Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI54049 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-117 426.4 209 100.0
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 3.6e-88 328.6 199 85.9
SHI36270 Sapria himalayana HOM05D001560 ORTHO05D003613 2.7e-83 312.4 199 81.9
SHI36584 Sapria himalayana HOM05D001560 ORTHO05D003613 2.3e-82 309.3 199 81.4
SHI27345 Sapria himalayana HOM05D001560 ORTHO05D003613 2.1e-80 302.8 182 85.2
Cpa.g.sc89.22 Carica papaya HOM05D001560 ORTHO05D003613 6.8e-79 297.7 206 77.2
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 4.4e-78 295.0 204 77.5
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 1.7e-77 293.1 202 78.2
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 2.2e-77 292.7 204 77.9
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-77 292.7 199 77.9
LjContig00315g0001212 Lotus japonicus HOM05D001560 ORTHO05D003613 2.8e-77 292.4 204 77.0
Hma1.2p1_0261F.1_g105120 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 4.9e-77 291.6 204 77.0
Lj2C1229T3 Lonicera japonica HOM05D001560 ORTHO05D003613 4.9e-77 291.6 204 77.5
Ca_14833_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 8.3e-77 290.8 204 77.0
Ca_22165_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 8.3e-77 290.8 204 77.0
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 8.3e-77 290.8 205 75.6
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 8.3e-77 290.8 205 75.6
Sed0013276 Sechium edule HOM05D001560 ORTHO05D003613 8.3e-77 290.8 199 77.9
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 2.4e-76 289.3 199 77.4
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 3.1e-76 288.9 204 77.0
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 5.4e-76 288.1 204 77.0
TPR.G162 Trifolium pratense HOM05D001560 ORTHO05D003613 9.2e-76 287.3 204 76.5
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 5.9e-75 284.6 206 74.3
SHI37382 Sapria himalayana HOM05D001560 ORTHO05D003613 5.9e-75 284.6 178 82.6
Nn1g09975 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.0e-74 283.9 204 76.0
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.0e-74 283.9 204 76.0
Nn4g26006 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.0e-74 283.9 204 76.0
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 1.3e-74 283.5 205 75.6
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 1.3e-74 283.5 205 75.6
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 1.3e-74 283.5 205 75.6
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 1.3e-74 283.5 205 75.6
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 2.3e-74 282.7 179 81.6
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 3.9e-74 282.0 185 78.4
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-73 280.4 166 83.7
Sp3g25920 Schrenkiella parvula HOM05D001560 ORTHO05D003613 2.5e-73 279.3 206 73.3
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 4.3e-73 278.5 201 75.1
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 7.3e-73 277.7 207 72.9
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 7.3e-73 277.7 207 72.9
BraSC48t46281Z Brassica rapa HOM05D001560 ORTHO05D003613 2.1e-72 276.2 207 72.5
Sc04g0005570 Simmondsia chinensis HOM05D001560 ORTHO05D003613 2.1e-72 276.2 206 73.8
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 2.8e-72 275.8 199 73.9
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 2.8e-72 275.8 204 74.0
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 2.8e-72 275.8 199 74.4
SHI46061 Sapria himalayana HOM05D001560 ORTHO05D003613 2.8e-72 275.8 201 73.6
Hund12886 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.6e-72 275.4 203 73.9
Hund27586 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.6e-72 275.4 203 73.9
