Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO089G0003 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 0.0e+00 2688.7 1341 100.0
SMO200G0222 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 0.0e+00 2256.5 1315 87.2
SMO200G0092 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 0.0e+00 2234.9 1318 84.7
SMO200G0268 Selaginella moellendorffii HOM05D009355 ORTHO05D000371 0.0e+00 2228.0 1317 84.9
SMO209G0006 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 0.0e+00 2215.7 1316 85.8
SMO200G0248 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 0.0e+00 2173.7 1315 85.4
SMO209G0011 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 0.0e+00 2055.4 1314 81.7
SMO200G0235 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 0.0e+00 2051.2 1237 85.1
SMO200G0015 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 0.0e+00 1906.7 1323 75.9
SMO089G0013 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 0.0e+00 1740.7 1087 82.2
SMO089G0010 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 0.0e+00 1666.0 1312 70.1
SMO200G0175 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 0.0e+00 1660.6 1313 68.2
SMO200G0009 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 0.0e+00 1323.9 1317 57.5
SMO232G0051 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 3.7e-194 683.3 524 68.1
SMO307G0057 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 2.9e-130 471.1 1192 31.9
SMO074G0001 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 4.1e-129 467.2 300 83.0
SMO089G0009 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 1.7e-119 435.3 678 43.5
SMO203G0126 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 1.2e-104 386.0 1153 30.3
SMO356G0140 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 6.7e-103 380.2 1009 28.7
SMO200G0156 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 1.1e-100 372.9 243 83.1
SMO290G0010 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 1.5e-99 369.0 997 29.3
SMO356G0720 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 2.0e-99 368.6 971 29.8
SMO217G0018 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 6.7e-87 327.0 1005 27.2
SMO239G0171 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 1.0e-79 303.1 1149 25.4
SMO235G0061 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 2.2e-58 232.3 518 32.0
Mapoly0093s0015 Marchantia polymorpha HOM05D003532 ORTHO05D022906 4.4e-30 138.3 1071 22.6
SMO089G0004 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 2.2e-29 136.0 83 88.0
Mapoly0143s0004 Marchantia polymorpha HOM05D011635 ORTHO05D022906 2.3e-26 125.9 520 25.0
Mapoly0225s0002 Marchantia polymorpha HOM05D003532 ORTHO05D022906 3.0e-26 125.6 908 21.4
Mapoly0182s0017 Marchantia polymorpha HOM05D003532 ORTHO05D003298 4.0e-23 115.2 688 21.1
CBR_g45627 Chara braunii HOM05D003532 ORTHO05D003298 5.2e-23 114.8 533 22.7
AagrBONN_evm.TU.Sc2ySwM_362.2762 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.5e-22 113.2 939 21.9
SMO356G0061 Selaginella moellendorffii HOM05D009355 ORTHO05D011581 5.8e-22 111.3 171 32.7
AagrBONN_evm.TU.Sc2ySwM_368.1056 Anthoceros agrestis HOM05D003532 ORTHO05D003298 3.7e-21 108.6 937 20.8
Mapoly0225s0001 Marchantia polymorpha HOM05D003532 ORTHO05D022906 2.4e-20 105.9 598 22.9
THA.LOC104811650 Tarenaya hassleriana HOM05D003532 ORTHO05D003298 3.2e-20 105.5 914 21.9
Potri.001G361200 Populus trichocarpa HOM05D003532 ORTHO05D003298 2.1e-19 102.8 906 22.2
Solyc03g112750.4 Solanum lycopersicum HOM05D003532 ORTHO05D003298 3.5e-19 102.1 854 21.7
Mapoly0129s0027 Marchantia polymorpha HOM05D011635 ORTHO05D022906 6.0e-19 101.3 579 22.6
Peaxi162Scf00568g00016 Petunia axillaris HOM05D003532 ORTHO05D003298 6.0e-19 101.3 912 20.7
