 239 33.9
Gorai.001G188000 Gossypium raimondii HOM05D005051 ORTHO05D005945 2.0e-24 117.9 238 36.6
SMO229G0003 Selaginella moellendorffii HOM05D012679 ORTHO05D375076 2.0e-24 117.9 134 59.0
SMO229G0005 Selaginella moellendorffii HOM05D012679 ORTHO05D374820 2.0e-24 117.9 134 59.0
SMO229G0018 Selaginella moellendorffii HOM05D012679 ORTHO05D379110 2.0e-24 117.9 134 59.0
SMO229G0040 Selaginella moellendorffii HOM05D012679 ORTHO05D379409 2.0e-24 117.9 134 59.0
Lj3g0013392 Lotus japonicus HOM05D005051 ORTHO05D005945 2.6e-24 117.5 254 37.0
PGSC0003DMG400023098 Solanum tuberosum HOM05D005051 ORTHO05D005945 3.4e-24 117.1 230 36.1
Gohir.D07G164100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 4.4e-24 116.7 238 36.1
Sabra14G0142400 Salix brachista HOM05D005051 ORTHO05D005945 4.4e-24 116.7 252 36.1
Solyc09g059960.3 Solanum lycopersicum HOM05D005051 ORTHO05D005945 4.4e-24 116.7 230 35.7
Duzib138G1384 Durio zibethinus HOM05D005051 ORTHO05D005945 5.8e-24 116.3 258 35.7
AUR62008933 Chenopodium quinoa HOM05D005051 ORTHO05D005945 7.5e-24 115.9 231 37.2
Gohir.A07G158000 Gossypium hirsutum HOM05D005051 ORTHO05D005945 7.5e-24 115.9 232 37.5
CAN.G3.1 Capsicum annuum HOM05D005051 ORTHO05D005945 9.8e-24 115.5 230 35.2
Eucgr.E03305 Eucalyptus grandis HOM05D005051 ORTHO05D005945 1.3e-23 115.2 233 36.9
Medtr8g013050 Medicago truncatula HOM05D005051 ORTHO05D005945 1.3e-23 115.2 223 37.2
PGR083G2429 Punica granatum HOM05D005051 ORTHO05D005945 1.3e-23 115.2 254 33.9
arahy.Tifrunner.gnm1.ann1.SK15G6 Arachis hypogaea HOM05D005051 ORTHO05D005945 1.7e-23 114.8 255 35.3
EL10Ac7g17867 Beta vulgaris HOM05D005051 ORTHO05D005945 2.2e-23 114.4 227 36.1
Cpa.g.sc8.135 Carica papaya HOM05D005051 ORTHO05D005945 2.2e-23 114.4 230 38.3
Manes.13G046400 Manihot esculenta HOM05D005051 ORTHO05D005945 2.2e-23 114.4 237 36.7
AUR62001109 Chenopodium quinoa HOM05D005051 ORTHO05D005945 3.7e-23 113.6 232 37.1
Thecc.01G222800 Theobroma cacao HOM05D005051 ORTHO05D005945 3.7e-23 113.6 235 37.4
Gohir.A11G139100 Gossypium hirsutum HOM05D005051 ORTHO05D005945 4.9e-23 113.2 231 35.9
Hund18405 Selenicereus undatus HOM05D005051 ORTHO05D005945 8.3e-23 112.5 240 36.2
Duzib211G0096 Durio zibethinus HOM05D005051 ORTHO05D005945 2.4e-22 110.9 235 37.0
Gohir.D11G145300 Gossypium hirsutum HOM05D005051 ORTHO05D005945 5.4e-22 109.8 224 36.2
TWI36G0473 Tripterygium wilfordii HOM05D005051 ORTHO05D005945 7.0e-22 109.4 232 34.5
Zm00001eb269850 Zea mays HOM05D005051 ORTHO05D005945 2.7e-21 107.5 236 32.2
Pp3c21_19350 Physcomitrium patens HOM05D005051 ORTHO05D005945 1.3e-20 105.1 273 32.2
Ca_23237_v3 Cicer arietinum L. HOM05D005051 ORTHO05D005945 5.0e-20 103.2 155 42.6
SHI23570 Sapria himalayana HOM05D005051 ORTHO05D005945 5.0e-20 103.2 243 33.3
Gorai.007G155800 Gossypium raimondii HOM05D005051 ORTHO05D005945 7.3e-19 99.4 161 41.0
SMO229G0017 Selaginella moellendorffii HOM05D012679 ORTHO05D005945 2.6e-16 90.9 54 85.2
CBR_g44939 Chara braunii HOM05D005051 ORTHO05D005945 9.8e-16 89.0 183 33.9
Actinidia31469 Actinidia chinensis HOM05D005051 ORTHO05D005945 2.4e-14 84.3 118 44.9
SMO259G0028 Selaginella moellendorffii HOM05D005051 ORTHO05D005945 5.1e-12 76.6 45 86.7
COL.COLO4_36899 Corchorus olitorius HOM05D005051 ORTHO05D005945 5.6e-11 73.2 50 70.0
PRCOL_00003451 Prasinoderma coloniale HOM05D002267 ORTHO05D005902 6.2e-10 69.7 202 33.7
Medtr6g061260 Medicago truncatula HOM05D005051 ORTHO05D005945 1.4e-09 68.6 100 43.0
QL09p053462 Quercus lobata HOM05D005051 ORTHO05D005945 2.6e-08 64.3 149 34.2
Sp2g19120 Schrenkiella parvula HOM05D005051 ORTHO05D005945 3.2e-06 57.4 177 29.4


User provided reference genes

Program Settings