Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO024G0003 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 6.0e-188 660.6 316 100.0
SMO200G0172 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 8.3e-129 464.2 546 51.5
SMO200G0253 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 2.0e-106 389.8 353 63.7
SMO200G0119 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 2.9e-105 386.0 279 72.4
SMO339G0058 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 3.1e-91 339.3 498 44.6
SMO089G0014 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 3.8e-89 332.4 354 56.5
SMO200G0133 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 5.6e-77 292.0 203 74.4
SMO307G0058 Selaginella moellendorffii HOM05D003015 ORTHO05D003733 1.9e-72 276.9 239 64.0
SMO200G0038 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 2.1e-68 263.5 300 55.0
SMO089G0017 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 3.0e-62 243.0 231 61.9
SMO200G0233 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 7.4e-61 238.4 287 53.3
AagrBONN_evm.TU.Sc2ySwM_344.1825 Anthoceros agrestis HOM05D005301 ORTHO05D006433 9.3e-56 221.5 558 31.2
CANSAT80G2324 Cannabis sativa HOM05D005301 ORTHO05D006433 6.3e-52 208.8 555 32.1
Glyma.04G192600 Glycine max HOM05D005301 ORTHO05D006433 1.8e-51 207.2 548 31.6
Manes.06G114900 Manihot esculenta HOM05D005301 ORTHO05D006433 5.3e-51 205.7 581 30.1
Lsat_1_v5_gn_4_78900 Lactuca sativa HOM05D005301 ORTHO05D006433 1.2e-50 204.5 536 31.2
ClCG06G017670 Citrullus lanatus HOM05D005301 ORTHO05D006433 2.6e-50 203.4 488 32.6
arahy.Tifrunner.gnm1.ann1.11HRG0 Arachis hypogaea HOM05D005301 ORTHO05D006433 4.5e-50 202.6 561 30.7
Os04g0483600 Oryza sativa ssp. japonica HOM05D005301 ORTHO05D006433 4.5e-50 202.6 544 30.5
FvH4_5g07300 Fragaria vesca HOM05D005301 ORTHO05D006433 5.9e-50 202.2 558 30.1
Lalb_Chr11g0069731 Lupinus albus HOM05D005301 ORTHO05D006433 5.9e-50 202.2 553 31.1
Aqoxy5G03589 Aquilegia oxysepala HOM05D005301 ORTHO05D006433 7.7e-50 201.8 566 30.2
AUR62025732 Chenopodium quinoa HOM05D005301 ORTHO05D006433 1.0e-49 201.4 454 35.0
FAN18G2536 Fragaria x ananassa HOM05D005301 ORTHO05D006433 1.0e-49 201.4 558 30.1
Psat6g217880 Pisum sativum HOM05D005301 ORTHO05D006433 1.0e-49 201.4 559 31.3
Nn4g22465 Nelumbo nucifera HOM05D005301 ORTHO05D006433 1.7e-49 200.7 570 29.8
CsaV3_1G000790 Cucumis sativus L. HOM05D005301 ORTHO05D006433 2.9e-49 199.9 571 30.5
Sed0013046 Sechium edule HOM05D005301 ORTHO05D006433 3.8e-49 199.5 569 29.9
Aa31LG3G5920 Aethionema arabicum HOM05D005301 ORTHO05D006433 5.0e-49 199.1 566 29.5
Glyma.06G173200 Glycine max HOM05D005301 ORTHO05D006433 5.0e-49 199.1 562 31.0
SMO200G0165 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 6.5e-49 198.7 263 49.0
Ciclev10019136m.g Citrus clementina HOM05D005301 ORTHO05D006433 8.5e-49 198.4 583 29.2
FAN04G2720 Fragaria x ananassa HOM05D005301 ORTHO05D006433 8.5e-49 198.4 558 29.4
THA.LOC104825004 Tarenaya hassleriana HOM05D005301 ORTHO05D006433 8.5e-49 198.4 569 30.2
