Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI54103 Sapria himalayana HOM05D000043 ORTHO05D002577 3.9e-27 124.0 61 100.0
SHI48528 Sapria himalayana HOM05D000043 ORTHO05D002577 1.3e-14 82.4 82 58.5
SHI53113 Sapria himalayana HOM05D000043 ORTHO05D002577 3.8e-14 80.9 39 100.0
SHI54814 Sapria himalayana HOM05D000043 ORTHO05D002577 1.2e-12 75.9 39 92.3
SHI36790 Sapria himalayana HOM05D000043 ORTHO05D002577 4.6e-12 73.9 39 89.7
SHI36849 Sapria himalayana HOM05D000043 ORTHO05D002577 4.6e-12 73.9 39 92.3
SHI39145 Sapria himalayana HOM05D000043 ORTHO05D002577 4.6e-12 73.9 39 92.3
SHI55172 Sapria himalayana HOM05D000043 ORTHO05D002577 4.6e-12 73.9 39 92.3
SHI35770 Sapria himalayana HOM05D000043 ORTHO05D002577 1.0e-11 72.8 39 89.7
SHI11479 Sapria himalayana HOM05D000043 ORTHO05D002577 8.8e-11 69.7 39 84.6
SHI49879 Sapria himalayana HOM05D000043 ORTHO05D002577 1.5e-10 68.9 36 91.7
SHI50498 Sapria himalayana HOM05D000043 ORTHO05D002577 5.7e-10 67.0 43 81.4
Actinidia06641 Actinidia chinensis HOM05D000043 ORTHO05D002577 1.3e-09 65.9 39 79.5
Manes.13G082500 Manihot esculenta HOM05D000043 ORTHO05D002577 1.7e-09 65.5 39 74.4
SHI47917 Sapria himalayana HOM05D000043 ORTHO05D002577 1.7e-09 65.5 39 74.4
TPR.G37361 Trifolium pratense HOM05D000043 ORTHO05D002577 2.2e-09 65.1 39 76.9
vmacro12863 Vaccinium macrocarpon HOM05D000043 ORTHO05D002577 2.8e-09 64.7 39 79.5
Hma1.2p1_0528F.1_g173000 Hydrangea macrophylla HOM05D000043 ORTHO05D002577 3.7e-09 64.3 39 76.9
SHI46217 Sapria himalayana HOM05D000043 ORTHO05D002577 3.7e-09 64.3 39 79.5
Cfa002821 Carpinus fangiana HOM05D000043 ORTHO05D002577 4.8e-09 63.9 39 74.4
Ciclev10001173m.g Citrus clementina HOM05D000043 ORTHO05D002577 4.8e-09 63.9 39 74.4
arahy.Tifrunner.gnm1.ann1.N953SJ Arachis hypogaea HOM05D000043 ORTHO05D002577 6.3e-09 63.5 39 74.4
arahy.Tifrunner.gnm1.ann1.RE10SM Arachis hypogaea HOM05D000043 ORTHO05D002577 6.3e-09 63.5 39 74.4
Ca_17645_v3 Cicer arietinum L. HOM05D000043 ORTHO05D002577 6.3e-09 63.5 39 76.9
DCAR_011432 Daucus carota HOM05D000043 ORTHO05D002577 6.3e-09 63.5 39 74.4
SHI44790 Sapria himalayana HOM05D000043 ORTHO05D002577 6.3e-09 63.5 39 79.5
SHI51890 Sapria himalayana HOM05D000043 ORTHO05D002577 6.3e-09 63.5 80 48.8
Dinv03732 Davidia involucrata HOM05D000043 ORTHO05D002577 8.2e-09 63.2 39 74.4
SHI36547 Sapria himalayana HOM05D000043 ORTHO05D002577 8.2e-09 63.2 39 76.9
PSO675G0072 Papaver somniferum HOM05D000043 ORTHO05D002577 1.1e-08 62.8 39 71.8
Potri.005G060800 Populus trichocarpa HOM05D000043 ORTHO05D002577 1.1e-08 62.8 39 74.4
Sabra05G0051200 Salix brachista HOM05D000043 ORTHO05D002577 1.1e-08 62.8 39 74.4
THA.LOC104821854 Tarenaya hassleriana HOM05D000043 ORTHO05D002577 1.1e-08 62.8 39 71.8
VMungo0251G3453 Vigna mungo HOM05D000043 ORTHO05D002577 1.1e-08 62.8 39 74.4
GSVIVG01026515001 Vitis vinifera HOM05D000043 ORTHO05D002577 1.1e-08 62.8 39 74.4
