Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI54776 Sapria himalayana HOM05D002864 ORTHO05D007972 1.5e-25 118.6 57 100.0
SHI50326 Sapria himalayana HOM05D002864 ORTHO05D007972 1.4e-23 112.1 55 96.4
SHI54530 Sapria himalayana HOM05D002864 ORTHO05D007972 1.4e-23 112.1 55 96.4
Aa31csc705G10 Aethionema arabicum HOM05D002864 ORTHO05D007972 2.5e-23 111.3 57 87.7
Gorai.001G162000 Gossypium raimondii HOM05D002864 ORTHO05D007972 2.5e-23 111.3 57 89.5
Lalb_Chr00c06g0404551 Lupinus albus HOM05D002864 ORTHO05D007972 2.5e-23 111.3 57 89.5
Lalb_Chr00c21g0405421 Lupinus albus HOM05D002864 ORTHO05D007972 2.5e-23 111.3 57 89.5
Lalb_Chr00c24g0407141 Lupinus albus HOM05D002864 ORTHO05D007972 2.5e-23 111.3 57 89.5
Lalb_Chr11g0070121 Lupinus albus HOM05D002864 ORTHO05D007972 2.5e-23 111.3 57 89.5
PGR028G0001 Punica granatum HOM05D002864 ORTHO05D007972 4.2e-23 110.5 57 87.7
unitig_87.g28007 Utricularia gibba HOM05D002864 ORTHO05D007972 4.2e-23 110.5 57 87.7
Hma1.2p1_0676F.1_g201980 Hydrangea macrophylla HOM05D002864 ORTHO05D007972 9.3e-23 109.4 57 87.7
Nn1g09936 Nelumbo nucifera HOM05D002864 ORTHO05D007972 9.3e-23 109.4 57 87.7
Nn1g10178 Nelumbo nucifera HOM05D002864 ORTHO05D007972 9.3e-23 109.4 57 87.7
VMungo0647G2443 Vigna mungo HOM05D002864 ORTHO05D007972 9.3e-23 109.4 57 86.0
AT2G07727 Arabidopsis thaliana HOM05D002864 ORTHO05D007972 1.2e-22 109.0 57 86.0
ATMG00220 Arabidopsis thaliana HOM05D002864 ORTHO05D007972 1.2e-22 109.0 57 86.0
A04p09430 Brassica napus HOM05D002864 ORTHO05D007972 1.2e-22 109.0 57 86.0
BolSC28t60373H Brassica oleracea HOM05D002864 ORTHO05D007972 1.2e-22 109.0 57 86.0
BraSC159t45732Z Brassica rapa HOM05D002864 ORTHO05D007972 1.2e-22 109.0 57 86.0
BraSC48t46333Z Brassica rapa HOM05D002864 ORTHO05D007972 1.2e-22 109.0 57 86.0
CAN.G1321.7 Capsicum annuum HOM05D002864 ORTHO05D007972 1.2e-22 109.0 57 87.7
CAN.G539.2 Capsicum annuum HOM05D002864 ORTHO05D007972 1.2e-22 109.0 57 87.7
Thhalv10001270m.g Eutrema salsugineum HOM05D002864 ORTHO05D007972 1.2e-22 109.0 57 86.0
SabraMtG0009000 Salix brachista HOM05D002864 ORTHO05D007972 1.2e-22 109.0 57 87.7
Zm00001eb126090 Zea mays HOM05D002864 ORTHO05D007972 1.2e-22 109.0 57 87.7
Zm00001eb187520 Zea mays HOM05D002864 ORTHO05D007972 1.2e-22 109.0 57 87.7
Zm00001eb436400 Zea mays HOM05D002864 ORTHO05D007972 1.2e-22 109.0 57 87.7
Zm00001eb438850 Zea mays HOM05D002864 ORTHO05D007972 1.2e-22 109.0 57 87.7
Zm00001eb440640 Zea mays HOM05D002864 ORTHO05D007972 1.2e-22 109.0 57 87.7
CANSAT16G0027 Cannabis sativa HOM05D002864 ORTHO05D007972 1.6e-22 108.6 57 86.0
Peaxi162Scf00296g00719 Petunia axillaris HOM05D002864 ORTHO05D007972 2.1e-22 108.2 57 89.5
Solyc09g050020.3 Solanum lycopersicum HOM05D002864 ORTHO05D007972 3.5e-22 107.5 57 86.0
RcHm_v2.0_MTg0499071 Rosa chinensis HOM05D002864 ORTHO05D007972 6.0e-22 106.7 57 86.0
Psat6g041400 Pisum sativum HOM05D002864 ORTHO05D007972 7.9e-22 106.3 57 86.0
Sed0001516 Sechium edule HOM05D002864 ORTHO05D007972 1.0e-21 105.9 57 86.0
CsaV3_UNG209910 Cucumis sativus L. HOM05D002864 ORTHO05D007972 2.3e-21 104.8 57 86.0
HanXRQMTg0579511 Helianthus annuus HOM05D002864 ORTHO05D007972 2.3e-21 104.8 57 82.5
LjContig00315g0014259 Lotus japonicus HOM05D002864 ORTHO05D007972 2.3e-21 104.8 55 85.5
LjContig00439g0009771 Lotus japonicus HOM05D002864 ORTHO05D007972 2.3e-21 104.8 55 85.5
LjContig00446g0017432 Lotus japonicus HOM05D002864 ORTHO05D007972 2.3e-21 104.8 55 85.5
DCAR_032458 Daucus carota HOM05D002864 ORTHO05D007972 8.2e-19 96.3 57 78.9
Nitab4.5_0029129g0010 Nicotiana tabacum HOM05D002864 ORTHO05D007972 1.1e-18 95.9 57 80.7
Nitab4.5_0004300g0130 Nicotiana tabacum HOM05D002864 ORTHO05D007972 2.6e-17 91.3 54 79.6
AT2G07718 Arabidopsis thaliana HOM05D014754 ORTHO05D017434 1.9e-15 85.1 62 64.5
ATMG00590 Arabidopsis thaliana HOM05D014754 ORTHO05D017434 1.9e-15 85.1 62 64.5
Solyc00g500240.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 3.2e-15 84.3 44 84.1
Solyc00g500364.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 3.2e-15 84.3 44 84.1
CARHR282960 Cardamine hirsuta HOM05D014754 ORTHO05D017434 5.5e-15 83.6 41 87.8
TPR.G36555 Trifolium pratense HOM05D002864 ORTHO05D007972 1.1e-12 75.9 37 86.5
SHI26646 Sapria himalayana HOM05D002864 ORTHO05D007972 2.5e-12 74.7 36 88.9
Oeu043609.1 Olea europaea HOM05D002864 ORTHO05D007972 1.1e-10 69.3 56 58.9
SMO053G0012 Selaginella moellendorffii HOM05D002864 ORTHO05D007972 4.1e-10 67.4 52 61.5
EL10Ac5g12272 Beta vulgaris HOM05D002864 ORTHO05D007972 9.4e-07 56.2 35 60.0


User provided reference genes

Program Settings