Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI54824 Sapria himalayana HOM05D001560 ORTHO05D003613 3.1e-51 204.9 108 100.0
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 2.0e-50 202.2 108 91.7
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 2.6e-50 201.8 106 92.5
SHI36625 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-48 196.4 108 88.0
SHI36374 Sapria himalayana HOM05D001560 ORTHO05D003613 1.9e-48 195.7 107 87.9
SHI37382 Sapria himalayana HOM05D001560 ORTHO05D003613 1.9e-48 195.7 108 88.9
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 4.2e-48 194.5 108 88.9
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 5.5e-48 194.1 106 88.7
SHI36270 Sapria himalayana HOM05D001560 ORTHO05D003613 9.3e-48 193.4 108 88.0
SHI46061 Sapria himalayana HOM05D001560 ORTHO05D003613 9.3e-48 193.4 108 88.0
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-47 193.0 108 88.9
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 7.9e-47 190.3 106 87.7
SHI37855 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-46 189.5 108 87.0
SHI37134 Sapria himalayana HOM05D001560 ORTHO05D003613 8.7e-46 186.8 106 85.8
SHI38532 Sapria himalayana HOM05D001560 ORTHO05D003613 3.7e-44 181.4 102 87.3
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 4.8e-44 181.0 108 84.3
SHI45394 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-43 179.9 107 83.2
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-42 176.4 96 86.5
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-42 176.4 96 86.5
Cpa.g.sc89.22 Carica papaya HOM05D001560 ORTHO05D003613 4.5e-42 174.5 95 88.4
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 1.0e-41 173.3 95 87.4
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 2.9e-41 171.8 95 87.4
Lj2C1229T3 Lonicera japonica HOM05D001560 ORTHO05D003613 2.9e-41 171.8 95 87.4
Nn1g09975 Nelumbo nucifera HOM05D001560 ORTHO05D003613 2.9e-41 171.8 95 87.4
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 2.9e-41 171.8 95 87.4
Nn4g26006 Nelumbo nucifera HOM05D001560 ORTHO05D003613 2.9e-41 171.8 95 87.4
Ca_14833_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 3.8e-41 171.4 95 87.4
Ca_22165_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 3.8e-41 171.4 95 87.4
LjContig00315g0001212 Lotus japonicus HOM05D001560 ORTHO05D003613 3.8e-41 171.4 95 87.4
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 3.8e-41 171.4 95 87.4
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 3.8e-41 171.4 95 87.4
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 3.8e-41 171.4 95 87.4
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 3.8e-41 171.4 95 87.4
TPR.G162 Trifolium pratense HOM05D001560 ORTHO05D003613 3.8e-41 171.4 95 87.4
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 8.4e-41 170.2 95 86.3
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 8.4e-41 170.2 95 86.3
Hma1.2p1_0261F.1_g105120 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 8.4e-41 170.2 95 86.3
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 1.4e-40 169.5 95 86.3
