Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI53794 Sapria himalayana HOM05D006554 ORTHO05D008778 4.3e-110 401.4 204 100.0
Manes.15G153200 Manihot esculenta HOM05D006554 ORTHO05D008778 3.0e-23 112.8 302 31.5
QL02p073734 Quercus lobata HOM05D006554 ORTHO05D008778 6.7e-23 111.7 243 31.7
Potri.003G101100 Populus trichocarpa HOM05D006554 ORTHO05D008778 2.8e-21 106.3 242 32.2
Cfa007322 Carpinus fangiana HOM05D006554 ORTHO05D008778 8.2e-21 104.8 262 29.8
FAN09G2431 Fragaria x ananassa HOM05D006554 ORTHO05D008778 8.2e-21 104.8 239 31.4
FvH4_6g52060 Fragaria vesca HOM05D006554 ORTHO05D008778 4.1e-20 102.4 240 32.5
RcHm_v2.0_Chr2g0173581 Rosa chinensis HOM05D006554 ORTHO05D008778 1.6e-19 100.5 251 29.5
Ciclev10015858m.g Citrus clementina HOM05D006554 ORTHO05D008778 3.5e-19 99.4 100 54.0
Haze_14775 Corylus avellana HOM05D006554 ORTHO05D008778 4.5e-19 99.0 262 29.4
Duzib147G0564 Durio zibethinus HOM05D006554 ORTHO05D008778 1.0e-18 97.8 250 30.4
Hma1.2p1_0279F.1_g111960 Hydrangea macrophylla HOM05D006554 ORTHO05D008778 1.3e-18 97.4 98 50.0
Dinv33413 Davidia involucrata HOM05D006554 ORTHO05D008778 1.7e-18 97.1 100 51.0
FAN02G3632 Fragaria x ananassa HOM05D006554 ORTHO05D008778 1.7e-18 97.1 239 30.1
Sabra03G0068900 Salix brachista HOM05D006554 ORTHO05D008778 3.8e-18 95.9 103 48.5
FAN14G0519 Fragaria x ananassa HOM05D006554 ORTHO05D008778 5.0e-18 95.5 257 31.5
FAN05G3817 Fragaria x ananassa HOM05D006554 ORTHO05D008778 1.5e-17 94.0 259 30.9
MSTRG.3126 Avicennia marina HOM05D006554 ORTHO05D008778 1.9e-17 93.6 126 40.5
Prupe.3G295900 Prunus persica HOM05D006554 ORTHO05D008778 2.5e-17 93.2 274 27.7
Migut.H00036 Erythranthe guttata HOM05D006554 ORTHO05D008778 7.2e-17 91.7 158 38.6
Phvul.008G147100 Phaseolus vulgaris HOM05D006554 ORTHO05D008778 9.4e-17 91.3 149 38.3
TPR.G1120 Trifolium pratense HOM05D006554 ORTHO05D008778 9.4e-17 91.3 254 29.9
FAN14G5462 Fragaria x ananassa HOM05D006554 ORTHO05D008778 6.1e-16 88.6 108 42.6
vmacro05891 Vaccinium macrocarpon HOM05D006554 ORTHO05D008778 6.1e-16 88.6 251 31.1
Actinidia05967 Actinidia chinensis HOM05D006554 ORTHO05D008778 1.0e-15 87.8 106 46.2
Thecc.04G022100 Theobroma cacao HOM05D006554 ORTHO05D008778 1.4e-15 87.4 102 48.0
MD09G1020300 Malus domestica HOM05D006554 ORTHO05D008778 1.8e-15 87.0 102 46.1
CSS0050446 Camellia sinensis var. sinensis HOM05D006554 ORTHO05D008778 2.3e-15 86.7 98 45.9
Glyma.19G079100 Glycine max HOM05D006554 ORTHO05D008778 3.0e-15 86.3 252 26.2
Gohir.A05G353700 Gossypium hirsutum HOM05D006554 ORTHO05D008778 3.0e-15 86.3 250 29.6
SalBow1G4569 Salvia bowleyana HOM05D006554 ORTHO05D008778 3.0e-15 86.3 230 28.7
