Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI53927 Sapria himalayana HOM05D004598 ORTHO05D005550 2.3e-72 275.4 133 100.0
SHI53813 Sapria himalayana HOM05D004598 ORTHO05D005550 9.0e-69 263.5 133 95.5
SHI41529 Sapria himalayana HOM05D004598 ORTHO05D005550 5.3e-61 237.7 133 88.7
SHI43372 Sapria himalayana HOM05D004598 ORTHO05D005550 1.1e-50 203.4 103 95.1
SHI39037 Sapria himalayana HOM05D004598 ORTHO05D005550 1.0e-43 180.3 96 87.5
SHI34561 Sapria himalayana HOM05D004598 ORTHO05D005550 5.7e-39 164.5 151 62.9
Sabra01G0022600 Salix brachista HOM05D004598 ORTHO05D005550 8.6e-11 70.9 52 61.5
Cc07_g11450 Coffea canephora HOM05D004598 ORTHO05D005550 1.5e-10 70.1 52 63.5
Potri.001G031500 Populus trichocarpa HOM05D004598 ORTHO05D005550 1.9e-10 69.7 52 59.6
Duzib133G0026 Durio zibethinus HOM05D004598 ORTHO05D005550 2.5e-10 69.3 52 61.5
Sc16g0001780 Simmondsia chinensis HOM05D004598 ORTHO05D005550 3.3e-10 68.9 51 62.7
CiPaw.13G015900 Carya illinoinensis HOM05D004598 ORTHO05D005550 4.3e-10 68.6 52 59.6
CDE02G1977 Ceratophyllum demersum HOM05D004598 ORTHO05D005550 4.3e-10 68.6 62 50.0
Hund05921 Selenicereus undatus HOM05D004598 ORTHO05D005550 4.3e-10 68.6 54 59.3
MBI19_g29897_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 7.3e-10 67.8 52 57.7
Manes.14G169500 Manihot esculenta HOM05D004598 ORTHO05D005550 7.3e-10 67.8 47 63.8
ClCG02G003800 Citrullus lanatus HOM05D004598 ORTHO05D005550 9.5e-10 67.4 69 49.3
MELO3C013319.2 Cucumis melo HOM05D004598 ORTHO05D005550 9.5e-10 67.4 65 50.8
MBI02_g31690_MAGBIO Magnolia biondii HOM05D004598 ORTHO05D005550 9.5e-10 67.4 52 57.7
TAR624G0541 Trochodendron aralioides HOM05D004598 ORTHO05D005550 9.5e-10 67.4 54 57.4
VMungo1080G1126 Vigna mungo HOM05D004598 ORTHO05D005550 1.2e-09 67.0 52 57.7
Gohir.A07G077700 Gossypium hirsutum HOM05D004598 ORTHO05D005550 1.6e-09 66.6 52 57.7
Gohir.D07G082500 Gossypium hirsutum HOM05D004598 ORTHO05D005550 1.6e-09 66.6 52 57.7
Gorai.001G088100 Gossypium raimondii HOM05D004598 ORTHO05D005550 1.6e-09 66.6 52 57.7
Actinidia00342 Actinidia chinensis HOM05D004598 ORTHO05D005550 2.1e-09 66.2 54 57.4
Cpa.g.sc9.382 Carica papaya HOM05D004598 ORTHO05D005550 2.8e-09 65.9 65 50.8
CsaV3_7G001350 Cucumis sativus L. HOM05D004598 ORTHO05D005550 2.8e-09 65.9 65 50.8
Eucgr.H00040 Eucalyptus grandis HOM05D004598 ORTHO05D005550 2.8e-09 65.9 62 50.0
Phvul.005G043300 Phaseolus vulgaris HOM05D004598 ORTHO05D005550 2.8e-09 65.9 52 55.8
TWI18G0003 Tripterygium wilfordii HOM05D004598 ORTHO05D005550 2.8e-09 65.9 52 57.7
Actinidia02429 Actinidia chinensis HOM05D004598 ORTHO05D005550 3.6e-09 65.5 60 55.0
Ah.03g134220 Amaranthus hybridus HOM05D004598 ORTHO05D005550 6.1e-09 64.7 52 57.7
AUR62026210 Chenopodium quinoa HOM05D004598 ORTHO05D005550 6.1e-09 64.7 60 55.0
Ca_23979_v3 Cicer arietinum L. HOM05D004598 ORTHO05D005550 6.1e-09 64.7 52 57.7
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 6.1e-09 64.7 54 53.7
Medtr8g040610 Medicago truncatula HOM05D004598 ORTHO05D005550 6.1e-09 64.7 66 48.5