Hund27816 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.6e-72 275.4 203 73.9
Hund27900 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.6e-72 275.4 203 73.9
Hund28069 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.6e-72 275.4 203 73.9
Hund28082 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.6e-72 275.4 203 73.9
Hund28866 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.6e-72 275.4 203 73.9
Hund28883 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.6e-72 275.4 203 73.9
Hund29084 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.6e-72 275.4 203 73.9
Hund29205 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.6e-72 275.4 203 73.9
SHI43894 Sapria himalayana HOM05D001560 ORTHO05D003613 1.8e-71 273.1 169 82.2
Sopen11g018210 Solanum pennellii HOM05D001560 ORTHO05D003613 2.3e-71 272.7 204 73.0
CsaV3_UNG210420 Cucumis sativus L. HOM05D001560 ORTHO05D003613 4.0e-71 271.9 197 74.1
Potri.007G062302 Populus trichocarpa HOM05D001560 ORTHO05D003613 1.5e-70 270.0 195 74.9
SabraMtG0009600 Salix brachista HOM05D001560 ORTHO05D003613 1.5e-70 270.0 195 74.9
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 2.0e-70 269.6 199 74.9
AUR62038665 Chenopodium quinoa HOM05D001560 ORTHO05D003613 3.4e-70 268.9 196 74.0
unitig_87.g27957 Utricularia gibba HOM05D001560 ORTHO05D003613 5.8e-70 268.1 201 74.1
Nn4g26010 Nelumbo nucifera HOM05D001560 ORTHO05D003613 7.5e-70 267.7 200 73.5
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-69 266.2 150 89.3
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-69 266.2 201 71.6
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-69 266.2 201 71.6
SHI38532 Sapria himalayana HOM05D001560 ORTHO05D003613 7.0e-68 261.2 199 72.4
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-66 256.9 183 73.2
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 1.5e-65 253.4 154 84.4
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 3.3e-65 252.3 178 75.8
SHI51797 Sapria himalayana HOM05D001560 ORTHO05D003613 1.6e-64 250.0 148 84.5
PSO675G8388 Papaver somniferum HOM05D001560 ORTHO05D003613 3.4e-62 242.3 202 68.8
arahy.Tifrunner.gnm1.ann1.7G246T Arachis hypogaea HOM05D001560 ORTHO05D003613 4.4e-62 241.9 168 76.8
arahy.Tifrunner.gnm1.ann1.JTWL6Q Arachis hypogaea HOM05D001560 ORTHO05D003613 4.9e-61 238.4 160 79.4
SHI49510 Sapria himalayana HOM05D001560 ORTHO05D003613 2.1e-59 233.0 172 72.1
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 7.8e-59 231.1 201 65.2
HanXRQChr09g0251121 Helianthus annuus HOM05D001560 ORTHO05D003613 2.5e-57 226.1 161 73.9
SHI36374 Sapria himalayana HOM05D001560 ORTHO05D003613 3.6e-56 222.2 138 81.2
SHI37134 Sapria himalayana HOM05D001560 ORTHO05D003613 8.1e-56 221.1 117 89.7
Nitab4.5_0000886g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 3.1e-55 219.2 175 66.9
CAN.G745.35 Capsicum annuum HOM05D001560 ORTHO05D003613 6.8e-55 218.0 152 76.3
CDE02G0303 Ceratophyllum demersum HOM05D001560 ORTHO05D003613 2.0e-54 216.5 159 73.6
Nitab4.5_0000307g0350 Nicotiana tabacum HOM05D001560 ORTHO05D003613 4.9e-53 211.8 179 64.2
Peaxi162Scf00622g00016 Petunia axillaris HOM05D001560 ORTHO05D003613 2.4e-52 209.5 171 68.4
Solyc09g056070.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 5.4e-52 208.4 201 60.2
SHI37855 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-51 207.2 196 63.3
ClCG10G004710 Citrullus lanatus HOM05D001560 ORTHO05D003613 2.3e-50 203.0 196 62.8
HanXRQChr01g0012841 Helianthus annuus HOM05D001560 ORTHO05D003613 9.5e-49 197.6 197 60.9
Lsat_1_v5_gn_6_108960 Lactuca sativa HOM05D001560 ORTHO05D003613 1.1e-47 194.1 133 73.7
CARHR287190 Cardamine hirsuta HOM05D001560 ORTHO05D003613 3.1e-47 192.6 203 57.6