BraA03t11987Z Brassica rapa HOM05D005301 ORTHO05D006433 1.4e-48 197.6 569 30.6
Gohir.D12G190800 Gossypium hirsutum HOM05D005301 ORTHO05D006433 1.9e-48 197.2 582 29.6
Eucgr.L01339 Eucalyptus grandis HOM05D005301 ORTHO05D006433 2.5e-48 196.8 583 29.7
FAN13G0064 Fragaria x ananassa HOM05D005301 ORTHO05D006433 2.5e-48 196.8 573 29.8
Gorai.008G204700 Gossypium raimondii HOM05D005301 ORTHO05D006433 3.2e-48 196.4 584 29.5
MD06G1157400 Malus domestica HOM05D005301 ORTHO05D006433 4.2e-48 196.1 575 30.1
SalBow4G2023 Salvia bowleyana HOM05D005301 ORTHO05D006433 4.2e-48 196.1 560 30.2
A03p27760 Brassica napus HOM05D005301 ORTHO05D006433 5.5e-48 195.7 568 30.6
ECA232G2312 Erigeron canadensis HOM05D005301 ORTHO05D006433 5.5e-48 195.7 549 30.2
HanXRQChr09g0272861 Helianthus annuus HOM05D005301 ORTHO05D006433 5.5e-48 195.7 565 29.6
Potri.015G090100 Populus trichocarpa HOM05D005301 ORTHO05D006433 5.5e-48 195.7 583 30.2
RcHm_v2.0_Chr7g0191331 Rosa chinensis HOM05D005301 ORTHO05D006433 5.5e-48 195.7 556 30.0
ATR0824G115 Amborella trichopoda HOM05D004726 ORTHO05D005986 7.2e-48 195.3 562 29.7
PSO782G4848 Papaver somniferum HOM05D005301 ORTHO05D006433 7.2e-48 195.3 550 29.5
Phvul.009G169100 Phaseolus vulgaris HOM05D005301 ORTHO05D006433 7.2e-48 195.3 562 30.4
SMO001G0006 Selaginella moellendorffii HOM05D003015 ORTHO05D003733 7.2e-48 195.3 266 50.4
AT5G50310 Arabidopsis thaliana HOM05D005301 ORTHO05D006433 9.4e-48 194.9 574 30.3
PSO063G0990 Papaver somniferum HOM05D005301 ORTHO05D006433 9.4e-48 194.9 549 29.3
CiPaw.11G012400 Carya illinoinensis HOM05D005301 ORTHO05D006433 1.2e-47 194.5 579 29.0
Gohir.A12G188000 Gossypium hirsutum HOM05D005301 ORTHO05D006433 1.2e-47 194.5 584 29.5
QL10p005311 Quercus lobata HOM05D005301 ORTHO05D006433 1.2e-47 194.5 578 29.1
Sabra15G0112300 Salix brachista HOM05D005301 ORTHO05D006433 1.2e-47 194.5 584 29.5
Lj1g0016804 Lotus japonicus HOM05D005301 ORTHO05D006433 1.6e-47 194.1 564 29.6
Nitab4.5_0010042g0030 Nicotiana tabacum HOM05D005301 ORTHO05D006433 2.1e-47 193.7 578 29.6
GSVIVG01007548001 Vitis vinifera HOM05D005301 ORTHO05D006433 2.1e-47 193.7 578 29.8
BolC3t15670H Brassica oleracea HOM05D005301 ORTHO05D006433 2.7e-47 193.4 559 29.9
Pp3c16_5780 Physcomitrium patens HOM05D005301 ORTHO05D006433 2.7e-47 193.4 562 30.2
Solyc03g111390.4 Solanum lycopersicum HOM05D005301 ORTHO05D006433 2.7e-47 193.4 571 29.4
CAN.G352.5 Capsicum annuum HOM05D005301 ORTHO05D006433 3.6e-47 193.0 573 29.1
Sc22g0004050 Simmondsia chinensis HOM05D005301 ORTHO05D006433 4.6e-47 192.6 576 29.3
Sopen03g030520 Solanum pennellii HOM05D005301 ORTHO05D006433 4.6e-47 192.6 571 29.1
AL8G24360 Arabidopsis lyrata HOM05D005301 ORTHO05D006433 6.1e-47 192.2 576 29.7
CARHR258240 Cardamine hirsuta HOM05D005301 ORTHO05D006433 7.9e-47 191.8 578 29.4
Dinv11108 Davidia involucrata HOM05D005301 ORTHO05D006433 7.9e-47 191.8 566 28.6
Migut.I00257 Erythranthe guttata HOM05D005301 ORTHO05D006433 7.9e-47 191.8 572 29.2