CiPaw.04G030700 Carya illinoinensis HOM05D006554 ORTHO05D008778 4.0e-15 85.9 100 47.0
Gohir.D04G059400 Gossypium hirsutum HOM05D006554 ORTHO05D008778 6.7e-15 85.1 101 49.5
Gorai.012G066100 Gossypium raimondii HOM05D006554 ORTHO05D008778 6.7e-15 85.1 101 49.5
PGSC0003DMG400006964 Solanum tuberosum HOM05D006554 ORTHO05D008778 6.7e-15 85.1 111 44.1
Carub.0005s0577 Capsella rubella HOM05D006554 ORTHO05D008778 8.8e-15 84.7 163 31.9
AL5G16780 Arabidopsis lyrata HOM05D006554 ORTHO05D008778 1.2e-14 84.3 167 31.7
Cc07_g00120 Coffea canephora HOM05D006554 ORTHO05D008778 1.2e-14 84.3 246 28.0
Sopen02g017020 Solanum pennellii HOM05D006554 ORTHO05D008778 1.2e-14 84.3 106 45.3
Solyc02g067900.3 Solanum lycopersicum HOM05D006554 ORTHO05D008778 1.5e-14 84.0 106 45.3
Medtr7g032890 Medicago truncatula HOM05D006554 ORTHO05D008778 3.3e-14 82.8 103 44.7
Nitab4.5_0004496g0080 Nicotiana tabacum HOM05D006554 ORTHO05D008778 4.4e-14 82.4 97 47.4
TAR629G0722 Trochodendron aralioides HOM05D006554 ORTHO05D008778 4.4e-14 82.4 100 44.0
AT3G27420 Arabidopsis thaliana HOM05D006554 ORTHO05D008778 7.5e-14 81.6 163 31.3
arahy.Tifrunner.gnm1.ann1.1L0SFZ Arachis hypogaea HOM05D006554 ORTHO05D008778 7.5e-14 81.6 293 25.6
Glyma.16G067800 Glycine max HOM05D006554 ORTHO05D008778 1.3e-13 80.9 252 25.0
CANSAT64G1839 Cannabis sativa HOM05D006554 ORTHO05D008778 1.7e-13 80.5 286 28.3
RhsimUnG0087800 Rhododendron simsii HOM05D006554 ORTHO05D008778 1.7e-13 80.5 228 29.4
Nitab4.5_0000040g0640 Nicotiana tabacum HOM05D006554 ORTHO05D008778 2.2e-13 80.1 97 47.4
RhsimUnG0005800 Rhododendron simsii HOM05D006554 ORTHO05D008778 2.8e-13 79.7 228 29.4
Lalb_Chr22g0360641 Lupinus albus HOM05D006554 ORTHO05D008778 4.8e-13 79.0 99 43.4
CARHR148770 Cardamine hirsuta HOM05D006554 ORTHO05D008778 6.3e-13 78.6 215 27.0
Peaxi162Scf00080g01410 Petunia axillaris HOM05D006554 ORTHO05D008778 6.3e-13 78.6 122 41.8
GSVIVG01032362001 Vitis vinifera HOM05D006554 ORTHO05D008778 8.2e-13 78.2 100 46.0
Hund23035 Selenicereus undatus HOM05D006554 ORTHO05D008778 1.1e-12 77.8 100 45.0
SGA_v2.0_scaffold135G34926 Striga asiatica HOM05D006554 ORTHO05D008778 1.1e-12 77.8 102 43.1
Lsat_1_v5_gn_0_6020 Lactuca sativa HOM05D006554 ORTHO05D008778 2.4e-12 76.6 100 45.0
Thhalv10027933m.g Eutrema salsugineum HOM05D006554 ORTHO05D008778 4.1e-12 75.9 108 38.9
Nn4g22538 Nelumbo nucifera HOM05D006554 ORTHO05D008778 4.1e-12 75.9 207 30.9
AUR62028440 Chenopodium quinoa HOM05D006554 ORTHO05D008778 1.2e-11 74.3 252 27.0
Sp7g01270 Schrenkiella parvula HOM05D006554 ORTHO05D008778 2.0e-11 73.6 155 29.0
ClCG05G012880 Citrullus lanatus HOM05D006554 ORTHO05D008778 2.7e-11 73.2 98 37.8