Lj4C848G12 Lonicera japonica HOM05D000043 ORTHO05D002577 1.4e-08 62.4 39 74.4
Lj4g0001619 Lotus japonicus HOM05D000043 ORTHO05D002577 1.4e-08 62.4 39 74.4
PSO541G5060 Papaver somniferum HOM05D000043 ORTHO05D002577 1.4e-08 62.4 39 69.2
Aqoxy6G00269 Aquilegia oxysepala HOM05D000043 ORTHO05D002577 1.8e-08 62.0 39 74.4
AL1G55680 Arabidopsis lyrata HOM05D000043 ORTHO05D002577 1.8e-08 62.0 39 71.8
Duzib147G0560 Durio zibethinus HOM05D000043 ORTHO05D002577 1.8e-08 62.0 39 74.4
Thhalv10011477m.g Eutrema salsugineum HOM05D000043 ORTHO05D002577 1.8e-08 62.0 39 71.8
Nn1g06202 Nelumbo nucifera HOM05D000043 ORTHO05D002577 1.8e-08 62.0 39 71.8
QL06p029233 Quercus lobata HOM05D000043 ORTHO05D002577 1.8e-08 62.0 39 74.4
SHI35319 Sapria himalayana HOM05D000043 ORTHO05D368069 1.8e-08 62.0 36 83.3
SHI44615 Sapria himalayana HOM05D000043 ORTHO05D002577 1.8e-08 62.0 39 71.8
Psat7g046600 Pisum sativum HOM05D000043 ORTHO05D002577 2.4e-08 61.6 39 71.8
Sp1g35800 Schrenkiella parvula HOM05D000043 ORTHO05D002577 2.4e-08 61.6 39 69.2
TAR381G0494 Trochodendron aralioides HOM05D000043 ORTHO05D002577 2.4e-08 61.6 39 71.8
TAR381G0782 Trochodendron aralioides HOM05D000043 ORTHO05D002577 2.4e-08 61.6 39 71.8
Atru.chr4.838 Acer truncatum HOM05D000043 ORTHO05D002577 3.1e-08 61.2 39 69.2
Glyma.05G190700 Glycine max HOM05D000043 ORTHO05D002577 3.1e-08 61.2 39 71.8
Glyma.08G156100 Glycine max HOM05D000043 ORTHO05D002577 3.1e-08 61.2 39 71.8
Gohir.A02G094100 Gossypium hirsutum HOM05D000043 ORTHO05D002577 3.1e-08 61.2 39 71.8
Gohir.D02G104100 Gossypium hirsutum HOM05D000043 ORTHO05D002577 3.1e-08 61.2 39 71.8
Gorai.005G118200 Gossypium raimondii HOM05D000043 ORTHO05D002577 3.1e-08 61.2 39 71.8
MBI03_g11310_MAGBIO Magnolia biondii HOM05D000043 ORTHO05D002577 3.1e-08 61.2 39 69.2
Phvul.002G271100 Phaseolus vulgaris HOM05D000043 ORTHO05D002577 3.1e-08 61.2 39 71.8
Rhsim10G0136300 Rhododendron simsii HOM05D000043 ORTHO05D002577 3.1e-08 61.2 39 71.8
RhsimUnG0132600 Rhododendron simsii HOM05D000043 ORTHO05D002577 3.1e-08 61.2 39 71.8
SHI43782 Sapria himalayana HOM05D000043 ORTHO05D002577 3.1e-08 61.2 35 80.0
SHI46089 Sapria himalayana HOM05D000043 ORTHO05D002577 3.1e-08 61.2 35 80.0
SHI48501 Sapria himalayana HOM05D000043 ORTHO05D002577 3.1e-08 61.2 35 80.0
AT1G48880 Arabidopsis thaliana HOM05D000043 ORTHO05D002577 4.1e-08 60.8 39 69.2
BcaC07g37097 Brassica carinata HOM05D000043 ORTHO05D002577 4.1e-08 60.8 39 69.2
A08p04350 Brassica napus HOM05D000043 ORTHO05D002577 4.1e-08 60.8 39 69.2
C08p04630 Brassica napus HOM05D000043 ORTHO05D002577 4.1e-08 60.8 39 69.2
BolC8t47266H Brassica oleracea HOM05D000043 ORTHO05D002577 4.1e-08 60.8 39 69.2
BraA08t32462Z Brassica rapa HOM05D000043 ORTHO05D002577 4.1e-08 60.8 39 69.2
Cpa.g.sc42.126 Carica papaya HOM05D000043 ORTHO05D002577 4.1e-08 60.8 39 69.2
RcHm_v2.0_Chr2g0120351 Rosa chinensis HOM05D000043 ORTHO05D002577 4.1e-08 60.8 39 71.8
SHI49492 Sapria himalayana HOM05D000043 ORTHO05D002577 4.1e-08 60.8 35 77.1