Peaxi162Scf00348g00514 Petunia axillaris HOM05D001560 ORTHO05D003613 4.4e-46 188.7 193 59.1
Lsat_1_v5_gn_5_16600 Lactuca sativa HOM05D001560 ORTHO05D003613 9.9e-46 187.6 143 72.7
Sed0003843 Sechium edule HOM05D001560 ORTHO05D003613 1.3e-42 177.2 199 56.8
SHI34998 Sapria himalayana HOM05D001560 ORTHO05D003613 5.1e-42 175.3 106 81.1
TWI75G1342 Tripterygium wilfordii HOM05D001560 ORTHO05D003613 8.7e-42 174.5 123 77.2
SHI34996 Sapria himalayana HOM05D001560 ORTHO05D003613 1.9e-41 173.3 110 80.0
SHI36625 Sapria himalayana HOM05D001560 ORTHO05D003613 2.5e-41 172.9 106 82.1
SHI53219 Sapria himalayana HOM05D001560 ORTHO05D003613 3.6e-40 169.1 103 79.6
SHI38214 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-39 167.5 108 79.6
SHI35000 Sapria himalayana HOM05D001560 ORTHO05D003613 5.3e-39 165.2 105 82.9
CSS0014898 Camellia sinensis var. sinensis HOM05D001560 ORTHO05D003613 1.5e-38 163.7 114 72.8
HanXRQChr10g0297191 Helianthus annuus HOM05D001560 ORTHO05D003613 1.5e-38 163.7 139 66.2
Hund12883 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.4e-38 162.2 203 51.7
GSVIVG01006203001 Vitis vinifera HOM05D001560 ORTHO05D003613 2.2e-37 159.8 108 74.1
arahy.Tifrunner.gnm1.ann1.K9CWE8 Arachis hypogaea HOM05D001560 ORTHO05D003613 6.4e-37 158.3 203 53.2
RhsimMtG0005500 Rhododendron simsii HOM05D001560 ORTHO05D003613 2.8e-32 142.9 113 72.6
COL.COLO4_04089 Corchorus olitorius HOM05D001560 ORTHO05D003613 4.8e-32 142.1 116 69.0
Nitab4.5_0001152g0950 Nicotiana tabacum HOM05D001560 ORTHO05D003613 6.2e-32 141.7 117 68.4
SEGI_26668 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 3.1e-31 139.4 86 74.4
SEGI_16710 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 4.0e-31 139.0 86 74.4
CSS0047048 Camellia sinensis var. sinensis HOM05D001560 ORTHO05D003613 1.1e-28 131.0 102 65.7
Lsat_1_v5_gn_3_89520 Lactuca sativa HOM05D001560 ORTHO05D003613 1.1e-28 131.0 112 67.9
HanXRQChr13g0415511 Helianthus annuus HOM05D001560 ORTHO05D003613 7.1e-28 128.3 107 69.2
SHI45394 Sapria himalayana HOM05D001560 ORTHO05D003613 9.3e-28 127.9 70 88.6
C01p34990 Brassica napus HOM05D001560 ORTHO05D003613 1.5e-25 120.6 108 65.7
Gorai.005G104100 Gossypium raimondii HOM05D001560 ORTHO05D003613 1.5e-25 120.6 103 66.0
Solyc09g057820.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.9e-25 120.2 85 67.1
SHI54824 Sapria himalayana HOM05D001560 ORTHO05D003613 7.4e-25 118.2 58 94.8
CAN.G623.2 Capsicum annuum HOM05D001560 ORTHO05D003613 1.6e-24 117.1 80 76.2
CAN.G1321.15 Capsicum annuum HOM05D001560 ORTHO05D003613 1.1e-23 114.4 200 44.0
SHI34636 Sapria himalayana HOM05D001560 ORTHO05D003613 5.3e-23 112.1 89 73.0
ClCG06G008570 Citrullus lanatus HOM05D001560 ORTHO05D003613 9.0e-23 111.3 89 70.8
Solyc11g030890.3 Solanum lycopersicum HOM05D001560 ORTHO05D003613 2.6e-22 109.8 106 60.4
ATR0693G347 Amborella trichopoda HOM05D001560 ORTHO05D003613 8.7e-18 94.7 83 68.7
AL3G44410 Arabidopsis lyrata HOM05D001560 ORTHO05D003613 5.8e-14 82.0 70 65.7
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-13 80.1 45 91.1
AagrBONN_evm.TU.Sc2ySwM_344.1486 Anthoceros agrestis HOM05D001560 ORTHO05D003613 2.9e-13 79.7 88 42.0
SHI38843 Sapria himalayana HOM05D001560 ORTHO05D003613 2.9e-13 79.7 45 88.9
Nitab4.5_0001152g1090 Nicotiana tabacum HOM05D001560 ORTHO05D003613 3.8e-13 79.3 79 58.2
HanXRQChr08g0236181 Helianthus annuus HOM05D001560 ORTHO05D003613 2.5e-12 76.6 59 71.2
Pp3c23_18180 Physcomitrium patens HOM05D001560 ORTHO05D003613 4.2e-12 75.9 94 39.4
Pp3c13_4900 Physcomitrium patens HOM05D001560 ORTHO05D003613 9.3e-12 74.7 112 40.2
SHI44217 Sapria himalayana HOM05D001560 ORTHO05D003613 6.7e-10 68.6 56 66.1
