Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO032G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 9.7e-80 300.1 149 100.0
SMO183G0003 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 5.4e-62 241.1 142 87.3
SMO274G0023 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 3.5e-61 238.4 149 83.2
SMO212G0008 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 3.3e-51 205.3 149 74.5
SMO122G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.1e-50 202.6 131 81.7
SMO077G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.1e-49 200.3 127 81.9
SMO202G0002 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 4.0e-49 198.4 190 59.5
SMO274G0001 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 4.6e-45 184.9 153 69.3
SMO077G0009 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 2.4e-38 162.5 131 71.0
SMO274G0026 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 4.4e-32 141.7 96 78.1
SMO240G0047 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 1.4e-30 136.7 132 59.8
SMO286G0020 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 3.5e-29 132.1 84 78.6
SMO117G0311 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 3.9e-28 128.6 81 82.7
SMO274G0004 Selaginella moellendorffii HOM05D004701 ORTHO05D005220 4.9e-23 111.7 100 65.0
CsaV3_1G002500 Cucumis sativus L. HOM05D004701 ORTHO05D005220 5.6e-19 98.2 173 36.4
Sed0001989 Sechium edule HOM05D004701 ORTHO05D005220 9.6e-19 97.4 173 36.4
Duzib068G0813 Durio zibethinus HOM05D004701 ORTHO05D005220 8.1e-18 94.4 175 36.0
Duzib205G0738 Durio zibethinus HOM05D004701 ORTHO05D005220 1.4e-17 93.6 175 34.9
MELO3C017186.2 Cucumis melo HOM05D004701 ORTHO05D005220 3.1e-17 92.4 173 35.3
Thecc.03G092900 Theobroma cacao HOM05D004701 ORTHO05D005220 4.0e-17 92.0 175 34.3
ClCG06G016050 Citrullus lanatus HOM05D004701 ORTHO05D005220 5.3e-17 91.7 161 40.4
Gohir.A03G067500 Gossypium hirsutum HOM05D004701 ORTHO05D005220 5.3e-17 91.7 175 34.9
Gohir.D03G094000 Gossypium hirsutum HOM05D004701 ORTHO05D005220 5.3e-17 91.7 175 34.9
Gorai.003G098100 Gossypium raimondii HOM05D004701 ORTHO05D005220 5.3e-17 91.7 175 34.9
Actinidia04876 Actinidia chinensis HOM05D004701 ORTHO05D005220 9.0e-17 90.9 171 35.1
arahy.Tifrunner.gnm1.ann1.UQ68S4 Arachis hypogaea HOM05D004701 ORTHO05D005220 2.0e-16 89.7 161 37.9
Mapoly0021s0150 Marchantia polymorpha HOM05D004701 ORTHO05D005220 2.0e-16 89.7 175 33.1
CiPaw.12G011900 Carya illinoinensis HOM05D004701 ORTHO05D005220 9.9e-16 87.4 173 35.8
Lj1g0024661 Lotus japonicus HOM05D004701 ORTHO05D005220 9.9e-16 87.4 175 36.0
Os07g0632600 Oryza sativa ssp. japonica HOM05D004701 ORTHO05D005220 9.9e-16 87.4 170 34.7
AUR62021651 Chenopodium quinoa HOM05D004701 ORTHO05D005220 1.3e-15 87.0 149 36.9
Dinv38737 Davidia involucrata HOM05D004701 ORTHO05D005220 1.3e-15 87.0 173 34.1
TWI81G0545 Tripterygium wilfordii HOM05D004701 ORTHO05D005220 1.7e-15 86.7 175 34.9
TAR629G3124 Trochodendron aralioides HOM05D004701 ORTHO05D005220 2.2e-15 86.3 173 34.7
Cfa018922 Carpinus fangiana HOM05D004701 ORTHO05D005220 2.9e-15 85.9 175 34.9
Ciclev10019092m.g Citrus clementina HOM05D004701 ORTHO05D005220 2.9e-15 85.9 96 46.9