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 1.9e-40 169.1 95 86.3
BraSC48t46281Z Brassica rapa HOM05D001560 ORTHO05D003613 1.9e-40 169.1 95 86.3
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 1.9e-40 169.1 95 86.3
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 1.9e-40 169.1 95 86.3
CARHR287190 Cardamine hirsuta HOM05D001560 ORTHO05D003613 1.9e-40 169.1 95 86.3
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 1.9e-40 169.1 98 84.7
SHI38214 Sapria himalayana HOM05D001560 ORTHO05D003613 4.2e-40 167.9 108 79.6
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 7.1e-40 167.2 95 85.3
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 1.2e-39 166.4 95 86.3
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 1.6e-39 166.0 95 85.3
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 3.5e-39 164.9 95 85.3
CAN.G623.2 Capsicum annuum HOM05D001560 ORTHO05D003613 3.5e-39 164.9 95 85.3
unitig_87.g27957 Utricularia gibba HOM05D001560 ORTHO05D003613 3.5e-39 164.9 95 85.3
Hund12886 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.6e-39 164.5 95 84.2
Hund27586 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.6e-39 164.5 95 84.2
Hund27816 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.6e-39 164.5 95 84.2
Hund27900 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.6e-39 164.5 95 84.2
Hund28069 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.6e-39 164.5 95 84.2
Hund28082 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.6e-39 164.5 95 84.2
Hund28866 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.6e-39 164.5 95 84.2
Hund28883 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.6e-39 164.5 95 84.2
Hund29084 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.6e-39 164.5 95 84.2
CsaV3_UNG210420 Cucumis sativus L. HOM05D001560 ORTHO05D003613 6.0e-39 164.1 95 85.3
Hund29205 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.3e-38 162.9 95 83.2
Sopen11g018210 Solanum pennellii HOM05D001560 ORTHO05D003613 1.3e-38 162.9 95 84.2
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 1.8e-38 162.5 95 84.2
AUR62038665 Chenopodium quinoa HOM05D001560 ORTHO05D003613 1.8e-38 162.5 95 82.1
HanXRQChr01g0012841 Helianthus annuus HOM05D001560 ORTHO05D003613 1.8e-38 162.5 95 84.2
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 3.9e-38 161.4 95 83.2
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 3.9e-38 161.4 95 83.2
Sc04g0005570 Simmondsia chinensis HOM05D001560 ORTHO05D003613 3.9e-38 161.4 95 84.2
GSVIVG01006203001 Vitis vinifera HOM05D001560 ORTHO05D003613 6.7e-38 160.6 95 82.1
Lsat_1_v5_gn_6_108960 Lactuca sativa HOM05D001560 ORTHO05D003613 4.3e-37 157.9 95 80.0
Potri.007G062302 Populus trichocarpa HOM05D001560 ORTHO05D003613 1.3e-36 156.4 95 81.1
SabraMtG0009600 Salix brachista HOM05D001560 ORTHO05D003613 1.3e-36 156.4 95 81.1
PSO675G8388 Papaver somniferum HOM05D001560 ORTHO05D003613 9.0e-35 150.2 95 78.9
SHI36584 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-34 149.8 83 86.7