Haze_02994 Corylus avellana HOM05D006110 ORTHO05D007774 8.0e-09 64.3 58 51.7
Lj3g0020284 Lotus japonicus HOM05D004598 ORTHO05D005550 8.0e-09 64.3 66 45.5
PGR004G0790 Punica granatum HOM05D004598 ORTHO05D005550 8.0e-09 64.3 53 56.6
GSVIVG01017167001 Vitis vinifera HOM05D004598 ORTHO05D005550 8.0e-09 64.3 52 57.7
Lsat_1_v5_gn_9_118221 Lactuca sativa HOM05D004598 ORTHO05D005550 1.0e-08 63.9 53 52.8
Thecc.04G114500 Theobroma cacao HOM05D004598 ORTHO05D005550 1.0e-08 63.9 52 55.8
Atru.chr3.3248 Acer truncatum HOM05D004598 ORTHO05D005550 1.4e-08 63.5 79 38.0
BcaC07g41302 Brassica carinata HOM05D004598 ORTHO05D005550 1.4e-08 63.5 66 48.5
C08p43090 Brassica napus HOM05D004598 ORTHO05D005550 1.4e-08 63.5 66 48.5
BolC8t51865H Brassica oleracea HOM05D004598 ORTHO05D005550 1.4e-08 63.5 66 48.5
FvH4_2g15820 Fragaria vesca HOM05D004598 ORTHO05D005550 1.4e-08 63.5 59 47.5
Carub.0006s1977 Capsella rubella HOM05D004598 ORTHO05D005550 1.8e-08 63.2 60 53.3
HanXRQChr03g0066861 Helianthus annuus HOM05D004598 ORTHO05D005550 1.8e-08 63.2 52 53.8
MD10G1130700 Malus domestica HOM05D004598 ORTHO05D005550 1.8e-08 63.2 52 53.8
SGA_v2.0_scaffold108G30913 Striga asiatica HOM05D004598 ORTHO05D005550 1.8e-08 63.2 54 55.6
HanXRQChr14g0454151 Helianthus annuus HOM05D004598 ORTHO05D005550 2.3e-08 62.8 52 53.8
Lalb_Chr01g0007411 Lupinus albus HOM05D004598 ORTHO05D005550 2.3e-08 62.8 65 46.2
SHI44717 Sapria himalayana HOM05D004598 ORTHO05D005550 2.3e-08 62.8 38 81.6
BcaC03g13863 Brassica carinata HOM05D004598 ORTHO05D005550 3.1e-08 62.4 66 47.0
TPR.G6064 Trifolium pratense HOM05D004598 ORTHO05D005550 3.1e-08 62.4 52 55.8
CSS0038935 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 4.0e-08 62.0 69 46.4
CSS0039662 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 4.0e-08 62.0 69 46.4
MD05G1127200 Malus domestica HOM05D004598 ORTHO05D005550 4.0e-08 62.0 52 51.9
THA.LOC104799567 Tarenaya hassleriana HOM05D004598 ORTHO05D005550 4.0e-08 62.0 66 47.0
AT5G22130 Arabidopsis thaliana HOM05D004598 ORTHO05D005550 5.2e-08 61.6 52 57.7
BcaB05g22747 Brassica carinata HOM05D004598 ORTHO05D005550 5.2e-08 61.6 52 55.8
C02p10690 Brassica napus HOM05D004598 ORTHO05D005550 5.2e-08 61.6 52 55.8
BolC2t07140H Brassica oleracea HOM05D004598 ORTHO05D005550 5.2e-08 61.6 52 55.8
TPR.G8530 Trifolium pratense HOM05D004598 ORTHO05D005550 5.2e-08 61.6 52 53.8
vmacro01928 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 5.2e-08 61.6 60 51.7
Aa31LG1G13300 Aethionema arabicum HOM05D004598 ORTHO05D005550 6.8e-08 61.2 52 55.8
AL6G33110 Arabidopsis lyrata HOM05D004598 ORTHO05D005550 6.8e-08 61.2 52 57.7
BraA02t05641Z Brassica rapa HOM05D004598 ORTHO05D005550 6.8e-08 61.2 52 55.8
Thhalv10013575m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 6.8e-08 61.2 52 55.8
Solyc02g083260.3 Solanum lycopersicum HOM05D004598 ORTHO05D005550 6.8e-08 61.2 58 51.7
Sopen02g028050 Solanum pennellii HOM05D004598 ORTHO05D005550 6.8e-08 61.2 58 51.7
MSTRG.2598 Avicennia marina HOM05D004598 ORTHO05D005550 8.9e-08 60.8 80 45.0
