Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO001G0011 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 2.5e-101 372.1 182 100.0
SMO336G0028 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 6.6e-62 241.1 174 75.3
SMO337G0034 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 6.6e-62 241.1 174 75.3
SMO337G0042 Selaginella moellendorffii HOM05D005970 ORTHO05D007146 6.6e-62 241.1 174 75.3
AagrBONN_evm.TU.Sc2ySwM_368.857 Anthoceros agrestis HOM05D005970 ORTHO05D007146 8.3e-41 171.0 174 54.0
AagrBONN_evm.TU.Sc2ySwM_368.849 Anthoceros agrestis HOM05D005970 ORTHO05D007146 4.1e-40 168.7 174 53.4
Mapoly0123s0015 Marchantia polymorpha HOM05D005970 ORTHO05D007146 3.6e-36 155.6 174 50.0
Os04g0489100 Oryza sativa ssp. japonica HOM05D005970 ORTHO05D007146 2.0e-34 149.8 174 46.6
HPP92_002722 Vanilla planifolia HOM05D005970 ORTHO05D007146 1.1e-32 144.1 174 47.7
HPP92_001247 Vanilla planifolia HOM05D005970 ORTHO05D007146 1.4e-32 143.7 174 43.7
HPP92_001263 Vanilla planifolia HOM05D005970 ORTHO05D007146 1.4e-32 143.7 174 43.7
Zm00001eb425400 Zea mays HOM05D005970 ORTHO05D007146 3.2e-32 142.5 174 45.4
Ah.12g062330 Amaranthus hybridus HOM05D005970 ORTHO05D007146 2.7e-31 139.4 174 42.5
CiPaw.01G106400 Carya illinoinensis HOM05D005970 ORTHO05D007146 4.6e-31 138.7 174 46.6
Lj3A262T16 Lonicera japonica HOM05D005970 ORTHO05D007146 4.6e-31 138.7 174 43.1
Hma1.2p1_1477F.1_g285890 Hydrangea macrophylla HOM05D005970 ORTHO05D007146 1.3e-30 137.1 174 43.7
Actinidia32934 Actinidia chinensis HOM05D005970 ORTHO05D007146 2.3e-30 136.3 174 43.1
MELO3C011504.2 Cucumis melo HOM05D005970 ORTHO05D007146 3.0e-30 136.0 174 44.8
Lalb_Chr06g0164591 Lupinus albus HOM05D005970 ORTHO05D007146 3.9e-30 135.6 174 44.3
MBI08_g17320_MAGBIO Magnolia biondii HOM05D005970 ORTHO05D007146 3.9e-30 135.6 174 42.5
Pp3c6_14360 Physcomitrium patens HOM05D005970 ORTHO05D007146 5.1e-30 135.2 176 44.9
ATR0618G312 Amborella trichopoda HOM05D005970 ORTHO05D007146 8.6e-30 134.4 174 43.7
Sed0012260 Sechium edule HOM05D005970 ORTHO05D007146 8.6e-30 134.4 174 44.8
Duzib151G0884 Durio zibethinus HOM05D005970 ORTHO05D007146 2.5e-29 132.9 174 43.7
GSVIVG01013548001 Vitis vinifera HOM05D005970 ORTHO05D007146 3.3e-29 132.5 177 45.8
CsaV3_6G003170 Cucumis sativus L. HOM05D005970 ORTHO05D007146 4.3e-29 132.1 174 43.7
PGR083G2204 Punica granatum HOM05D005970 ORTHO05D007146 4.3e-29 132.1 173 42.8
TAR362G0058 Trochodendron aralioides HOM05D005970 ORTHO05D007146 4.3e-29 132.1 174 43.1
AT1G05790 Arabidopsis thaliana HOM05D005970 ORTHO05D007146 5.6e-29 131.7 176 43.2
AL1G15700 Arabidopsis lyrata HOM05D005970 ORTHO05D007146 7.3e-29 131.3 176 43.2
CSS0014236 Camellia sinensis var. sinensis HOM05D005970 ORTHO05D007146 7.3e-29 131.3 174 42.0
RcHm_v2.0_Chr4g0408981 Rosa chinensis HOM05D005970 ORTHO05D007146 7.3e-29 131.3 174 44.8