BcaB04g17380 Brassica carinata HOM05D000043 ORTHO05D002577 5.3e-08 60.5 39 69.2
Haze_25117 Corylus avellana HOM05D000043 ORTHO05D002577 5.3e-08 60.5 39 69.2
MELO3C023252.2 Cucumis melo HOM05D000043 ORTHO05D002577 5.3e-08 60.5 39 69.2
MBI06_g43011_MAGBIO Magnolia biondii HOM05D000043 ORTHO05D002577 5.3e-08 60.5 39 66.7
Medtr8g093530 Medicago truncatula HOM05D000043 ORTHO05D002577 5.3e-08 60.5 39 71.8
Oeu047688.1 Olea europaea HOM05D000043 ORTHO05D002577 5.3e-08 60.5 39 69.2
PGR102G0504 Punica granatum HOM05D000043 ORTHO05D002577 5.3e-08 60.5 39 69.2
SHI50899 Sapria himalayana HOM05D000043 ORTHO05D002577 5.3e-08 60.5 31 87.1
CiPaw.03G129000 Carya illinoinensis HOM05D000043 ORTHO05D002577 6.9e-08 60.1 39 69.2
Lalb_Chr13g0296561 Lupinus albus HOM05D000043 ORTHO05D002577 6.9e-08 60.1 39 69.2
SHI47842 Sapria himalayana HOM05D000043 ORTHO05D002577 6.9e-08 60.1 40 65.0
SHI48951 Sapria himalayana HOM05D000043 ORTHO05D002577 6.9e-08 60.1 39 66.7
SHI53364 Sapria himalayana HOM05D000043 ORTHO05D002577 6.9e-08 60.1 35 77.1
Thecc.01G127900 Theobroma cacao HOM05D000043 ORTHO05D002577 6.9e-08 60.1 39 69.2
Migut.H00737 Erythranthe guttata HOM05D000043 ORTHO05D002577 9.1e-08 59.7 39 71.8
Nn5g28624 Nelumbo nucifera HOM05D000043 ORTHO05D002577 9.1e-08 59.7 39 69.2
Oeu037807.1 Olea europaea HOM05D000043 ORTHO05D002577 9.1e-08 59.7 39 66.7
CANSAT11G2320 Cannabis sativa HOM05D000043 ORTHO05D002577 1.2e-07 59.3 39 66.7
Eucgr.H04947 Eucalyptus grandis HOM05D000043 ORTHO05D002577 1.2e-07 59.3 39 69.2
FAN26G3172 Fragaria x ananassa HOM05D000043 ORTHO05D002577 1.5e-07 58.9 39 69.2
Lsat_1_v5_gn_6_96640 Lactuca sativa HOM05D000043 ORTHO05D002577 1.5e-07 58.9 39 64.1
SHI52840 Sapria himalayana HOM05D000043 ORTHO05D002577 1.5e-07 58.9 42 61.9
TWI31G1156 Tripterygium wilfordii HOM05D000043 ORTHO05D002577 1.5e-07 58.9 39 64.1
CAN.G267.1 Capsicum annuum HOM05D000043 ORTHO05D002577 2.0e-07 58.5 39 69.2
CDE08G0649 Ceratophyllum demersum HOM05D000043 ORTHO05D002577 2.0e-07 58.5 39 66.7
ClCG02G000580 Citrullus lanatus HOM05D000043 ORTHO05D002577 2.0e-07 58.5 39 66.7
SHI24992 Sapria himalayana HOM05D000043 ORTHO05D002577 2.0e-07 58.5 39 66.7
Sed0002238 Sechium edule HOM05D000043 ORTHO05D002577 2.0e-07 58.5 39 66.7
Solyc11g005790.3 Solanum lycopersicum HOM05D000043 ORTHO05D002577 2.0e-07 58.5 39 69.2
TWI79G0280 Tripterygium wilfordii HOM05D000043 ORTHO05D002577 2.0e-07 58.5 39 66.7
Aa31LG10G5020 Aethionema arabicum HOM05D000043 ORTHO05D002577 2.6e-07 58.2 39 64.1
Cc07_g18110 Coffea canephora HOM05D000043 ORTHO05D002577 2.6e-07 58.2 39 66.7
CsaV3_2G018200 Cucumis sativus L. HOM05D000043 ORTHO05D002577 2.6e-07 58.2 39 66.7
Nitab4.5_0000805g0030 Nicotiana tabacum HOM05D000043 ORTHO05D002577 2.6e-07 58.2 39 69.2
SHI51749 Sapria himalayana HOM05D000043 ORTHO05D002577 2.6e-07 58.2 40 62.5
GSVIVG01010030001 Vitis vinifera HOM05D000043 ORTHO05D002577 2.6e-07 58.2 39 64.1
