Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO086G0034 Selaginella moellendorffii HOM05D007755 ORTHO05D009866 1.6e-25 118.6 61 100.0
HanXRQChr00c0272g0573011 Helianthus annuus HOM05D007755 ORTHO05D009866 4.6e-12 73.9 61 68.9
HanXRQChr00c0300g0573261 Helianthus annuus HOM05D007755 ORTHO05D009866 4.6e-12 73.9 61 68.9
HanXRQChr00c0313g0573411 Helianthus annuus HOM05D007755 ORTHO05D009866 4.6e-12 73.9 61 68.9
HanXRQChr00c0920g0577881 Helianthus annuus HOM05D007755 ORTHO05D009866 4.6e-12 73.9 61 68.9
HanXRQChr02g0041661 Helianthus annuus HOM05D007755 ORTHO05D009866 4.6e-12 73.9 61 68.9
HanXRQChr02g0044811 Helianthus annuus HOM05D007755 ORTHO05D009866 4.6e-12 73.9 61 68.9
HanXRQChr04g0099331 Helianthus annuus HOM05D007755 ORTHO05D009866 4.6e-12 73.9 61 68.9
HanXRQChr07g0201081 Helianthus annuus HOM05D007755 ORTHO05D009866 4.6e-12 73.9 61 68.9
HanXRQChr08g0210241 Helianthus annuus HOM05D007755 ORTHO05D009866 4.6e-12 73.9 61 68.9
HanXRQChr10g0282461 Helianthus annuus HOM05D007755 ORTHO05D009866 4.6e-12 73.9 61 68.9
HanXRQChr11g0326681 Helianthus annuus HOM05D007755 ORTHO05D009866 4.6e-12 73.9 61 68.9
HanXRQCPg0579881 Helianthus annuus HOM05D007755 ORTHO05D009866 4.6e-12 73.9 61 68.9
Glyma.01G095900 Glycine max HOM05D007755 ORTHO05D009866 7.9e-12 73.2 61 67.2
Medtr8g056780 Medicago truncatula HOM05D007755 ORTHO05D009866 7.9e-12 73.2 61 68.9
DCAR_032481 Daucus carota HOM05D007755 ORTHO05D009866 1.0e-11 72.8 61 67.2
CAN.G679.8 Capsicum annuum HOM05D007755 ORTHO05D009866 1.4e-11 72.4 61 67.2
HanXRQChr05g0151401 Helianthus annuus HOM05D007755 ORTHO05D009866 1.4e-11 72.4 61 67.2
PGR111G0111 Punica granatum HOM05D007755 ORTHO05D009866 1.4e-11 72.4 61 68.9
Solyc01g102770.1 Solanum lycopersicum HOM05D007755 ORTHO05D009866 1.4e-11 72.4 61 67.2
LjContig00489g0017505 Lotus japonicus HOM05D007755 ORTHO05D009866 3.0e-11 71.2 61 65.6
Potri.013G142548 Populus trichocarpa HOM05D007755 ORTHO05D009866 3.0e-11 71.2 61 67.2
Nn020s41507 Nelumbo nucifera HOM05D007755 ORTHO05D009866 3.9e-11 70.9 61 67.2
Nn082s42679 Nelumbo nucifera HOM05D007755 ORTHO05D009866 3.9e-11 70.9 61 67.2
Nn287s46147 Nelumbo nucifera HOM05D007755 ORTHO05D009866 3.9e-11 70.9 61 67.2
Nn3g19094 Nelumbo nucifera HOM05D007755 ORTHO05D009866 3.9e-11 70.9 61 67.2
AL2G20820 Arabidopsis lyrata HOM05D007755 ORTHO05D009866 5.1e-11 70.5 61 67.2
AL2G21330 Arabidopsis lyrata HOM05D007755 ORTHO05D009866 5.1e-11 70.5 61 67.2
ATCG00300 Arabidopsis thaliana HOM05D007755 ORTHO05D009866 5.1e-11 70.5 61 67.2
A06p23320 Brassica napus HOM05D007755 ORTHO05D009866 5.1e-11 70.5 61 67.2
BNapus_Darmor_BZH_scaffold_287p00020 Brassica napus HOM05D007755 ORTHO05D009866 5.1e-11 70.5 61 67.2
C09p40450 Brassica napus HOM05D007755 ORTHO05D009866 5.1e-11 70.5 61 67.2
BolC7t41728H Brassica oleracea HOM05D007755 ORTHO05D009866 5.1e-11 70.5 61 67.2
BolC9t56908H Brassica oleracea HOM05D007755 ORTHO05D009866 5.1e-11 70.5 61 67.2
BolSC29t60454H Brassica oleracea HOM05D007755 ORTHO05D009866 5.1e-11 70.5 61 67.2
BolSC45t60871H Brassica oleracea HOM05D007755 ORTHO05D009866 5.1e-11 70.5 61 67.2
BolSC47t61109H Brassica oleracea HOM05D007755 ORTHO05D009866 5.1e-11 70.5 61 67.2
BolSC47t61113H Brassica oleracea HOM05D007755 ORTHO05D009866 5.1e-11 70.5 61 67.2
BraA06t25434Z Brassica rapa HOM05D007755 ORTHO05D009866 5.1e-11 70.5 61 67.2