CSS0010665 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 8.9e-08 60.8 69 44.9
FAN15G2177 Fragaria x ananassa HOM05D004598 ORTHO05D005550 8.9e-08 60.8 52 50.0
FAN27G3211 Fragaria x ananassa HOM05D004598 ORTHO05D005550 8.9e-08 60.8 52 50.0
Prupe.8G170900 Prunus persica HOM05D004598 ORTHO05D005550 8.9e-08 60.8 50 56.0
SalBow2G2153 Salvia bowleyana HOM05D004598 ORTHO05D005550 8.9e-08 60.8 62 48.4
SMO118G0414 Selaginella moellendorffii HOM05D004598 ORTHO05D005550 8.9e-08 60.8 109 29.4
Oeu046543.3 Olea europaea HOM05D004598 ORTHO05D005550 1.2e-07 60.5 62 46.8
RcHm_v2.0_Chr6g0279191 Rosa chinensis HOM05D004598 ORTHO05D005550 1.2e-07 60.5 52 50.0
SGA_v2.0_scaffold195G40853 Striga asiatica HOM05D004598 ORTHO05D003143 1.2e-07 60.5 52 55.8
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 1.5e-07 60.1 51 56.9
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 1.5e-07 60.1 51 56.9
Peaxi162Scf00300g00120 Petunia axillaris HOM05D004598 ORTHO05D005550 1.5e-07 60.1 51 56.9
SalBow6G7131 Salvia bowleyana HOM05D004598 ORTHO05D005550 1.5e-07 60.1 54 53.7
PGSC0003DMG400001580 Solanum tuberosum HOM05D004598 ORTHO05D005550 1.5e-07 60.1 51 56.9
vmacro20477 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 1.5e-07 60.1 48 56.2
vmacro22733 Vaccinium macrocarpon HOM05D004598 ORTHO05D005550 1.5e-07 60.1 48 56.2
CSS0036727 Camellia sinensis var. sinensis HOM05D004598 ORTHO05D005550 2.0e-07 59.7 75 41.3
CAN.G890.18 Capsicum annuum HOM05D004598 ORTHO05D005550 2.0e-07 59.7 51 56.9
CARHR191400 Cardamine hirsuta HOM05D004598 ORTHO05D005550 2.0e-07 59.7 60 50.0
Thhalv10015361m.g Eutrema salsugineum HOM05D004598 ORTHO05D005550 2.0e-07 59.7 49 55.1
PSO675G4488 Papaver somniferum HOM05D004598 ORTHO05D005550 2.6e-07 59.3 99 36.4
Aqoxy3G01523 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 3.4e-07 58.9 60 45.0
Aqoxy3G01530 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 3.4e-07 58.9 60 45.0
Aqoxy6G02901 Aquilegia oxysepala HOM05D004598 ORTHO05D005550 3.4e-07 58.9 60 45.0
Lj2A487T63 Lonicera japonica HOM05D004598 ORTHO05D005550 3.4e-07 58.9 52 53.8
FAN20G2148 Fragaria x ananassa HOM05D004598 ORTHO05D005550 5.8e-07 58.2 52 48.1
Mapoly0079s0001 Marchantia polymorpha HOM05D004598 ORTHO05D005550 5.8e-07 58.2 58 44.8
Sp6g23050 Schrenkiella parvula HOM05D004598 ORTHO05D005550 5.8e-07 58.2 52 51.9
Migut.H02299 Erythranthe guttata HOM05D004598 ORTHO05D005550 9.8e-07 57.4 53 50.9
ATR0165G018 Amborella trichopoda HOM05D004598 ORTHO05D005550 1.7e-06 56.6 61 39.3
Migut.H02295 Erythranthe guttata HOM05D004598 ORTHO05D005550 1.7e-06 56.6 52 51.9
Migut.H02297 Erythranthe guttata HOM05D004598 ORTHO05D005550 2.9e-06 55.8 53 49.1
Hma1.2p1_0315F.1_g122700 Hydrangea macrophylla HOM05D004598 ORTHO05D005550 3.7e-06 55.5 52 50.0
CBR_g41686 Chara braunii HOM05D004598 ORTHO05D005550 6.4e-06 54.7 51 49.0
Manes.07G140750 Manihot esculenta HOM05D004598 ORTHO05D005550 8.3e-06 54.3 47 55.3


User provided reference genes

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