Sed0013276 Sechium edule HOM05D001560 ORTHO05D003613 1.5e-34 149.4 88 83.0
Sp3g25920 Schrenkiella parvula HOM05D001560 ORTHO05D003613 3.4e-34 148.3 95 78.9
Peaxi162Scf00348g00514 Petunia axillaris HOM05D001560 ORTHO05D003613 5.0e-33 144.4 95 76.8
SHI39096 Sapria himalayana HOM05D001560 ORTHO05D003613 2.7e-31 138.7 91 75.8
SHI44217 Sapria himalayana HOM05D001560 ORTHO05D003613 4.6e-31 137.9 91 75.8
CAN.G1321.15 Capsicum annuum HOM05D001560 ORTHO05D003613 3.0e-30 135.2 80 83.8
SEGI_16710 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 3.0e-30 135.2 97 71.1
SEGI_26668 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 8.8e-30 133.7 97 70.1
Solyc09g056070.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 5.7e-29 131.0 94 69.1
ClCG10G004710 Citrullus lanatus HOM05D001560 ORTHO05D003613 2.8e-28 128.6 77 83.1
Nitab4.5_0000307g0350 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.2e-26 123.2 95 65.3
Nitab4.5_0000886g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.5e-26 122.9 95 65.3
Nitab4.5_0001152g1090 Nicotiana tabacum HOM05D001560 ORTHO05D003613 5.9e-26 120.9 95 67.4
SHI51797 Sapria himalayana HOM05D001560 ORTHO05D003613 3.8e-25 118.2 58 94.8
arahy.Tifrunner.gnm1.ann1.K9CWE8 Arachis hypogaea HOM05D001560 ORTHO05D003613 1.1e-24 116.7 68 80.9
SHI54049 Sapria himalayana HOM05D001560 ORTHO05D003613 1.4e-24 116.3 58 94.8
Nn4g26010 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.9e-24 115.9 65 86.2
CSS0014898 Camellia sinensis var. sinensis HOM05D001560 ORTHO05D003613 9.4e-24 113.6 66 83.3
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 2.1e-23 112.5 65 80.0
Hund12883 Selenicereus undatus HOM05D001560 ORTHO05D003613 6.7e-22 107.5 81 66.7
SHI27345 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-21 106.3 58 87.9
Sed0003843 Sechium edule HOM05D001560 ORTHO05D003613 9.7e-21 103.6 68 77.9
SHI49510 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-20 103.2 52 92.3
SHI53219 Sapria himalayana HOM05D001560 ORTHO05D003613 1.4e-16 89.7 45 93.3
SHI43894 Sapria himalayana HOM05D001560 ORTHO05D003613 1.9e-16 89.4 46 91.3
Pp3c23_18180 Physcomitrium patens HOM05D001560 ORTHO05D003613 4.2e-16 88.2 93 45.2
AagrBONN_evm.TU.Sc2ySwM_344.1486 Anthoceros agrestis HOM05D001560 ORTHO05D003613 7.2e-16 87.4 87 48.3
Solyc01g011060.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.0e-14 83.6 95 50.5
ClCG04G001510 Citrullus lanatus HOM05D001560 ORTHO05D003613 8.8e-14 80.5 68 63.2
Solyc11g030900.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 2.0e-13 79.3 104 44.2
arahy.Tifrunner.gnm1.ann1.7G246T Arachis hypogaea HOM05D001560 ORTHO05D003613 3.3e-13 78.6 43 83.7
CAN.G505.5 Capsicum annuum HOM05D001560 ORTHO05D003613 4.4e-13 78.2 56 67.9
arahy.Tifrunner.gnm1.ann1.JTWL6Q Arachis hypogaea HOM05D001560 ORTHO05D003613 2.8e-12 75.5 35 97.1
HanXRQChr09g0251121 Helianthus annuus HOM05D001560 ORTHO05D003613 2.8e-12 75.5 36 94.4
Nitab4.5_0000280g0190 Nicotiana tabacum HOM05D001560 ORTHO05D003613 4.8e-12 74.7 53 69.8
Pp3c13_4900 Physcomitrium patens HOM05D001560 ORTHO05D003613 3.5e-10 68.6 90 43.3
