Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO086G0055 Selaginella moellendorffii HOM05D002824 ORTHO05D007162 3.7e-70 268.1 134 100.0
SEGI_33981 Sequoiadendron giganteum HOM05D002824 ORTHO05D007162 6.6e-27 124.4 132 51.5
BraSC58t46441Z Brassica rapa HOM05D002824 ORTHO05D007162 5.2e-24 114.8 134 46.3
Nn021s41522 Nelumbo nucifera HOM05D002824 ORTHO05D007162 5.2e-24 114.8 132 46.2
CAN.G1595.2 Capsicum annuum HOM05D002824 ORTHO05D007162 1.2e-23 113.6 134 49.3
Solyc00g500031.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 1.2e-23 113.6 134 49.3
Solyc00g500076.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 1.2e-23 113.6 134 49.3
TAR375G0295 Trochodendron aralioides HOM05D002824 ORTHO05D007162 1.2e-23 113.6 132 46.2
PGR111G0083 Punica granatum HOM05D002824 ORTHO05D007162 1.5e-23 113.2 134 46.3
Gohir.1Z050134 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.0e-23 112.8 136 47.8
PSO548G0051 Papaver somniferum HOM05D002824 ORTHO05D007162 2.0e-23 112.8 132 46.2
BolSC29t60529H Brassica oleracea HOM05D002824 ORTHO05D007162 3.4e-23 112.1 134 45.5
BolSC29t60610H Brassica oleracea HOM05D002824 ORTHO05D007162 3.4e-23 112.1 134 45.5
BolSC35t60729H Brassica oleracea HOM05D002824 ORTHO05D007162 3.4e-23 112.1 134 45.5
BraSC103t45445Z Brassica rapa HOM05D002824 ORTHO05D007162 3.4e-23 112.1 134 45.5
BraSC138t45553Z Brassica rapa HOM05D002824 ORTHO05D007162 3.4e-23 112.1 134 45.5
DCAR_032521 Daucus carota HOM05D002824 ORTHO05D007162 4.4e-23 111.7 134 47.8
AL2G20560 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 5.8e-23 111.3 134 45.5
AL2G21720 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 5.8e-23 111.3 134 45.5
ATCG00770 Arabidopsis thaliana HOM05D002824 ORTHO05D007162 5.8e-23 111.3 134 45.5
BNapus_Darmor_BZH_scaffold_253p00350 Brassica napus HOM05D002824 ORTHO05D007162 5.8e-23 111.3 134 45.5
CARHR282250 Cardamine hirsuta HOM05D002824 ORTHO05D007162 7.5e-23 110.9 134 44.8
Cpa.g.sc0.196 Carica papaya HOM05D002824 ORTHO05D007162 9.8e-23 110.5 129 48.1
BNapus_Darmor_BZH_scaffold_287p00270 Brassica napus HOM05D002824 ORTHO05D007162 1.3e-22 110.2 134 45.5
HanXRQChr00c0394g0574541 Helianthus annuus HOM05D002824 ORTHO05D007162 1.7e-22 109.8 134 45.5
HanXRQChr01g0020211 Helianthus annuus HOM05D002824 ORTHO05D007162 1.7e-22 109.8 134 45.5
HanXRQChr10g0284391 Helianthus annuus HOM05D002824 ORTHO05D007162 1.7e-22 109.8 134 45.5
HanXRQChr10g0318051 Helianthus annuus HOM05D002824 ORTHO05D007162 1.7e-22 109.8 134 45.5
HanXRQChr11g0326971 Helianthus annuus HOM05D002824 ORTHO05D007162 1.7e-22 109.8 134 45.5
HanXRQChr12g0369861 Helianthus annuus HOM05D002824 ORTHO05D007162 1.7e-22 109.8 134 45.5
HanXRQCPg0580191 Helianthus annuus HOM05D002824 ORTHO05D007162 1.7e-22 109.8 134 45.5
HanXRQChr17g0554561 Helianthus annuus HOM05D002824 ORTHO05D007162 2.9e-22 109.0 134 45.5
Gohir.A12G024800 Gossypium hirsutum HOM05D002824 ORTHO05D007162 3.7e-22 108.6 136 46.3
CAN.G327.20 Capsicum annuum HOM05D002824 ORTHO05D007162 4.9e-22 108.2 134 47.8
RcHm_v2.0_CPg0501871 Rosa chinensis HOM05D002824 ORTHO05D007162 8.3e-22 107.5 136 44.9
C02p60170 Brassica napus HOM05D002824 ORTHO05D007162 1.1e-21 107.1 134 44.0
Migut.D01328 Erythranthe guttata HOM05D002824 ORTHO05D007162 1.9e-21 106.3 134 47.0
Lalb_Chr25g0283371 Lupinus albus HOM05D002824 ORTHO05D007162 1.9e-21 106.3 134 45.5
Gohir.A06G056900 Gossypium hirsutum HOM05D002824 ORTHO05D007162 3.2e-21 105.5 136 45.6
ClCG00G003160 Citrullus lanatus HOM05D002824 ORTHO05D007162 1.2e-20 103.6 130 44.6
Lalb_Chr03g0039321 Lupinus albus HOM05D002824 ORTHO05D007162 1.6e-20 103.2 134 44.8
LjContig00319g0012184 Lotus japonicus HOM05D000964 ORTHO05D004047 3.5e-20 102.1 130 46.2
LjContig00319g0026138 Lotus japonicus HOM05D000964 ORTHO05D004047 3.5e-20 102.1 130 46.2
Gohir.A05G396400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 6.0e-20 101.3 114 49.1
Peaxi162Scf00299g00114 Petunia axillaris HOM05D002824 ORTHO05D007162 7.8e-20 100.9 125 49.6