ATR0564G073 Amborella trichopoda HOM05D004701 ORTHO05D005220 3.8e-15 85.5 176 35.8
AagrBONN_evm.TU.Sc2ySwM_344.3797 Anthoceros agrestis HOM05D004701 ORTHO05D005220 4.9e-15 85.1 171 34.5
CSS0010493 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 4.9e-15 85.1 159 36.5
CANSAT80G1745 Cannabis sativa HOM05D004701 ORTHO05D005220 4.9e-15 85.1 175 34.3
Rhsim08G0152800 Rhododendron simsii HOM05D004701 ORTHO05D005220 4.9e-15 85.1 190 33.7
PSO832G0806 Papaver somniferum HOM05D004701 ORTHO05D005220 6.4e-15 84.7 101 45.5
Potri.017G112200 Populus trichocarpa HOM05D004701 ORTHO05D005220 8.4e-15 84.3 103 42.7
Atru.chr9.198 Acer truncatum HOM05D004701 ORTHO05D005220 1.1e-14 84.0 171 34.5
FAN13G1597 Fragaria x ananassa HOM05D004701 ORTHO05D005220 1.1e-14 84.0 174 35.1
Zm00001eb110080 Zea mays HOM05D004701 ORTHO05D005220 1.1e-14 84.0 181 33.1
Eucgr.B00530 Eucalyptus grandis HOM05D004701 ORTHO05D005220 1.4e-14 83.6 175 34.9
Lalb_Chr08g0235571 Lupinus albus HOM05D004701 ORTHO05D005220 1.4e-14 83.6 175 33.1
PSO063G2323 Papaver somniferum HOM05D004701 ORTHO05D005220 1.4e-14 83.6 101 45.5
Sabra17G0093000 Salix brachista HOM05D004701 ORTHO05D005220 1.4e-14 83.6 99 43.4
Ah.11g048260 Amaranthus hybridus HOM05D004701 ORTHO05D005220 1.9e-14 83.2 95 44.2
Hund02633 Selenicereus undatus HOM05D004701 ORTHO05D005220 2.4e-14 82.8 95 43.2
arahy.Tifrunner.gnm1.ann1.00I77L Arachis hypogaea HOM05D004701 ORTHO05D005220 3.2e-14 82.4 175 34.9
Glyma.06G195700 Glycine max HOM05D004701 ORTHO05D005220 3.2e-14 82.4 175 34.3
Nn4g23237 Nelumbo nucifera HOM05D004701 ORTHO05D005220 3.2e-14 82.4 99 44.4
Prupe.5G196200 Prunus persica HOM05D004701 ORTHO05D005220 3.2e-14 82.4 175 34.3
CSS0005828 Camellia sinensis var. sinensis HOM05D004701 ORTHO05D005220 4.2e-14 82.0 173 32.9
Aqoxy3G03462 Aquilegia oxysepala HOM05D004701 ORTHO05D005220 7.1e-14 81.3 171 35.7
QL10p017494 Quercus lobata HOM05D004701 ORTHO05D005220 7.1e-14 81.3 173 32.4
GSVIVG01007980001 Vitis vinifera HOM05D004701 ORTHO05D005220 7.1e-14 81.3 173 34.1
PGR083G0417 Punica granatum HOM05D004701 ORTHO05D005220 9.3e-14 80.9 173 33.5
THA.LOC104808258 Tarenaya hassleriana HOM05D004701 ORTHO05D005220 1.2e-13 80.5 172 36.0
EL10Ac5g11047 Beta vulgaris HOM05D004701 ORTHO05D005220 1.6e-13 80.1 150 35.3
Manes.14G080700 Manihot esculenta HOM05D004701 ORTHO05D005220 1.6e-13 80.1 171 34.5
Migut.I00201 Erythranthe guttata HOM05D004701 ORTHO05D005220 2.1e-13 79.7 93 45.2
Psat5g195480 Pisum sativum HOM05D004701 ORTHO05D005220 4.6e-13 78.6 175 33.1
CAN.G479.72 Capsicum annuum HOM05D004701 ORTHO05D005220 6.0e-13 78.2 89 42.7
MD06G1196700 Malus domestica HOM05D004701 ORTHO05D005220 1.0e-12 77.4 175 33.1
SalBow5G2872 Salvia bowleyana HOM05D004701 ORTHO05D005220 1.0e-12 77.4 95 42.1
TAR629G0729 Trochodendron aralioides HOM05D004701 ORTHO05D005220 1.0e-12 77.4 87 47.1
VMungo1309G2345 Vigna mungo HOM05D004701 ORTHO05D005220 1.0e-12 77.4 175 33.1
FvH4_5g14650 Fragaria vesca HOM05D004701 ORTHO05D005220 1.3e-12 77.0 173 32.4
AUR62008439 Chenopodium quinoa HOM05D004701 ORTHO05D005220 1.8e-12 76.6 73 46.6