BraSC140t45582Z Brassica rapa HOM05D007755 ORTHO05D009866 5.1e-11 70.5 61 67.2
CARHR281980 Cardamine hirsuta HOM05D007755 ORTHO05D009866 5.1e-11 70.5 61 67.2
Migut.J01358 Erythranthe guttata HOM05D007755 ORTHO05D009866 6.7e-11 70.1 61 65.6
LjContig00318g0015447 Lotus japonicus HOM05D007755 ORTHO05D009866 6.7e-11 70.1 61 67.2
RcHm_v2.0_Chr3g0491831 Rosa chinensis HOM05D007755 ORTHO05D009866 6.7e-11 70.1 61 65.6
RcHm_v2.0_CPg0502301 Rosa chinensis HOM05D007755 ORTHO05D009866 6.7e-11 70.1 61 65.6
Migut.D01347 Erythranthe guttata HOM05D007755 ORTHO05D009866 8.8e-11 69.7 57 68.4
Gohir.D06G164048 Gossypium hirsutum HOM05D007755 ORTHO05D009866 8.8e-11 69.7 61 65.6
Gohir.D08G128420 Gossypium hirsutum HOM05D007755 ORTHO05D009866 8.8e-11 69.7 61 65.6
Hma1.2p1_0149F.1_g066480 Hydrangea macrophylla HOM05D007755 ORTHO05D009866 8.8e-11 69.7 61 65.6
Phvul.010G069000 Phaseolus vulgaris HOM05D007755 ORTHO05D009866 1.1e-10 69.3 61 60.7
Sed0002727 Sechium edule HOM05D007755 ORTHO05D009866 1.1e-10 69.3 61 65.6
Sed0008331 Sechium edule HOM05D007755 ORTHO05D009866 1.1e-10 69.3 61 65.6
Sed0012017 Sechium edule HOM05D007755 ORTHO05D009866 1.1e-10 69.3 61 65.6
Sed0014140 Sechium edule HOM05D007755 ORTHO05D009866 1.1e-10 69.3 61 65.6
Sed0021343 Sechium edule HOM05D007755 ORTHO05D009866 1.1e-10 69.3 61 65.6
Sed0024615 Sechium edule HOM05D007755 ORTHO05D009866 1.1e-10 69.3 61 65.6
Gohir.1Z049880 Gossypium hirsutum HOM05D007755 ORTHO05D009866 2.0e-10 68.6 61 63.9
Prupe.2G104500 Prunus persica HOM05D007755 ORTHO05D009866 2.0e-10 68.6 61 63.9
Solyc11g050770.1 Solanum lycopersicum HOM05D007755 ORTHO05D009866 2.6e-10 68.2 61 62.3
HanXRQChr11g0330571 Helianthus annuus HOM05D007755 ORTHO05D009866 3.3e-10 67.8 61 65.6
BraSC179t45795Z Brassica rapa HOM05D007755 ORTHO05D009866 4.4e-10 67.4 61 65.6
Gohir.A05G086100 Gossypium hirsutum HOM05D007755 ORTHO05D009866 4.4e-10 67.4 61 63.9
PSO548G0042 Papaver somniferum HOM05D007755 ORTHO05D009866 5.7e-10 67.0 61 65.6
Gohir.A12G076900 Gossypium hirsutum HOM05D007755 ORTHO05D009866 9.7e-10 66.2 61 63.9
Gohir.A12G121501 Gossypium hirsutum HOM05D007755 ORTHO05D009866 1.3e-09 65.9 61 62.3
Solyc10g017950.2 Solanum lycopersicum HOM05D007755 ORTHO05D009866 1.3e-09 65.9 61 63.9
MD11G1068400 Malus domestica HOM05D007755 ORTHO05D009866 2.2e-09 65.1 61 60.7
Glyma.08G363500 Glycine max HOM05D007755 ORTHO05D009866 3.7e-09 64.3 60 60.0
BolSC44t60853H Brassica oleracea HOM05D007755 ORTHO05D009866 6.3e-09 63.5 53 66.0
BolSC49t61194H Brassica oleracea HOM05D007755 ORTHO05D009866 6.3e-09 63.5 53 66.0
CAN.G201.1 Capsicum annuum HOM05D007755 ORTHO05D009866 6.3e-09 63.5 61 60.7
Gohir.A01G164800 Gossypium hirsutum HOM05D007755 ORTHO05D009866 3.1e-08 61.2 61 59.0
Migut.M00584 Erythranthe guttata HOM05D007755 ORTHO05D009866 6.9e-08 60.1 55 63.6
Nn2g13213 Nelumbo nucifera HOM05D007755 ORTHO05D009866 6.9e-08 60.1 43 69.8
Eucgr.B02051 Eucalyptus grandis HOM05D007755 ORTHO05D009866 1.5e-07 58.9 61 57.4
EL10As15g24140 Beta vulgaris HOM05D000890 ORTHO05D009866 2.0e-07 58.5 57 59.6
Thhalv10011069m.g Eutrema salsugineum HOM05D007755 ORTHO05D009866 4.5e-07 57.4 53 62.3
Gorai.003G070800 Gossypium raimondii HOM05D007755 ORTHO05D009866 7.7e-07 56.6 61 52.5
BraSC143t45685Z Brassica rapa HOM05D007755 ORTHO05D009866 8.5e-06 53.1 42 71.4


User provided reference genes

Program Settings