Lalb_Chr02g0142191 Lupinus albus HOM05D003614 ORTHO05D004156 3.8e-09 65.1 96 34.4
Glyma.16G222000 Glycine max HOM05D003614 ORTHO05D004156 5.0e-09 64.7 92 37.0
Pp3c2_31660 Physcomitrium patens HOM05D001560 ORTHO05D003613 5.0e-09 64.7 85 37.6
VMungo0331G0942 Vigna mungo HOM05D003614 ORTHO05D004156 6.5e-09 64.3 92 35.9
Glyma.16G116350 Glycine max HOM05D003614 ORTHO05D004156 8.5e-09 63.9 92 37.0
Psat6g087880 Pisum sativum HOM05D003614 ORTHO05D004156 1.1e-08 63.5 92 37.0
VMungo0720G1667 Vigna mungo HOM05D003614 ORTHO05D004156 1.5e-08 63.2 92 35.9
Atru.chr1.1276 Acer truncatum HOM05D003614 ORTHO05D004156 7.2e-08 60.8 95 32.6
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 7.2e-08 60.8 64 51.6
TPR.G13793 Trifolium pratense HOM05D003614 ORTHO05D004156 7.2e-08 60.8 92 35.9
CANSAT54G1064 Cannabis sativa HOM05D003614 ORTHO05D004156 9.4e-08 60.5 95 32.6
Lsat_1_v5_gn_5_158800 Lactuca sativa HOM05D003614 ORTHO05D004156 9.4e-08 60.5 95 34.7
arahy.Tifrunner.gnm1.ann1.MR16VB Arachis hypogaea HOM05D003614 ORTHO05D004156 1.2e-07 60.1 92 35.9
arahy.Tifrunner.gnm1.ann1.P66LNP Arachis hypogaea HOM05D003614 ORTHO05D004156 1.2e-07 60.1 92 35.9
MD12G1089700 Malus domestica HOM05D003614 ORTHO05D004156 1.2e-07 60.1 95 31.6
Potri.006G043650 Populus trichocarpa HOM05D003614 ORTHO05D004156 1.2e-07 60.1 95 31.6
ATR0580G046 Amborella trichopoda HOM05D003614 ORTHO05D004156 1.6e-07 59.7 95 33.7
FAN02G3060 Fragaria x ananassa HOM05D003614 ORTHO05D004156 1.6e-07 59.7 67 40.3
SGA_v2.0_scaffold94G28503 Striga asiatica HOM05D003614 ORTHO05D004156 1.6e-07 59.7 96 32.3
unitig_748.g7231 Utricularia gibba HOM05D003614 ORTHO05D004156 1.6e-07 59.7 92 34.8
CDE02G0303 Ceratophyllum demersum HOM05D001560 ORTHO05D003613 2.1e-07 59.3 28 96.4
Prupe.7G047200 Prunus persica HOM05D003614 ORTHO05D004156 2.1e-07 59.3 67 40.3
Sabra06G0029800 Salix brachista HOM05D003614 ORTHO05D004156 2.1e-07 59.3 95 31.6
HanXRQChr13g0395821 Helianthus annuus HOM05D003614 ORTHO05D004156 2.7e-07 58.9 95 31.6
Ca_02700_v3 Cicer arietinum L. HOM05D003614 ORTHO05D004156 3.6e-07 58.5 92 32.6
FvH4_6g25070 Fragaria vesca HOM05D003614 ORTHO05D004156 3.6e-07 58.5 67 38.8
FAN09G2704 Fragaria x ananassa HOM05D003614 ORTHO05D004156 3.6e-07 58.5 67 38.8
FAN14G1287 Fragaria x ananassa HOM05D003614 ORTHO05D004156 3.6e-07 58.5 67 38.8
DCAR_016966 Daucus carota HOM05D003614 ORTHO05D004156 4.7e-07 58.2 92 32.6
Manes.08G056200 Manihot esculenta HOM05D003614 ORTHO05D004156 4.7e-07 58.2 92 32.6
TWI74G0330 Tripterygium wilfordii HOM05D003614 ORTHO05D004156 6.1e-07 57.8 95 30.5
CSS0031196 Camellia sinensis var. sinensis HOM05D003614 ORTHO05D004156 8.0e-07 57.4 95 30.5
CAN.G745.35 Capsicum annuum HOM05D001560 ORTHO05D003613 8.0e-07 57.4 27 96.3
Oeu008197.1 Olea europaea HOM05D003614 ORTHO05D004156 8.0e-07 57.4 67 40.3
Peaxi162Scf00622g00016 Petunia axillaris HOM05D001560 ORTHO05D003613 8.0e-07 57.4 27 96.3
AL6G13670 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 1.0e-06 57.0 92 32.6
ECA248G3258 Erigeron canadensis HOM05D003614 ORTHO05D004156 1.0e-06 57.0 95 29.5