Carub.0008s1035 Capsella rubella HOM05D005301 ORTHO05D006433 1.0e-46 191.4 577 29.6
Thhalv10012907m.g Eutrema salsugineum HOM05D005301 ORTHO05D006433 1.0e-46 191.4 567 29.8
Nitab4.5_0003282g0130 Nicotiana tabacum HOM05D005301 ORTHO05D006433 1.0e-46 191.4 574 29.3
TAR374G1436 Trochodendron aralioides HOM05D005301 ORTHO05D006433 1.0e-46 191.4 577 29.5
Mapoly0001s0540 Marchantia polymorpha HOM05D005301 ORTHO05D006433 1.4e-46 191.0 556 29.9
Haze_07279 Corylus avellana HOM05D005301 ORTHO05D006433 1.8e-46 190.7 536 30.8
PGSC0003DMG400015238 Solanum tuberosum HOM05D005301 ORTHO05D006433 2.3e-46 190.3 571 28.9
BcaB01g02903 Brassica carinata HOM05D005301 ORTHO05D006433 3.0e-46 189.9 551 30.7
Sp6g12390 Schrenkiella parvula HOM05D005301 ORTHO05D006433 3.0e-46 189.9 577 29.8
TWI39G1189 Tripterygium wilfordii HOM05D005301 ORTHO05D006433 3.0e-46 189.9 584 29.1
vmacro19243 Vaccinium macrocarpon HOM05D005301 ORTHO05D006433 3.0e-46 189.9 545 31.2
Oeu011576.1 Olea europaea HOM05D005301 ORTHO05D006433 5.1e-46 189.1 581 28.9
BcaC01g04820 Brassica carinata HOM05D005301 ORTHO05D006433 8.8e-46 188.3 569 30.1
Medtr1g107265 Medicago truncatula HOM05D005301 ORTHO05D006433 1.5e-45 187.6 600 28.7
PGR083G1269 Punica granatum HOM05D005301 ORTHO05D006433 2.5e-45 186.8 578 29.2
EL10Ac7g18070 Beta vulgaris HOM05D005301 ORTHO05D006433 4.3e-45 186.0 562 28.5
Actinidia16194 Actinidia chinensis HOM05D005301 ORTHO05D006433 7.4e-45 185.3 579 28.8
Cfa018895 Carpinus fangiana HOM05D005301 ORTHO05D006433 7.4e-45 185.3 573 30.5
Prupe.5G157400 Prunus persica HOM05D005301 ORTHO05D006433 1.3e-44 184.5 577 29.3
Cc04_g10470 Coffea canephora HOM05D005301 ORTHO05D006433 2.2e-44 183.7 562 28.6
C03p33480 Brassica napus HOM05D005301 ORTHO05D006433 2.8e-44 183.3 596 29.2
FAN08G2537 Fragaria x ananassa HOM05D005301 ORTHO05D006433 2.8e-44 183.3 506 30.8
MD14G1164000 Malus domestica HOM05D005301 ORTHO05D006433 4.8e-44 182.6 571 27.8
SGA_v2.0_scaffold102G29851 Striga asiatica HOM05D005301 ORTHO05D006433 6.3e-44 182.2 589 29.0
CDE02G1357 Ceratophyllum demersum HOM05D005301 ORTHO05D006433 5.3e-43 179.1 553 27.7
Duzib205G0739 Durio zibethinus HOM05D005301 ORTHO05D006433 5.9e-42 175.6 606 27.9
AUR62001274 Chenopodium quinoa HOM05D005301 ORTHO05D006433 7.2e-40 168.7 537 29.1
MELO3C026231.2 Cucumis melo HOM05D005301 ORTHO05D006433 9.4e-40 168.3 519 30.3
Eucgr.B00150 Eucalyptus grandis HOM05D005301 ORTHO05D006433 5.1e-38 162.5 556 27.9
Atru.chr9.1005 Acer truncatum HOM05D005301 ORTHO05D006433 2.6e-37 160.2 212 42.0
Cpa.g.sc52.37 Carica papaya HOM05D005301 ORTHO05D006433 5.7e-37 159.1 212 41.5
Thecc.03G122400 Theobroma cacao HOM05D005301 ORTHO05D006433 1.7e-36 157.5 173 48.0
Ah.08g218140 Amaranthus hybridus HOM05D005301 ORTHO05D006433 4.8e-36 156.0 539 28.8
Ca_16092_v3 Cicer arietinum L. HOM05D005301 ORTHO05D006433 2.0e-34 150.6 518 29.5
Hund05643 Selenicereus undatus HOM05D005301 ORTHO05D006433 3.5e-34 149.8 539 27.5
HPP92_004584 Vanilla planifolia HOM05D005301 ORTHO05D006433 2.2e-33 147.1 167 46.1