VMungo0720G0532 Vigna mungo HOM05D005970 ORTHO05D007146 7.3e-29 131.3 173 45.1
C08p02230 Brassica napus HOM05D005970 ORTHO05D007146 9.6e-29 131.0 176 43.2
Potri.014G150800 Populus trichocarpa HOM05D005970 ORTHO05D007146 9.6e-29 131.0 172 43.6
Carub.0001s0513 Capsella rubella HOM05D005970 ORTHO05D007146 1.2e-28 130.6 176 43.2
AUR62042870 Chenopodium quinoa HOM05D005970 ORTHO05D007146 1.2e-28 130.6 174 40.8
Ca_11416_v3 Cicer arietinum L. HOM05D005970 ORTHO05D007146 1.2e-28 130.6 176 44.9
Thhalv10006938m.g Eutrema salsugineum HOM05D005970 ORTHO05D007146 1.2e-28 130.6 176 43.8
Nitab4.5_0001049g0010 Nicotiana tabacum HOM05D005970 ORTHO05D007146 1.2e-28 130.6 174 43.1
Psat6g242520 Pisum sativum HOM05D005970 ORTHO05D007146 1.2e-28 130.6 173 44.5
Aa31LG1G8570 Aethionema arabicum HOM05D005970 ORTHO05D007146 2.8e-28 129.4 176 42.6
CAN.G710.55 Capsicum annuum HOM05D005970 ORTHO05D007146 2.8e-28 129.4 181 43.1
Ciclev10023314m.g Citrus clementina HOM05D005970 ORTHO05D007146 2.8e-28 129.4 173 42.2
Pp3c5_12210 Physcomitrium patens HOM05D005970 ORTHO05D007146 2.8e-28 129.4 180 44.4
Sp1g04590 Schrenkiella parvula HOM05D005970 ORTHO05D007146 2.8e-28 129.4 176 43.2
A08p36290 Brassica napus HOM05D005970 ORTHO05D007146 3.6e-28 129.0 176 43.2
BolC8t47015H Brassica oleracea HOM05D005970 ORTHO05D007146 3.6e-28 129.0 176 43.2
BraA08t35533Z Brassica rapa HOM05D005970 ORTHO05D007146 3.6e-28 129.0 176 43.2
Cpa.g.sc164.4 Carica papaya HOM05D005970 ORTHO05D007146 3.6e-28 129.0 173 43.4
Dinv22666 Davidia involucrata HOM05D005970 ORTHO05D007146 3.6e-28 129.0 174 42.5
Nitab4.5_0002313g0060 Nicotiana tabacum HOM05D005970 ORTHO05D007146 4.7e-28 128.6 174 42.5
CANSAT80G1971 Cannabis sativa HOM05D005970 ORTHO05D007146 6.2e-28 128.3 174 43.7
Lsat_1_v5_gn_4_37800 Lactuca sativa HOM05D005970 ORTHO05D007146 6.2e-28 128.3 174 42.5
MD04G1032500 Malus domestica HOM05D005970 ORTHO05D007146 6.2e-28 128.3 174 44.8
Medtr1g116780 Medicago truncatula HOM05D005970 ORTHO05D007146 6.2e-28 128.3 173 44.5
arahy.Tifrunner.gnm1.ann1.R0ZLJW Arachis hypogaea HOM05D005970 ORTHO05D007146 8.1e-28 127.9 174 42.5
Lj5g0014069 Lotus japonicus HOM05D005970 ORTHO05D007146 8.1e-28 127.9 174 43.1
arahy.Tifrunner.gnm1.ann1.ILR90A Arachis hypogaea HOM05D005970 ORTHO05D007146 1.1e-27 127.5 174 42.5
CBR_g2768 Chara braunii HOM05D005970 ORTHO05D007146 1.1e-27 127.5 177 46.3
HanXRQChr17g0557031 Helianthus annuus HOM05D005970 ORTHO05D007146 1.1e-27 127.5 174 43.1
Thecc.04G181600 Theobroma cacao HOM05D005970 ORTHO05D007146 1.1e-27 127.5 174 42.5
Glyma.20G248000 Glycine max HOM05D005970 ORTHO05D007146 1.4e-27 127.1 173 42.8
Solyc09g098450.4 Solanum lycopersicum HOM05D005970 ORTHO05D007146 1.4e-27 127.1 174 42.5
Sopen09g036380 Solanum pennellii HOM05D005970 ORTHO05D007146 1.4e-27 127.1 174 42.5
Eucgr.A00211 Eucalyptus grandis HOM05D005970 ORTHO05D007146 1.8e-27 126.7 174 41.4