ECA246G2886 Erigeron canadensis HOM05D006554 ORTHO05D008778 3.5e-11 72.8 99 41.4
Prupe.3G207500 Prunus persica HOM05D006554 ORTHO05D008778 3.5e-11 72.8 253 26.5
Sp2g16620 Schrenkiella parvula HOM05D006554 ORTHO05D008778 1.0e-10 71.2 166 31.3
Aqoxy5G03668 Aquilegia oxysepala HOM05D006554 ORTHO05D008778 1.3e-10 70.9 97 35.1
BraA02t08548Z Brassica rapa HOM05D006554 ORTHO05D017433 1.7e-10 70.5 212 27.8
A02p35470 Brassica napus HOM05D006554 ORTHO05D017433 2.2e-10 70.1 212 27.8
Sed0003688 Sechium edule HOM05D006554 ORTHO05D008778 2.9e-10 69.7 98 38.8
Ah.03g136830 Amaranthus hybridus HOM05D003292 ORTHO05D004237 3.8e-10 69.3 105 38.1
CsaV3_3G027590 Cucumis sativus L. HOM05D006554 ORTHO05D008778 3.8e-10 69.3 197 28.4
AT5G40600 Arabidopsis thaliana HOM05D006554 ORTHO05D008778 6.5e-10 68.6 206 26.7
Atru.chr6.2449 Acer truncatum HOM05D006554 ORTHO05D008778 1.5e-09 67.4 80 43.8
Thhalv10004828m.g Eutrema salsugineum HOM05D006554 ORTHO05D008778 1.5e-09 67.4 227 25.6
EL10Ac5g11640 Beta vulgaris HOM05D006554 ORTHO05D008778 1.9e-09 67.0 96 37.5
BcaC03g17463 Brassica carinata HOM05D006554 ORTHO05D017433 2.5e-09 66.6 216 26.4
unitig_52.g17657 Utricularia gibba HOM05D006554 ORTHO05D008778 2.5e-09 66.6 97 38.1
C02p54190 Brassica napus HOM05D006554 ORTHO05D008778 4.2e-09 65.9 214 25.7
AL7G49210 Arabidopsis lyrata HOM05D006554 ORTHO05D008778 5.5e-09 65.5 148 30.4
A04p13620 Brassica napus HOM05D004424 ORTHO05D005476 5.5e-09 65.5 156 28.2
BraA04t17023Z Brassica rapa HOM05D004424 ORTHO05D005476 5.5e-09 65.5 156 28.2
VMungo1383G1633 Vigna mungo HOM05D006554 ORTHO05D008778 5.5e-09 65.5 80 43.8
Carub.0007s3489 Capsella rubella HOM05D006554 ORTHO05D008778 7.2e-09 65.1 206 26.2
BolC4t26342H Brassica oleracea HOM05D006554 ORTHO05D008778 9.4e-09 64.7 154 27.3
PGR083G2647 Punica granatum HOM05D006554 ORTHO05D008778 1.2e-08 64.3 188 26.1
C04p47410 Brassica napus HOM05D004424 ORTHO05D005476 1.6e-08 63.9 153 27.5
MELO3C014791.2 Cucumis melo HOM05D006554 ORTHO05D008778 1.6e-08 63.9 98 35.7
BolC2t11482H Brassica oleracea HOM05D006554 ORTHO05D008778 2.7e-08 63.2 218 24.8
PSO675G3751 Papaver somniferum HOM05D006554 ORTHO05D008778 2.7e-08 63.2 99 36.4
Eucgr.J02264 Eucalyptus grandis HOM05D006554 ORTHO05D008778 3.6e-08 62.8 104 35.6
PSO541G1758 Papaver somniferum HOM05D006554 ORTHO05D008778 3.6e-08 62.8 99 36.4
CARHR261360 Cardamine hirsuta HOM05D006554 ORTHO05D008778 3.0e-07 59.7 191 26.2
Lj1g0005465 Lotus japonicus HOM05D006554 ORTHO05D008778 5.2e-07 58.9 97 38.1
Oeu050455.2 Olea europaea HOM05D006554 ORTHO05D008778 1.2e-06 57.8 154 30.5


User provided reference genes

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