Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI54636 Sapria himalayana HOM05D005304 ORTHO05D004438 2.3e-117 425.6 221 100.0
Sabra08G0019800 Salix brachista HOM05D005304 ORTHO05D004438 9.2e-18 94.7 71 60.6
Potri.008G029600 Populus trichocarpa HOM05D005304 ORTHO05D004438 7.8e-17 91.7 75 54.7
PGR044G1405 Punica granatum HOM05D005304 ORTHO05D004438 3.9e-16 89.4 87 48.3
Potri.010G231600 Populus trichocarpa HOM05D005304 ORTHO05D004438 1.1e-15 87.8 70 58.6
Nn6g35176 Nelumbo nucifera HOM05D005304 ORTHO05D004438 4.7e-14 82.4 98 46.9
Gorai.009G307700 Gossypium raimondii HOM05D005304 ORTHO05D004438 1.1e-13 81.3 81 56.8
Lalb_Chr02g0151151 Lupinus albus HOM05D005304 ORTHO05D004438 1.4e-13 80.9 68 55.9
Sabra10G0179600 Salix brachista HOM05D005304 ORTHO05D004438 1.8e-13 80.5 69 55.1
Ca_10460_v3 Cicer arietinum L. HOM05D005304 ORTHO05D004438 2.3e-13 80.1 74 54.1
Phvul.007G141600 Phaseolus vulgaris HOM05D005304 ORTHO05D004438 4.0e-13 79.3 72 52.8
TPR.G37843 Trifolium pratense HOM05D005304 ORTHO05D004438 8.9e-13 78.2 67 58.2
Lalb_Chr03g0036331 Lupinus albus HOM05D005304 ORTHO05D004438 1.2e-12 77.8 77 55.8
Manes.07G093500 Manihot esculenta HOM05D005304 ORTHO05D004438 1.2e-12 77.8 73 49.3
Duzib128G0830 Durio zibethinus HOM05D005304 ORTHO05D004438 2.0e-12 77.0 84 50.0
Medtr1g090837 Medicago truncatula HOM05D005304 ORTHO05D004438 2.0e-12 77.0 67 58.2
TAR369G0323 Trochodendron aralioides HOM05D001401 ORTHO05D002222 2.0e-12 77.0 66 56.1
RcHm_v2.0_Chr1g0336411 Rosa chinensis HOM05D005304 ORTHO05D004438 2.6e-12 76.6 93 45.2
TAR623G1332 Trochodendron aralioides HOM05D005304 ORTHO05D004438 2.6e-12 76.6 93 44.1
TAR633G0523 Trochodendron aralioides HOM05D005304 ORTHO05D004438 2.6e-12 76.6 83 47.0
Duzib128G0918 Durio zibethinus HOM05D005304 ORTHO05D004438 3.4e-12 76.3 84 47.6
Gohir.A05G290700 Gossypium hirsutum HOM05D005304 ORTHO05D004438 4.4e-12 75.9 82 53.7
Gohir.D05G291900 Gossypium hirsutum HOM05D005304 ORTHO05D004438 4.4e-12 75.9 80 55.0
FvH4_7g06790 Fragaria vesca HOM05D005304 ORTHO05D004438 5.8e-12 75.5 89 44.9
FAN06G1004 Fragaria x ananassa HOM05D005304 ORTHO05D004438 5.8e-12 75.5 89 44.9
FAN10G3090 Fragaria x ananassa HOM05D005304 ORTHO05D004438 5.8e-12 75.5 89 44.9
Duzib114G0655 Durio zibethinus HOM05D005304 ORTHO05D004438 7.6e-12 75.1 57 63.2
FAN03G1417 Fragaria x ananassa HOM05D005304 ORTHO05D004438 7.6e-12 75.1 94 47.9
QL08p052941 Quercus lobata HOM05D005304 ORTHO05D004438 7.6e-12 75.1 54 59.3
Lj5g0009089 Lotus japonicus HOM05D005304 ORTHO05D004438 1.3e-11 74.3 67 55.2
VMungo0720G0262 Vigna mungo HOM05D005304 ORTHO05D004438 1.3e-11 74.3 99 44.4
CiPaw.02G169800 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.7e-11 73.9 80 50.0
Lalb_Chr06g0170051 Lupinus albus HOM05D005304 ORTHO05D004438 1.7e-11 73.9 70 51.4
TWI38G0392 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 1.7e-11 73.9 75 52.0
Sed0018085 Sechium edule HOM05D005304 ORTHO05D004438 2.9e-11 73.2 86 50.0
Atru.chr12.921 Acer truncatum HOM05D005304 ORTHO05D004438 3.8e-11 72.8 84 47.6
Gohir.A05G393600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 3.8e-11 72.8 74 56.8
Manes.10G053200 Manihot esculenta HOM05D005304 ORTHO05D004438 3.8e-11 72.8 65 56.9
Psat6g173960 Pisum sativum HOM05D005304 ORTHO05D004438 3.8e-11 72.8 104 43.3