RcHm_v2.0_Chr2g0124831 Rosa chinensis HOM05D003614 ORTHO05D004156 1.0e-06 57.0 59 42.4
Aa31LG1G21260 Aethionema arabicum HOM05D003614 ORTHO05D004156 1.4e-06 56.6 95 30.5
AUR62037179 Chenopodium quinoa HOM05D003614 ORTHO05D004156 1.4e-06 56.6 95 29.5
Duzib128G0580 Durio zibethinus HOM05D003614 ORTHO05D004156 1.4e-06 56.6 67 37.3
SHI03570 Sapria himalayana HOM05D003614 ORTHO05D004156 1.4e-06 56.6 92 32.6
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 1.4e-06 56.6 28 96.4
AagrBONN_evm.TU.Sc2ySwM_117.1402 Anthoceros agrestis HOM05D001806 ORTHO05D002069 1.8e-06 56.2 93 33.3
Carub.0006s0300 Capsella rubella HOM05D003614 ORTHO05D004156 1.8e-06 56.2 92 33.7
Thhalv10012522m.g Eutrema salsugineum HOM05D003614 ORTHO05D004156 1.8e-06 56.2 95 31.6
Lj1P1115T19 Lonicera japonica HOM05D003614 ORTHO05D004156 1.8e-06 56.2 96 29.2
QL11p043104 Quercus lobata HOM05D003614 ORTHO05D004156 1.8e-06 56.2 92 31.5
Solyc03g033520.2 Solanum lycopersicum HOM05D003614 ORTHO05D004156 1.8e-06 56.2 95 31.6
ClCG10G005410 Citrullus lanatus HOM05D003614 ORTHO05D004156 2.3e-06 55.8 96 29.2
Nitab4.5_0005031g0070 Nicotiana tabacum HOM05D003614 ORTHO05D004156 2.3e-06 55.8 95 32.6
QL07p006290 Quercus lobata HOM05D003614 ORTHO05D004156 2.3e-06 55.8 67 37.3
Sed0022963 Sechium edule HOM05D003614 ORTHO05D004156 2.3e-06 55.8 95 30.5
Zm00001eb274760 Zea mays HOM05D003614 ORTHO05D004156 2.3e-06 55.8 95 29.5
Cpa.g.sc161.31 Carica papaya HOM05D003614 ORTHO05D004156 3.0e-06 55.5 95 31.6
COL.COLO4_33914 Corchorus olitorius HOM05D003614 ORTHO05D004156 3.0e-06 55.5 59 40.7
CsaV3_3G005150 Cucumis sativus L. HOM05D003614 ORTHO05D004156 3.0e-06 55.5 96 29.2
Sopen03g006270 Solanum pennellii HOM05D003614 ORTHO05D004156 3.0e-06 55.5 95 31.6
Ah.13g076640 Amaranthus hybridus HOM05D003614 ORTHO05D004156 4.0e-06 55.1 95 29.5
MBI14_g19444_MAGBIO Magnolia biondii HOM05D003614 ORTHO05D004156 4.0e-06 55.1 64 39.1
Nn1g04314 Nelumbo nucifera HOM05D003614 ORTHO05D004156 4.0e-06 55.1 95 31.6
PGR142G0250 Punica granatum HOM05D003614 ORTHO05D004156 4.0e-06 55.1 64 39.1
SHI34998 Sapria himalayana HOM05D001560 ORTHO05D003613 4.0e-06 55.1 28 92.9
Sc13g0001410 Simmondsia chinensis HOM05D003614 ORTHO05D004156 4.0e-06 55.1 95 27.4
TAR580G0003 Trochodendron aralioides HOM05D003614 ORTHO05D004156 5.2e-06 54.7 95 29.5
EL10Ac3g07183 Beta vulgaris HOM05D003614 ORTHO05D004156 6.7e-06 54.3 95 28.4
BcaC06g32109 Brassica carinata HOM05D003614 ORTHO05D004156 6.7e-06 54.3 64 37.5
C09p72780 Brassica napus HOM05D003614 ORTHO05D004156 6.7e-06 54.3 64 37.5
BolC9t60016H Brassica oleracea HOM05D003614 ORTHO05D004156 6.7e-06 54.3 64 37.5
Nitab4.5_0010525g0010 Nicotiana tabacum HOM05D003614 ORTHO05D004156 6.7e-06 54.3 95 30.5
Aqoxy5G04186 Aquilegia oxysepala HOM05D003614 ORTHO05D004156 8.8e-06 53.9 95 30.5
BraA10t45251Z Brassica rapa HOM05D003614 ORTHO05D004156 8.8e-06 53.9 64 37.5
PSO017G5444 Papaver somniferum HOM05D003614 ORTHO05D004156 8.8e-06 53.9 95 31.6


User provided reference genes

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