Carub.0001s3803 Capsella rubella HOM05D000043 ORTHO05D002577 3.4e-07 57.8 39 66.7
FvH4_1g24130 Fragaria vesca HOM05D000043 ORTHO05D002577 3.4e-07 57.8 39 66.7
FAN19G2124 Fragaria x ananassa HOM05D000043 ORTHO05D002577 3.4e-07 57.8 39 66.7
Nitab4.5_0000877g0050 Nicotiana tabacum HOM05D000043 ORTHO05D002577 3.4e-07 57.8 39 69.2
Peaxi162Scf00012g00153 Petunia axillaris HOM05D000043 ORTHO05D002577 3.4e-07 57.8 39 69.2
SHI43342 Sapria himalayana HOM05D000043 ORTHO05D002577 3.4e-07 57.8 38 68.4
Hund26730 Selenicereus undatus HOM05D000043 ORTHO05D002577 3.4e-07 57.8 39 69.2
Sopen11g001750 Solanum pennellii HOM05D000043 ORTHO05D002577 3.4e-07 57.8 39 69.2
PGSC0003DMG400028658 Solanum tuberosum HOM05D000043 ORTHO05D002577 3.4e-07 57.8 39 69.2
Actinidia10674 Actinidia chinensis HOM05D000043 ORTHO05D003706 5.9e-07 57.0 39 66.7
HanXRQChr08g0232551 Helianthus annuus HOM05D000043 ORTHO05D002577 5.9e-07 57.0 39 64.1
TAR628G1241 Trochodendron aralioides HOM05D000043 ORTHO05D002577 5.9e-07 57.0 39 66.7
ATR1136G013 Amborella trichopoda HOM05D000043 ORTHO05D002577 7.7e-07 56.6 39 66.7
Hma1.2p1_2059F.1_g312880 Hydrangea macrophylla HOM05D000043 ORTHO05D002577 7.7e-07 56.6 39 64.1
Hund17397 Selenicereus undatus HOM05D000043 ORTHO05D002577 7.7e-07 56.6 39 66.7
CARHR038880 Cardamine hirsuta HOM05D000043 ORTHO05D002577 1.0e-06 56.2 39 64.1
PGR042G0882 Punica granatum HOM05D000043 ORTHO05D002577 1.0e-06 56.2 39 66.7
ECA246G0278 Erigeron canadensis HOM05D000043 ORTHO05D002577 1.3e-06 55.8 39 61.5
Actinidia15159 Actinidia chinensis HOM05D000043 ORTHO05D002577 1.7e-06 55.5 39 64.1
Cfa018364 Carpinus fangiana HOM05D000043 ORTHO05D002577 2.2e-06 55.1 39 64.1
Haze_17710 Corylus avellana HOM05D000043 ORTHO05D002577 2.2e-06 55.1 39 64.1
HanXRQChr05g0161091 Helianthus annuus HOM05D000043 ORTHO05D002577 2.2e-06 55.1 39 61.5
Manes.02G175100 Manihot esculenta HOM05D000043 ORTHO05D002577 2.2e-06 55.1 39 61.5
SEGI_34097 Sequoiadendron giganteum HOM05D000043 ORTHO05D002577 2.9e-06 54.7 39 56.4
Cpa.g.sc49.65 Carica papaya HOM05D000043 ORTHO05D002577 3.8e-06 54.3 39 59.0
Ciclev10001283m.g Citrus clementina HOM05D000043 ORTHO05D002577 3.8e-06 54.3 39 59.0
SGA_v2.0_scaffold250G44983 Striga asiatica HOM05D000043 ORTHO05D002577 3.8e-06 54.3 39 64.1
Haze_17709 Corylus avellana HOM05D000043 ORTHO05D002577 5.0e-06 53.9 39 61.5
Migut.C01040 Erythranthe guttata HOM05D000043 ORTHO05D002577 5.0e-06 53.9 39 64.1
Potri.002G071900 Populus trichocarpa HOM05D000043 ORTHO05D002577 5.0e-06 53.9 39 59.0
Oeu046006.4 Olea europaea HOM05D000043 ORTHO05D002577 6.5e-06 53.5 34 67.6
Sabra05G0143300 Salix brachista HOM05D000043 ORTHO05D002577 6.5e-06 53.5 39 61.5
AUR62013491 Chenopodium quinoa HOM05D000043 ORTHO05D002577 8.5e-06 53.1 39 61.5
SHI23779 Sapria himalayana HOM05D000043 ORTHO05D002577 8.5e-06 53.1 56 53.6


User provided reference genes

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