Pp3c2_31660 Physcomitrium patens HOM05D001560 ORTHO05D003613 2.5e-09 66.6 90 35.6
SHI39096 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-08 64.3 41 73.2
BcaC01g01473 Brassica carinata HOM05D001560 ORTHO05D003613 2.2e-08 63.5 41 70.7
C03p92380 Brassica napus HOM05D001560 ORTHO05D003613 2.2e-08 63.5 41 70.7
Potri.006G043650 Populus trichocarpa HOM05D003614 ORTHO05D004156 1.4e-07 60.8 88 34.1
Sabra06G0029800 Salix brachista HOM05D003614 ORTHO05D004156 1.4e-07 60.8 88 34.1
ATR0580G046 Amborella trichopoda HOM05D003614 ORTHO05D004156 2.4e-07 60.1 91 37.4
PGR142G0250 Punica granatum HOM05D003614 ORTHO05D004156 2.4e-07 60.1 104 33.7
RcHm_v2.0_Chr2g0124831 Rosa chinensis HOM05D003614 ORTHO05D004156 3.1e-07 59.7 93 35.5
Duzib128G0580 Durio zibethinus HOM05D003614 ORTHO05D004156 4.1e-07 59.3 88 34.1
SHI03570 Sapria himalayana HOM05D003614 ORTHO05D004156 4.1e-07 59.3 186 27.4
TWI74G0330 Tripterygium wilfordii HOM05D003614 ORTHO05D004156 4.1e-07 59.3 106 31.1
FAN02G3060 Fragaria x ananassa HOM05D003614 ORTHO05D004156 5.3e-07 58.9 102 35.3
Lsat_1_v5_gn_5_158800 Lactuca sativa HOM05D003614 ORTHO05D004156 5.3e-07 58.9 88 38.6
CANSAT54G1064 Cannabis sativa HOM05D003614 ORTHO05D004156 6.9e-07 58.5 88 36.4
MD12G1089700 Malus domestica HOM05D003614 ORTHO05D004156 6.9e-07 58.5 93 35.5
SGA_v2.0_scaffold94G28503 Striga asiatica HOM05D003614 ORTHO05D004156 6.9e-07 58.5 106 32.1
FvH4_6g25070 Fragaria vesca HOM05D003614 ORTHO05D004156 9.0e-07 58.2 102 35.3
FAN14G1287 Fragaria x ananassa HOM05D003614 ORTHO05D004156 9.0e-07 58.2 102 35.3
Oeu008197.1 Olea europaea HOM05D003614 ORTHO05D004156 9.0e-07 58.2 88 36.4
AagrBONN_evm.TU.Sc2ySwM_117.1402 Anthoceros agrestis HOM05D001806 ORTHO05D002069 1.2e-06 57.8 81 32.1
COL.COLO4_33914 Corchorus olitorius HOM05D003614 ORTHO05D004156 1.2e-06 57.8 88 34.1
FAN09G2704 Fragaria x ananassa HOM05D003614 ORTHO05D004156 1.2e-06 57.8 102 34.3
Manes.08G056200 Manihot esculenta HOM05D003614 ORTHO05D004156 1.2e-06 57.8 93 33.3
MBI14_g19444_MAGBIO Magnolia biondii HOM05D003614 ORTHO05D004156 1.5e-06 57.4 88 35.2
Prupe.7G047200 Prunus persica HOM05D003614 ORTHO05D004156 1.5e-06 57.4 88 36.4
Lalb_Chr02g0142191 Lupinus albus HOM05D003614 ORTHO05D004156 2.0e-06 57.0 88 36.4
unitig_748.g7231 Utricularia gibba HOM05D003614 ORTHO05D004156 2.0e-06 57.0 88 36.4
arahy.Tifrunner.gnm1.ann1.MR16VB Arachis hypogaea HOM05D003614 ORTHO05D004156 4.5e-06 55.8 88 37.5
arahy.Tifrunner.gnm1.ann1.P66LNP Arachis hypogaea HOM05D003614 ORTHO05D004156 4.5e-06 55.8 88 37.5
Glyma.16G116350 Glycine max HOM05D003614 ORTHO05D004156 4.5e-06 55.8 88 37.5
Glyma.16G222000 Glycine max HOM05D003614 ORTHO05D004156 4.5e-06 55.8 88 37.5
Peaxi162Scf00130g01210 Petunia axillaris HOM05D003614 ORTHO05D004156 4.5e-06 55.8 88 36.4
CiPaw.09G043900 Carya illinoinensis HOM05D003614 ORTHO05D004156 5.9e-06 55.5 104 30.8
MELO3C025378.2 Cucumis melo HOM05D003614 ORTHO05D004156 5.9e-06 55.5 88 31.8
Sed0022963 Sechium edule HOM05D003614 ORTHO05D004156 5.9e-06 55.5 88 33.0
VMungo0331G0942 Vigna mungo HOM05D003614 ORTHO05D004156 5.9e-06 55.5 88 36.4
CSS0031196 Camellia sinensis var. sinensis HOM05D003614 ORTHO05D004156 7.7e-06 55.1 88 31.8
ClCG10G005410 Citrullus lanatus HOM05D003614 ORTHO05D004156 7.7e-06 55.1 88 31.8
Haze_19741 Corylus avellana HOM05D003614 ORTHO05D004156 7.7e-06 55.1 88 33.0
Psat6g087880 Pisum sativum HOM05D003614 ORTHO05D004156 7.7e-06 55.1 92 34.8
TPR.G13793 Trifolium pratense HOM05D003614 ORTHO05D004156 7.7e-06 55.1 92 34.8
Atru.chr1.1276 Acer truncatum HOM05D003614 ORTHO05D004156 1.0e-05 54.7 88 31.8
SHI44984 Sapria himalayana HOM05D001560 ORTHO05D003613 1.0e-05 54.7 32 84.4


User provided reference genes

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