THA.LOC104800916 Tarenaya hassleriana HOM05D005970 ORTHO05D007146 1.8e-27 126.7 176 42.6
TPR.G8892 Trifolium pratense HOM05D005970 ORTHO05D007146 1.8e-27 126.7 173 43.4
Aqoxy2G04048 Aquilegia oxysepala HOM05D005970 ORTHO05D007146 2.4e-27 126.3 174 41.4
BolC5t29189H Brassica oleracea HOM05D005970 ORTHO05D007146 2.4e-27 126.3 176 42.0
ECA234G4469 Erigeron canadensis HOM05D005970 ORTHO05D007146 3.1e-27 125.9 174 43.7
FvH4_4g11690 Fragaria vesca HOM05D005970 ORTHO05D007146 4.0e-27 125.6 174 44.3
FAN12G1273 Fragaria x ananassa HOM05D005970 ORTHO05D007146 4.0e-27 125.6 174 44.3
C05p04110 Brassica napus HOM05D005970 ORTHO05D007146 5.2e-27 125.2 176 41.5
Sc22g0002260 Simmondsia chinensis HOM05D005970 ORTHO05D007146 6.9e-27 124.8 174 42.5
Peaxi162Scf00286g00235 Petunia axillaris HOM05D005970 ORTHO05D007146 8.9e-27 124.4 174 42.5
A10p04500 Brassica napus HOM05D005970 ORTHO05D007146 1.2e-26 124.0 177 42.4
BraA10t42716Z Brassica rapa HOM05D005970 ORTHO05D007146 1.2e-26 124.0 177 42.4
FAN07G1016 Fragaria x ananassa HOM05D005970 ORTHO05D007146 1.2e-26 124.0 174 43.7
Gohir.A02G013401 Gossypium hirsutum HOM05D005970 ORTHO05D007146 1.2e-26 124.0 174 41.4
Gohir.D02G014300 Gossypium hirsutum HOM05D005970 ORTHO05D007146 1.2e-26 124.0 174 42.0
COL.COLO4_24350 Corchorus olitorius HOM05D005970 ORTHO05D007146 1.5e-26 123.6 175 41.1
Gorai.005G017800 Gossypium raimondii HOM05D005970 ORTHO05D007146 2.0e-26 123.2 174 41.4
Prupe.1G181900 Prunus persica HOM05D005970 ORTHO05D007146 2.6e-26 122.9 178 43.3
FAN12G0387 Fragaria x ananassa HOM05D005970 ORTHO05D007146 2.9e-25 119.4 174 43.7
Haze_11055 Corylus avellana HOM05D005970 ORTHO05D007146 4.9e-25 118.6 192 39.6
QL10p046561 Quercus lobata HOM05D005970 ORTHO05D007146 1.4e-24 117.1 210 37.6
Atru.chr3.1658_Atru.chr3.1659 Acer truncatum HOM05D005970 ORTHO05D007146 3.2e-24 115.9 178 41.0
Sabra14G0114200 Salix brachista HOM05D005970 ORTHO05D007146 2.1e-23 113.2 216 35.2
ClCG08G003970 Citrullus lanatus HOM05D005970 ORTHO05D007146 4.0e-19 99.0 143 40.6
Rhsim09G0037500 Rhododendron simsii HOM05D005970 ORTHO05D007146 1.2e-18 97.4 147 39.5
Cc00_g08710 Coffea canephora HOM05D005970 ORTHO05D007146 1.1e-16 90.9 211 33.2
Phvul.007G002300 Phaseolus vulgaris HOM05D005970 ORTHO05D007146 1.1e-16 90.9 116 45.7
Sabra02G0176700 Salix brachista HOM05D005970 ORTHO05D007146 1.3e-14 84.0 144 36.8
Nn1g09841 Nelumbo nucifera HOM05D005970 ORTHO05D007146 8.7e-14 81.3 59 59.3
Potri.002G231534 Populus trichocarpa HOM05D005970 ORTHO05D007146 2.1e-12 76.6 70 47.1
vmacro00562 Vaccinium macrocarpon HOM05D005970 ORTHO05D007146 8.1e-12 74.7 192 30.2
CDE09G0649 Ceratophyllum demersum HOM05D005970 ORTHO05D007146 1.3e-09 67.4 117 41.9
Nn1g09815 Nelumbo nucifera HOM05D005970 ORTHO05D007146 1.1e-08 64.3 108 40.7


User provided reference genes

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