CsaV3_7G018660 Cucumis sativus L. HOM05D003532 ORTHO05D003298 7.8e-19 100.9 842 21.7
Nn1g07430 Nelumbo nucifera HOM05D003532 ORTHO05D003298 7.8e-19 100.9 939 20.9
CBR_g46414 Chara braunii HOM05D003532 ORTHO05D003298 1.7e-18 99.8 640 22.5
PSO210G6712 Papaver somniferum HOM05D003532 ORTHO05D003298 1.7e-18 99.8 865 21.8
CBR_g38597 Chara braunii HOM05D003532 ORTHO05D003298 6.6e-18 97.8 717 23.2
CBR_g38599 Chara braunii HOM05D003532 ORTHO05D003298 8.6e-18 97.4 546 24.5
AagrBONN_evm.TU.Sc2ySwM_362.556 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.9e-17 96.3 579 22.5
Mapoly0007s0136 Marchantia polymorpha HOM05D005435 ORTHO05D007370 3.3e-17 95.5 1085 20.3
CBR_g57789 Chara braunii HOM05D003532 ORTHO05D003298 5.6e-17 94.7 732 22.4
Mapoly0121s0012 Marchantia polymorpha HOM05D011635 ORTHO05D022906 9.5e-17 94.0 333 25.5
AagrBONN_evm.TU.Sc2ySwM_368.330 Anthoceros agrestis HOM05D002844 ORTHO05D003298 1.2e-16 93.6 624 24.0
Mapoly0072s0037 Marchantia polymorpha HOM05D003532 ORTHO05D003298 1.6e-16 93.2 612 23.4
AagrBONN_evm.TU.Sc2ySwM_368.290 Anthoceros agrestis HOM05D002844 ORTHO05D003298 4.7e-16 91.7 588 21.6
AagrBONN_evm.TU.Sc2ySwM_344.5368 Anthoceros agrestis HOM05D003532 ORTHO05D003298 6.2e-16 91.3 564 21.6
AagrBONN_evm.TU.Sc2ySwM_117.4056 Anthoceros agrestis HOM05D002844 ORTHO05D003298 1.4e-15 90.1 685 21.2
AagrBONN_evm.TU.Sc2ySwM_340.760 Anthoceros agrestis HOM05D008597 ORTHO05D003298 3.1e-15 89.0 489 21.7
AagrBONN_evm.TU.Sc2ySwM_362.1906 Anthoceros agrestis HOM05D003532 ORTHO05D003298 4.0e-15 88.6 475 21.5
AagrBONN_evm.TU.Sc2ySwM_362.1938 Anthoceros agrestis HOM05D003532 ORTHO05D003298 6.8e-15 87.8 451 21.5
AagrBONN_evm.TU.Sc2ySwM_368.199 Anthoceros agrestis HOM05D002844 ORTHO05D003298 8.9e-15 87.4 540 23.0
Mapoly0002s0170 Marchantia polymorpha HOM05D003532 ORTHO05D003298 1.5e-14 86.7 653 20.7
MBI19_g37319_MAGBIO Magnolia biondii HOM05D003532 ORTHO05D003298 2.6e-14 85.9 461 24.5
AagrBONN_evm.TU.Sc2ySwM_368.287 Anthoceros agrestis HOM05D002844 ORTHO05D003298 4.4e-14 85.1 476 21.8
AagrBONN_evm.TU.Sc2ySwM_340.449 Anthoceros agrestis HOM05D002844 ORTHO05D003298 5.8e-14 84.7 523 22.9
AagrBONN_evm.TU.Sc2ySwM_362.1738 Anthoceros agrestis HOM05D003532 ORTHO05D003298 5.8e-14 84.7 479 21.5
Mapoly0069s0085 Marchantia polymorpha HOM05D003532 ORTHO05D003298 5.8e-14 84.7 531 22.2
AagrBONN_evm.TU.Sc2ySwM_362.460 Anthoceros agrestis HOM05D002844 ORTHO05D003298 1.3e-13 83.6 475 23.4
Pp3c10_20720 Physcomitrium patens HOM05D003532 ORTHO05D003298 1.1e-12 80.5 368 25.0
ATR0712G118 Amborella trichopoda HOM05D003532 ORTHO05D003298 1.4e-12 80.1 860 19.4
AagrBONN_evm.TU.Sc2ySwM_362.2132 Anthoceros agrestis HOM05D003532 ORTHO05D003298 1.9e-12 79.7 458 21.8
Pp3c3_24130 Physcomitrium patens HOM05D003532 ORTHO05D003298 2.4e-12 79.3 349 24.6
Mapoly0033s0171 Marchantia polymorpha HOM05D003532 ORTHO05D003298 5.4e-12 78.2 383 23.8
CBR_g40961 Chara braunii HOM05D003532 ORTHO05D000353 1.6e-11 76.6 672 20.7
AagrBONN_evm.TU.Sc2ySwM_362.2176 Anthoceros agrestis HOM05D003532 ORTHO05D003298 7.8e-11 74.3 302 24.5
Nitab4.5_0002423g0060 Nicotiana tabacum HOM05D003532 ORTHO05D003298 1.7e-10 73.2 318 24.8
AagrBONN_evm.TU.Sc2ySwM_340.453 Anthoceros agrestis HOM05D002844 ORTHO05D003298 3.9e-10 72.0 288 24.7
AagrBONN_evm.TU.Sc2ySwM_362.264 Anthoceros agrestis HOM05D002844 ORTHO05D010627 3.9e-10 72.0 228 28.1
CBR_g12865 Chara braunii HOM05D003532 ORTHO05D003298 9.0e-07 60.8 312 22.4
AagrBONN_evm.TU.Sc2ySwM_340.445 Anthoceros agrestis HOM05D002844 ORTHO05D010627 2.0e-06 59.7 192 26.6
AagrBONN_evm.TU.Sc2ySwM_117.2267 Anthoceros agrestis HOM05D002844 ORTHO05D010627 3.4e-06 58.9 157 28.0
AagrBONN_evm.TU.Sc2ySwM_368.232 Anthoceros agrestis HOM05D002844 ORTHO05D003298 7.6e-06 57.8 152 25.7


User provided reference genes

Program Settings