Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI50326 Sapria himalayana HOM05D002864 ORTHO05D007972 9.6e-25 115.9 55 100.0
SHI54530 Sapria himalayana HOM05D002864 ORTHO05D007972 9.6e-25 115.9 55 100.0
SHI54776 Sapria himalayana HOM05D002864 ORTHO05D007972 8.1e-24 112.8 55 96.4
Gorai.001G162000 Gossypium raimondii HOM05D002864 ORTHO05D007972 1.1e-23 112.5 55 92.7
Lalb_Chr00c06g0404551 Lupinus albus HOM05D002864 ORTHO05D007972 1.1e-23 112.5 55 92.7
Lalb_Chr00c21g0405421 Lupinus albus HOM05D002864 ORTHO05D007972 1.1e-23 112.5 55 92.7
Lalb_Chr00c24g0407141 Lupinus albus HOM05D002864 ORTHO05D007972 1.1e-23 112.5 55 92.7
Lalb_Chr11g0070121 Lupinus albus HOM05D002864 ORTHO05D007972 1.1e-23 112.5 55 92.7
PGR028G0001 Punica granatum HOM05D002864 ORTHO05D007972 1.8e-23 111.7 55 90.9
unitig_87.g28007 Utricularia gibba HOM05D002864 ORTHO05D007972 1.8e-23 111.7 55 90.9
Hma1.2p1_0676F.1_g201980 Hydrangea macrophylla HOM05D002864 ORTHO05D007972 4.0e-23 110.5 55 90.9
Nn1g09936 Nelumbo nucifera HOM05D002864 ORTHO05D007972 4.0e-23 110.5 55 90.9
Nn1g10178 Nelumbo nucifera HOM05D002864 ORTHO05D007972 4.0e-23 110.5 55 90.9
VMungo0647G2443 Vigna mungo HOM05D002864 ORTHO05D007972 4.0e-23 110.5 55 89.1
AT2G07727 Arabidopsis thaliana HOM05D002864 ORTHO05D007972 5.3e-23 110.2 55 89.1
ATMG00220 Arabidopsis thaliana HOM05D002864 ORTHO05D007972 5.3e-23 110.2 55 89.1
A04p09430 Brassica napus HOM05D002864 ORTHO05D007972 5.3e-23 110.2 55 89.1
BolSC28t60373H Brassica oleracea HOM05D002864 ORTHO05D007972 5.3e-23 110.2 55 89.1
BraSC159t45732Z Brassica rapa HOM05D002864 ORTHO05D007972 5.3e-23 110.2 55 89.1
BraSC48t46333Z Brassica rapa HOM05D002864 ORTHO05D007972 5.3e-23 110.2 55 89.1
CAN.G1321.7 Capsicum annuum HOM05D002864 ORTHO05D007972 5.3e-23 110.2 55 90.9
CAN.G539.2 Capsicum annuum HOM05D002864 ORTHO05D007972 5.3e-23 110.2 55 90.9
Thhalv10001270m.g Eutrema salsugineum HOM05D002864 ORTHO05D007972 5.3e-23 110.2 55 89.1
SabraMtG0009000 Salix brachista HOM05D002864 ORTHO05D007972 5.3e-23 110.2 55 90.9
Zm00001eb126090 Zea mays HOM05D002864 ORTHO05D007972 5.3e-23 110.2 55 90.9
Zm00001eb187520 Zea mays HOM05D002864 ORTHO05D007972 5.3e-23 110.2 55 90.9
Zm00001eb436400 Zea mays HOM05D002864 ORTHO05D007972 5.3e-23 110.2 55 90.9
Zm00001eb438850 Zea mays HOM05D002864 ORTHO05D007972 5.3e-23 110.2 55 90.9
Zm00001eb440640 Zea mays HOM05D002864 ORTHO05D007972 5.3e-23 110.2 55 90.9
CANSAT16G0027 Cannabis sativa HOM05D002864 ORTHO05D007972 6.9e-23 109.8 55 89.1
Aa31csc705G10 Aethionema arabicum HOM05D002864 ORTHO05D007972 1.5e-22 108.6 55 87.3
Solyc09g050020.3 Solanum lycopersicum HOM05D002864 ORTHO05D007972 1.5e-22 108.6 55 89.1
Peaxi162Scf00296g00719 Petunia axillaris HOM05D002864 ORTHO05D007972 2.0e-22 108.2 55 90.9
RcHm_v2.0_MTg0499071 Rosa chinensis HOM05D002864 ORTHO05D007972 2.6e-22 107.8 55 89.1
Psat6g041400 Pisum sativum HOM05D002864 ORTHO05D007972 3.4e-22 107.5 55 89.1
Sed0001516 Sechium edule HOM05D002864 ORTHO05D007972 4.5e-22 107.1 55 89.1
CsaV3_UNG209910 Cucumis sativus L. HOM05D002864 ORTHO05D007972 1.0e-21 105.9 55 89.1
HanXRQMTg0579511 Helianthus annuus HOM05D002864 ORTHO05D007972 1.0e-21 105.9 55 85.5
LjContig00315g0014259 Lotus japonicus HOM05D002864 ORTHO05D007972 1.0e-21 105.9 53 88.7
LjContig00439g0009771 Lotus japonicus HOM05D002864 ORTHO05D007972 1.0e-21 105.9 53 88.7
LjContig00446g0017432 Lotus japonicus HOM05D002864 ORTHO05D007972 1.0e-21 105.9 53 88.7
DCAR_032458 Daucus carota HOM05D002864 ORTHO05D007972 3.5e-19 97.4 55 81.8
Nitab4.5_0029129g0010 Nicotiana tabacum HOM05D002864 ORTHO05D007972 4.6e-19 97.1 55 83.6
Nitab4.5_0004300g0130 Nicotiana tabacum HOM05D002864 ORTHO05D007972 1.1e-17 92.4 52 82.7
AT2G07718 Arabidopsis thaliana HOM05D014754 ORTHO05D017434 9.6e-17 89.4 47 83.0
ATMG00590 Arabidopsis thaliana HOM05D014754 ORTHO05D017434 9.6e-17 89.4 47 83.0
Solyc00g500240.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 3.7e-16 87.4 44 88.6
Solyc00g500364.1 Solanum lycopersicum HOM05D002864 ORTHO05D007972 3.7e-16 87.4 44 88.6
CARHR282960 Cardamine hirsuta HOM05D014754 ORTHO05D017434 6.2e-16 86.7 42 90.5
TPR.G36555 Trifolium pratense HOM05D002864 ORTHO05D007972 1.4e-12 75.5 35 88.6
SHI26646 Sapria himalayana HOM05D002864 ORTHO05D007972 3.2e-12 74.3 34 91.2
Oeu043609.1 Olea europaea HOM05D002864 ORTHO05D007972 1.6e-11 72.0 54 63.0
SMO053G0012 Selaginella moellendorffii HOM05D002864 ORTHO05D007972 6.1e-11 70.1 50 64.0
EL10Ac5g12272 Beta vulgaris HOM05D002864 ORTHO05D007972 5.3e-07 57.0 33 63.6


User provided reference genes

Program Settings