FAN08G0610 Fragaria x ananassa HOM05D004701 ORTHO05D005220 1.8e-12 76.6 170 32.4
Sc12g0006470 Simmondsia chinensis HOM05D004701 ORTHO05D005220 1.8e-12 76.6 95 42.1
CDE02G4120 Ceratophyllum demersum HOM05D004701 ORTHO05D005220 2.3e-12 76.3 97 40.2
MBI02_g20482_MAGBIO Magnolia biondii HOM05D004701 ORTHO05D005220 2.3e-12 76.3 89 48.3
Medtr3g435140 Medicago truncatula HOM05D004701 ORTHO05D005220 2.3e-12 76.3 175 32.6
Nitab4.5_0005900g0110 Nicotiana tabacum HOM05D004701 ORTHO05D005220 2.3e-12 76.3 94 41.5
Aa31LG7G3460 Aethionema arabicum HOM05D004701 ORTHO05D005220 3.0e-12 75.9 173 32.9
Peaxi162Scf00274g00452 Petunia axillaris HOM05D004701 ORTHO05D005220 3.0e-12 75.9 94 40.4
RcHm_v2.0_Chr7g0181841 Rosa chinensis HOM05D004701 ORTHO05D005220 3.0e-12 75.9 93 45.2
Thhalv10006967m.g Eutrema salsugineum HOM05D004701 ORTHO05D005220 5.1e-12 75.1 172 32.6
Solyc03g115840.4 Solanum lycopersicum HOM05D004701 ORTHO05D005220 5.1e-12 75.1 87 43.7
Sopen03g034820 Solanum pennellii HOM05D004701 ORTHO05D005220 5.1e-12 75.1 87 43.7
Lj5A108G55 Lonicera japonica HOM05D004701 ORTHO05D005220 6.7e-12 74.7 88 45.5
Sp1g16680 Schrenkiella parvula HOM05D004701 ORTHO05D005220 6.7e-12 74.7 172 32.6
Pp3c17_15290 Physcomitrium patens HOM05D004701 ORTHO05D005220 8.7e-12 74.3 87 42.5
Phvul.009G185900 Phaseolus vulgaris HOM05D004701 ORTHO05D005220 1.5e-11 73.6 83 44.6
Lj4g0017943 Lotus japonicus HOM05D004701 ORTHO05D005220 1.9e-11 73.2 83 43.4
BcaB03g14489 Brassica carinata HOM05D004701 ORTHO05D005220 2.5e-11 72.8 172 31.4
BcaC07g41307 Brassica carinata HOM05D004701 ORTHO05D005220 2.5e-11 72.8 172 32.0
A09p59760 Brassica napus HOM05D004701 ORTHO05D005220 2.5e-11 72.8 172 32.0
C08p43140 Brassica napus HOM05D004701 ORTHO05D005220 2.5e-11 72.8 172 32.0
vmacro17562 Vaccinium macrocarpon HOM05D004701 ORTHO05D005220 2.5e-11 72.8 184 31.5
TPR.G11816 Trifolium pratense HOM05D004701 ORTHO05D005220 5.6e-11 71.6 173 31.8
FAN18G0140 Fragaria x ananassa HOM05D004701 ORTHO05D005220 7.4e-11 71.2 165 32.7
HanXRQChr05g0154901 Helianthus annuus HOM05D004701 ORTHO05D005220 7.4e-11 71.2 173 28.3
Lj2g0020469 Lotus japonicus HOM05D004701 ORTHO05D005220 7.4e-11 71.2 175 30.9
AT1G18700 Arabidopsis thaliana HOM05D004701 ORTHO05D005220 1.3e-10 70.5 171 31.6
ECA246G0122 Erigeron canadensis HOM05D004701 ORTHO05D005220 1.6e-10 70.1 175 28.6
Cc00_g08370 Coffea canephora HOM05D004701 ORTHO05D005220 2.1e-10 69.7 174 30.5
AL1G31150 Arabidopsis lyrata HOM05D004701 ORTHO05D005220 4.8e-10 68.6 171 31.0
Carub.0001s1833 Capsella rubella HOM05D004701 ORTHO05D005220 4.8e-10 68.6 82 43.9
CARHR019320 Cardamine hirsuta HOM05D004701 ORTHO05D005220 4.8e-10 68.6 82 43.9
Lsat_1_v5_gn_5_21460 Lactuca sativa HOM05D004701 ORTHO05D005220 4.8e-10 68.6 175 27.4
Nitab4.5_0001211g0300 Nicotiana tabacum HOM05D004701 ORTHO05D005220 1.4e-09 67.0 77 44.2
BolC8t51869H Brassica oleracea HOM05D004701 ORTHO05D005220 1.8e-09 66.6 82 43.9
BraA09t41353Z Brassica rapa HOM05D004701 ORTHO05D005220 1.8e-09 66.6 82 43.9
Haze_07305 Corylus avellana HOM05D004701 ORTHO05D005220 5.3e-09 65.1 62 50.0


User provided reference genes

Program Settings