Peaxi162Scf00089g00721 Petunia axillaris HOM05D005301 ORTHO05D006433 1.9e-32 144.1 208 38.5
Zm00001eb079290 Zea mays HOM05D005301 ORTHO05D006433 2.5e-32 143.7 495 27.9
CBR_g40809 Chara braunii HOM05D005301 ORTHO05D006433 7.2e-32 142.1 173 44.5
QL04p021669 Quercus lobata HOM05D005301 ORTHO05D006433 4.7e-31 139.4 173 43.9
arahy.Tifrunner.gnm1.ann1.86E75A Arachis hypogaea HOM05D005301 ORTHO05D006433 1.4e-30 137.9 496 28.0
COL.COLO4_09264 Corchorus olitorius HOM05D005301 ORTHO05D006433 2.3e-30 137.1 520 26.9
MBI06_g16660_MAGBIO Magnolia biondii HOM05D005301 ORTHO05D006433 4.0e-30 136.3 212 39.6
Rhsim08G0184700 Rhododendron simsii HOM05D005301 ORTHO05D006433 1.5e-29 134.4 564 26.6
Lj9A475G63 Lonicera japonica HOM05D005301 ORTHO05D006433 4.4e-29 132.9 141 48.2
BcaC01g04819 Brassica carinata HOM05D005301 ORTHO05D006433 1.3e-25 121.3 466 28.1
VMungo1309G2118 Vigna mungo HOM05D005301 ORTHO05D006433 3.8e-25 119.8 436 28.0
TPR.G3295 Trifolium pratense HOM05D005301 ORTHO05D006433 1.6e-23 114.4 440 27.5
SEGI_22253 Sequoiadendron giganteum HOM05D005301 ORTHO05D006433 2.3e-22 110.5 125 47.2
SEGI_14135 Sequoiadendron giganteum HOM05D005301 ORTHO05D006433 5.7e-21 105.9 89 60.7
Cpa.g.sc52.36 Carica papaya HOM05D005301 ORTHO05D006433 2.2e-20 104.0 184 37.5
Lj9A475G62 Lonicera japonica HOM05D005301 ORTHO05D006433 2.2e-20 104.0 81 64.2
unitig_899.g15425 Utricularia gibba HOM05D005301 ORTHO05D006433 2.2e-20 104.0 183 37.7
DCAR_016415 Daucus carota HOM05D005301 ORTHO05D006433 8.3e-20 102.1 421 27.1
HPP92_004592 Vanilla planifolia HOM05D004180 ORTHO05D005323 3.1e-19 100.1 82 61.0
CSS0025438 Camellia sinensis var. sinensis HOM05D005301 ORTHO05D006433 7.0e-19 99.0 217 35.0
Eucgr.B00154 Eucalyptus grandis HOM05D005301 ORTHO05D006433 2.0e-18 97.4 91 51.6
MBI06_g32519_MAGBIO Magnolia biondii HOM05D005301 ORTHO05D006433 4.5e-18 96.3 86 57.0
PRCOL_00006105 Prasinoderma coloniale HOM05D005301 ORTHO05D006433 5.0e-17 92.8 172 34.9
Cre09.g398200 Chlamydomonas reinhardtii HOM05D005301 ORTHO05D006433 4.2e-16 89.7 173 33.5
Lsat_1_v5_gn_2_63001 Lactuca sativa HOM05D005301 ORTHO05D006433 2.6e-13 80.5 57 61.4
Lsat_1_v5_gn_9_521 Lactuca sativa HOM05D005301 ORTHO05D006433 3.4e-13 80.1 57 61.4
MCO16G658 Micromonas commoda HOM05D005301 ORTHO05D006433 5.7e-13 79.3 97 43.3
Hma1.2p1_0941F.1_g239720 Hydrangea macrophylla HOM05D005301 ORTHO05D006433 5.4e-11 72.8 44 68.2
Hma1.2p1_3384F.1_g335740 Hydrangea macrophylla HOM05D005301 ORTHO05D006433 5.4e-11 72.8 44 68.2
CSS0020618 Camellia sinensis var. sinensis HOM05D005301 ORTHO05D006433 9.1e-11 72.0 38 76.3
Actinidia19384 Actinidia chinensis HOM05D005301 ORTHO05D006433 2.8e-07 60.5 241 26.1
CAN.G352.12 Capsicum annuum HOM05D005301 ORTHO05D006433 4.7e-07 59.7 50 58.0
HPP92_004591 Vanilla planifolia HOM05D005301 ORTHO05D006433 4.0e-06 56.6 78 38.5
Peaxi162Scf00089g00716 Petunia axillaris HOM05D005301 ORTHO05D006433 5.2e-06 56.2 48 62.5


User provided reference genes

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