Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO010G0002 Selaginella moellendorffii HOM05D014392 ORTHO05D011519 0.0e+00 1166.0 571 100.0
SMO010G0021 Selaginella moellendorffii HOM05D014392 ORTHO05D011519 0.0e+00 1113.6 571 96.3
SMO010G0005 Selaginella moellendorffii HOM05D014392 ORTHO05D011519 1.9e-304 1048.5 571 91.9
SMO307G0067 Selaginella moellendorffii HOM05D014392 ORTHO05D011519 1.5e-269 932.6 532 88.9
SMO358G0448 Selaginella moellendorffii HOM05D014392 ORTHO05D011519 1.4e-179 633.6 586 61.4
SMO358G0068 Selaginella moellendorffii HOM05D014392 ORTHO05D011519 9.2e-179 630.9 391 83.1
SMO306G0012 Selaginella moellendorffii HOM05D014392 ORTHO05D011519 6.5e-132 475.3 294 79.9
SMO307G0027 Selaginella moellendorffii HOM05D012358 ORTHO05D011519 9.8e-72 275.4 505 34.5
SMO268G0048 Selaginella moellendorffii HOM05D012358 ORTHO05D011519 1.9e-54 218.0 276 41.3
SMO115G0290 Selaginella moellendorffii HOM05D012358 ORTHO05D011519 2.7e-53 214.2 218 46.8
SMO177G0008 Selaginella moellendorffii HOM05D012358 ORTHO05D011519 3.2e-46 190.7 229 42.4
SMO145G0193 Selaginella moellendorffii HOM05D012358 ORTHO05D011519 1.4e-41 175.3 187 46.0
SMO111G0016 Selaginella moellendorffii HOM05D012358 ORTHO05D011519 1.8e-41 174.9 178 47.2
SMO188G0005 Selaginella moellendorffii HOM05D012358 ORTHO05D011519 1.3e-34 152.1 141 49.6
SMO155G0004 Selaginella moellendorffii HOM05D012358 ORTHO05D011519 3.5e-29 134.0 148 45.3
SMO306G0011 Selaginella moellendorffii HOM05D012358 ORTHO05D011519 4.6e-29 133.7 120 49.2
Pp3c8_590 Physcomitrium patens HOM05D012329 ORTHO05D011519 3.9e-20 104.0 262 26.3
Pp3c23_19910 Physcomitrium patens HOM05D012329 ORTHO05D011519 8.7e-20 102.8 218 30.7
SMO250G0006 Selaginella moellendorffii HOM05D012358 ORTHO05D011519 1.4e-17 95.5 113 42.5
AagrBONN_evm.TU.Sc2ySwM_117.3258 Anthoceros agrestis HOM05D008475 ORTHO05D000004 1.0e-12 79.3 230 30.9
AagrBONN_evm.TU.Sc2ySwM_369.106 Anthoceros agrestis HOM05D008475 ORTHO05D009448 1.4e-12 79.0 199 31.2
AagrBONN_evm.TU.Sc2ySwM_117.2946 Anthoceros agrestis HOM05D008475 ORTHO05D000004 1.5e-11 75.5 214 27.1
AagrBONN_evm.TU.Sc2ySwM_368.1340 Anthoceros agrestis HOM05D008475 ORTHO05D000004 1.7e-10 72.0 170 31.2
Hund10465 Selenicereus undatus HOM05D008000 ORTHO05D010275 5.3e-09 67.0 259 26.3
Hma1.2p1_1077F.1_g254720 Hydrangea macrophylla HOM05D000003 ORTHO05D000006 1.5e-08 65.5 173 27.7
Atru.chr11.644 Acer truncatum HOM05D000003 ORTHO05D000004 2.0e-08 65.1 192 28.6
SEGI_31456 Sequoiadendron giganteum HOM05D009358 ORTHO05D015187 2.6e-08 64.7 170 30.6
AagrBONN_evm.TU.Sc2ySwM_344.44 Anthoceros agrestis HOM05D008475 ORTHO05D000004 3.4e-08 64.3 263 28.1
SHI38591 Sapria himalayana HOM05D000024 ORTHO05D000006 3.4e-08 64.3 217 26.3
Atru.chr4.2177 Acer truncatum HOM05D000003 ORTHO05D000004 7.7e-08 63.2 293 26.6
SHI00717 Sapria himalayana HOM05D000024 ORTHO05D000006 1.0e-07 62.8 202 21.8
AagrBONN_evm.TU.Sc2ySwM_340.1129 Anthoceros agrestis HOM05D007366 ORTHO05D000004 1.3e-07 62.4 210 27.1
SHI34405 Sapria himalayana HOM05D000024 ORTHO05D000006 1.3e-07 62.4 158 27.8
CSS0036010 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.7e-07 62.0 228 29.4
SHI49201 Sapria himalayana HOM05D000024 ORTHO05D000006 2.9e-07 61.2 202 20.8
Atru.chr2.3028 Acer truncatum HOM05D000003 ORTHO05D000004 3.8e-07 60.8 200 27.5
SHI19911 Sapria himalayana HOM05D000024 ORTHO05D000006 3.8e-07 60.8 232 24.1
Atru.chr1.3974 Acer truncatum HOM05D000003 ORTHO05D000004 5.0e-07 60.5 175 31.4
AagrBONN_evm.TU.Sc2ySwM_228.1102 Anthoceros agrestis HOM05D010155 ORTHO05D000004 5.0e-07 60.5 157 29.9
Atru.chr6.713 Acer truncatum HOM05D000003 ORTHO05D000004 6.5e-07 60.1 210 26.7
AagrBONN_evm.TU.Sc2ySwM_368.3111 Anthoceros agrestis HOM05D008475 ORTHO05D000004 8.5e-07 59.7 142 31.0
Pp3c8_14850 Physcomitrium patens HOM05D012329 ORTHO05D000004 8.5e-07 59.7 197 24.4
SEGI_08404 Sequoiadendron giganteum HOM05D009358 ORTHO05D011087 8.5e-07 59.7 178 29.2
Atru.chr2.864 Acer truncatum HOM05D000003 ORTHO05D000006 1.1e-06 59.3 277 26.7
AUR62035763 Chenopodium quinoa HOM05D000003 ORTHO05D000006 1.1e-06 59.3 291 23.7
SEGI_12707 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 1.1e-06 59.3 139 32.4
CANSAT11G2262 Cannabis sativa HOM05D000003 ORTHO05D000006 1.4e-06 58.9 253 26.5
Hund29189 Selenicereus undatus HOM05D008000 ORTHO05D000006 2.5e-06 58.2 254 25.6
Hund29191 Selenicereus undatus HOM05D008000 ORTHO05D000006 2.5e-06 58.2 254 25.6
Atru.chr3.3701 Acer truncatum HOM05D000003 ORTHO05D000004 3.2e-06 57.8 210 26.7
SHI25091 Sapria himalayana HOM05D000024 ORTHO05D000006 3.2e-06 57.8 152 25.0
CSS0004372 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.2e-06 57.4 174 30.5
AagrBONN_evm.TU.Sc2ySwM_117.3005 Anthoceros agrestis HOM05D008475 ORTHO05D000004 5.5e-06 57.0 108 35.2
SHI50349 Sapria himalayana HOM05D000024 ORTHO05D000006 5.5e-06 57.0 152 25.7


User provided reference genes

Program Settings