TAR636G3524 Trochodendron aralioides HOM05D005304 ORTHO05D004438 3.8e-11 72.8 101 41.6
Glyma.10G199500 Glycine max HOM05D005304 ORTHO05D004438 4.9e-11 72.4 67 55.2
Rhsim03G0110900 Rhododendron simsii HOM05D005304 ORTHO05D004438 4.9e-11 72.4 62 53.2
Gohir.D04G021300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 6.4e-11 72.0 74 56.8
Gorai.012G025400 Gossypium raimondii HOM05D005304 ORTHO05D004438 6.4e-11 72.0 74 56.8
Thecc.10G090600 Theobroma cacao HOM05D005304 ORTHO05D004438 6.4e-11 72.0 81 48.1
FAN01G2164 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.1e-10 71.2 94 46.8
CiPaw.01G264700 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.4e-10 70.9 54 55.6
Prupe.6G114400 Prunus persica HOM05D005304 ORTHO05D004438 1.9e-10 70.5 91 41.8
COL.COLO4_32872 Corchorus olitorius HOM05D005304 ORTHO05D004438 2.4e-10 70.1 107 38.3
MSTRG.27507 Avicennia marina HOM05D005304 ORTHO05D004438 4.1e-10 69.3 61 47.5
QL03p021677 Quercus lobata HOM05D005304 ORTHO05D004438 4.1e-10 69.3 92 42.4
CSS0003867 Camellia sinensis var. sinensis HOM05D017072 ORTHO05D004438 5.4e-10 68.9 73 47.9
Cfa001771 Carpinus fangiana HOM05D005304 ORTHO05D004438 5.4e-10 68.9 56 57.1
ClCG08G007940 Citrullus lanatus HOM05D005304 ORTHO05D004438 5.4e-10 68.9 86 47.7
MELO3C019852.2 Cucumis melo HOM05D005304 ORTHO05D004438 5.4e-10 68.9 97 41.2
Gohir.A01G128800 Gossypium hirsutum HOM05D005304 ORTHO05D004438 5.4e-10 68.9 68 54.4
Nn2g13894 Nelumbo nucifera HOM05D005304 ORTHO05D004438 5.4e-10 68.9 93 43.0
QL03p011649 Quercus lobata HOM05D005304 ORTHO05D004438 5.4e-10 68.9 54 55.6
Sed0010031 Sechium edule HOM05D005304 ORTHO05D004438 5.4e-10 68.9 86 44.2
Haze_16785 Corylus avellana HOM05D005304 ORTHO05D004438 9.2e-10 68.2 73 52.1
Gohir.D01G118400 Gossypium hirsutum HOM05D005304 ORTHO05D004438 9.2e-10 68.2 68 54.4
Gorai.002G144400 Gossypium raimondii HOM05D005304 ORTHO05D004438 9.2e-10 68.2 68 54.4
CsaV3_2G032750 Cucumis sativus L. HOM05D005304 ORTHO05D004438 1.2e-09 67.8 81 45.7
Eucgr.G02732 Eucalyptus grandis HOM05D005304 ORTHO05D004438 2.7e-09 66.6 93 44.1
FAN10G0320 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.7e-09 66.6 76 47.4
Ciclev10033091m.g Citrus clementina HOM05D005304 ORTHO05D004438 3.5e-09 66.2 70 50.0
TWI63G0695 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 3.5e-09 66.2 69 49.3
Eucgr.J01033 Eucalyptus grandis HOM05D005304 ORTHO05D004438 4.6e-09 65.9 59 50.8
FAN12G4274 Fragaria x ananassa HOM05D005304 ORTHO05D004438 6.0e-09 65.5 94 42.6
Prupe.2G095100 Prunus persica HOM05D005304 ORTHO05D004438 6.0e-09 65.5 72 51.4
CANSAT56G0274 Cannabis sativa HOM05D005304 ORTHO05D004438 7.8e-09 65.1 71 52.1
Potri.010G231700 Populus trichocarpa HOM05D005304 ORTHO05D004438 7.8e-09 65.1 56 55.4
Aqoxy2G01602 Aquilegia oxysepala HOM05D005304 ORTHO05D004438 1.0e-08 64.7 58 53.4
FAN02G4580 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.3e-08 64.3 78 46.2
Glyma.20G190800 Glycine max HOM05D005304 ORTHO05D004438 1.3e-08 64.3 116 37.1
Manes.10G053300 Manihot esculenta HOM05D005304 ORTHO05D004438 1.3e-08 64.3 59 55.9
ClCG05G021460 Citrullus lanatus HOM05D005304 ORTHO05D004438 1.7e-08 63.9 54 50.0
PGR044G0041 Punica granatum HOM05D005304 ORTHO05D004438 1.7e-08 63.9 67 52.2
Manes.11G153500 Manihot esculenta HOM05D005304 ORTHO05D004438 2.3e-08 63.5 76 44.7