Hund04057 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund08802 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund12527 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund19320 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund27962 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund27985 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund28109 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund28268 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund28459 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund28519 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund28529 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund28632 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund28678 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund28746 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund28759 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund28778 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund28846 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund29022 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund29036 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund29164 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund29217 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund29505 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund29525 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund29537 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund29554 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund29593 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund29605 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund29612 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund29682 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund30031 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund30272 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund30490 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund30495 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund30544 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Hund31501 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.7e-19 99.8 129 45.0
Gohir.D11G307000 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.1e-18 97.1 117 46.2
Lalb_Chr23g0274241 Lupinus albus HOM05D002824 ORTHO05D007162 1.5e-18 96.7 134 43.3
Lsat_1_v5_gn_1_116300 Lactuca sativa HOM05D002824 ORTHO05D007162 3.3e-18 95.5 127 43.3
Hund27578 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.3e-18 95.1 127 44.1
BraA06t25384Z Brassica rapa HOM05D002824 ORTHO05D007162 5.6e-18 94.7 123 44.7
HanXRQChr11g0345281 Helianthus annuus HOM05D002824 ORTHO05D007162 2.1e-17 92.8 115 44.3
Medtr4g034810 Medicago truncatula HOM05D002824 ORTHO05D007162 2.1e-17 92.8 116 48.3
Gohir.D01G102138 Gossypium hirsutum HOM05D002824 ORTHO05D007162 8.1e-17 90.9 119 47.1
Medtr4g059910 Medicago truncatula HOM05D002824 ORTHO05D007162 2.3e-16 89.4 104 47.1
LjContig00318g0002732 Lotus japonicus HOM05D002824 ORTHO05D007162 6.8e-16 87.8 134 40.3
BolC9t57548H Brassica oleracea HOM05D002824 ORTHO05D007162 9.9e-15 84.0 117 42.7
HanXRQChr00c0925g0577901 Helianthus annuus HOM05D002824 ORTHO05D007162 3.2e-13 79.0 113 42.5
Gohir.D03G105400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.1e-13 78.6 119 43.7
Hund29957 Selenicereus undatus HOM05D002824 ORTHO05D007162 7.1e-13 77.8 115 40.9
Gorai.003G111500 Gossypium raimondii HOM05D002824 ORTHO05D007162 9.2e-13 77.4 119 42.9
Gohir.A12G228400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.6e-12 75.1 89 49.4
Gohir.D08G062280 Gossypium hirsutum HOM05D002824 ORTHO05D007162 3.0e-11 72.4 132 34.1
Gorai.005G065900 Gossypium raimondii HOM05D002824 ORTHO05D007162 3.9e-11 72.0 98 45.9
Eucgr.E03558 Eucalyptus grandis HOM05D002824 ORTHO05D007162 3.3e-10 68.9 93 44.1
Hund30069 Selenicereus undatus HOM05D002824 ORTHO05D008771 1.1e-08 63.9 60 50.0
Nitab4.5_0011882g0040 Nicotiana tabacum HOM05D002824 ORTHO05D007162 2.0e-07 59.7 82 45.1
BolC7t41708H Brassica oleracea HOM05D002824 ORTHO05D007162 9.9e-07 57.4 90 40.0
GSVIVG01014320001 Vitis vinifera HOM05D002824 ORTHO05D007162 2.2e-06 56.2 93 43.0
Gohir.D08G194656 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.9e-06 55.1 132 31.1


User provided reference genes

Program Settings