Gohir.D07G109600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 6.6e-08 62.0 60 46.7
Lalb_Chr19g0129331 Lupinus albus HOM05D005304 ORTHO05D004438 8.6e-08 61.6 62 54.8
Nitab4.5_0000593g0370 Nicotiana tabacum HOM05D005304 ORTHO05D004438 8.6e-08 61.6 68 45.6
Gohir.A07G105600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.1e-07 61.2 59 47.5
Gohir.A05G084500 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.5e-07 60.8 76 40.8
MELO3C012381.2 Cucumis melo HOM05D005304 ORTHO05D004438 1.9e-07 60.5 64 43.8
Gohir.D05G087300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.9e-07 60.5 76 39.5
Gorai.009G089100 Gossypium raimondii HOM05D005304 ORTHO05D004438 1.9e-07 60.5 76 39.5
Lsat_1_v5_gn_9_70641 Lactuca sativa HOM05D005304 ORTHO05D004438 1.9e-07 60.5 65 41.5
Gorai.001G117700 Gossypium raimondii HOM05D005304 ORTHO05D004438 2.5e-07 60.1 60 45.0
Lsat_1_v5_gn_8_22700 Lactuca sativa HOM05D005304 ORTHO05D004438 3.3e-07 59.7 92 35.9
Oeu059829.1 Olea europaea HOM05D005304 ORTHO05D004438 3.3e-07 59.7 54 44.4
Migut.F01894 Erythranthe guttata HOM05D005304 ORTHO05D004438 4.3e-07 59.3 55 43.6
Sabra08G0019700 Salix brachista HOM05D005304 ORTHO05D004438 4.3e-07 59.3 60 48.3
SalBow4G2705 Salvia bowleyana HOM05D005304 ORTHO05D004438 4.3e-07 59.3 57 43.9
CSS0034177 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 5.6e-07 58.9 75 40.0
Duzib168G0406 Durio zibethinus HOM05D005304 ORTHO05D004438 5.6e-07 58.9 73 41.1
Nitab4.5_0001163g0010 Nicotiana tabacum HOM05D005304 ORTHO05D004438 5.6e-07 58.9 57 49.1
Solyc03g071710.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 5.6e-07 58.9 56 46.4
Sopen03g019970 Solanum pennellii HOM05D005304 ORTHO05D004438 5.6e-07 58.9 56 46.4
PGSC0003DMG400016914 Solanum tuberosum HOM05D005304 ORTHO05D004438 5.6e-07 58.9 56 46.4
TWI79G0532 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 5.6e-07 58.9 58 46.6
CsaV3_5G035790 Cucumis sativus L. HOM05D005304 ORTHO05D004438 7.3e-07 58.5 60 43.3
Duzib150G0717 Durio zibethinus HOM05D005304 ORTHO05D004438 7.3e-07 58.5 90 38.9
PGR119G0321 Punica granatum HOM05D005304 ORTHO05D004438 7.3e-07 58.5 73 45.2
Nitab4.5_0000107g0230 Nicotiana tabacum HOM05D005304 ORTHO05D004438 9.6e-07 58.2 76 39.5
QL01p014739 Quercus lobata HOM05D005304 ORTHO05D004438 9.6e-07 58.2 109 33.9
Ciclev10029845m.g Citrus clementina HOM05D005304 ORTHO05D004438 1.2e-06 57.8 121 30.6
Cpa.g.sc128.74 Carica papaya HOM05D005304 ORTHO05D004438 1.6e-06 57.4 70 47.1
Oeu032435.1 Olea europaea HOM05D005304 ORTHO05D004438 1.6e-06 57.4 72 36.1
ClCG01G013950 Citrullus lanatus HOM05D026992 ORTHO05D004438 2.8e-06 56.6 86 37.2
CAN.G612.11 Capsicum annuum HOM05D005304 ORTHO05D004438 3.6e-06 56.2 69 40.6
RcHm_v2.0_Chr5g0056381 Rosa chinensis HOM05D025255 ORTHO05D004438 4.7e-06 55.8 74 44.6
Sed0009329 Sechium edule HOM05D005304 ORTHO05D004438 4.7e-06 55.8 53 43.4
CSS0028161 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 8.1e-06 55.1 58 46.6
Ciclev10033003m.g Citrus clementina HOM05D005304 ORTHO05D004438 8.1e-06 55.1 80 40.0
Eucgr.B03916 Eucalyptus grandis HOM05D005304 ORTHO05D004438 8.1e-06 55.1 80 43.8
Potri.009G003400 Populus trichocarpa HOM05D005304 ORTHO05D004438 8.1e-06 55.1 87 40.2


User provided reference genes

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