Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI53748 Sapria himalayana HOM05D004911 ORTHO05D005930 2.0e-141 505.8 251 100.0
SHI50333 Sapria himalayana HOM05D004911 ORTHO05D005930 2.4e-102 375.9 206 92.2
SHI04173 Sapria himalayana HOM05D004911 ORTHO05D005930 6.6e-97 357.8 226 80.5
SHI39004 Sapria himalayana HOM05D004911 ORTHO05D005930 1.5e-85 320.1 201 84.1
SHI47273 Sapria himalayana HOM05D004911 ORTHO05D005930 7.6e-85 317.8 170 92.9
SHI42567 Sapria himalayana HOM05D004911 ORTHO05D005930 1.2e-82 310.5 201 81.6
SHI34911 Sapria himalayana HOM05D004911 ORTHO05D005930 6.2e-79 298.1 207 73.9
Sabra08G0063200 Salix brachista HOM05D004911 ORTHO05D005930 1.5e-56 223.8 234 49.6
Potri.008G085300 Populus trichocarpa HOM05D004911 ORTHO05D005930 3.3e-56 222.6 234 49.1
CiPaw.05G166500 Carya illinoinensis HOM05D004911 ORTHO05D005930 4.3e-56 222.2 221 51.6
SHI51106 Sapria himalayana HOM05D004911 ORTHO05D005930 2.2e-55 219.9 192 62.0
Manes.03G080800 Manihot esculenta HOM05D004911 ORTHO05D005930 6.9e-54 214.9 226 50.9
Haze_11729 Corylus avellana HOM05D004911 ORTHO05D005930 1.3e-52 210.7 240 47.9
Cfa008718 Carpinus fangiana HOM05D004911 ORTHO05D005930 2.9e-52 209.5 223 50.2
Cpa.g.sc63.15 Carica papaya HOM05D004911 ORTHO05D005930 3.8e-52 209.1 224 48.7
CsaV3_5G017560 Cucumis sativus L. HOM05D004911 ORTHO05D005930 1.9e-51 206.8 219 51.6
Aqoxy3G04281 Aquilegia oxysepala HOM05D004911 ORTHO05D005930 3.2e-51 206.1 217 53.5
MELO3C005202.2 Cucumis melo HOM05D004911 ORTHO05D005930 4.2e-51 205.7 221 51.1
TWI53G1120 Tripterygium wilfordii HOM05D004911 ORTHO05D005930 2.1e-50 203.4 209 49.3
ClCG01G007110 Citrullus lanatus HOM05D004911 ORTHO05D005930 4.7e-50 202.2 224 50.9
Duzib251G0593 Durio zibethinus HOM05D004911 ORTHO05D005930 4.7e-50 202.2 216 49.1
Gohir.A04G143200 Gossypium hirsutum HOM05D004911 ORTHO05D005930 5.1e-49 198.7 216 50.0
Gohir.D04G186500 Gossypium hirsutum HOM05D004911 ORTHO05D005930 8.8e-49 198.0 216 49.5
Gorai.012G182900 Gossypium raimondii HOM05D004911 ORTHO05D005930 1.1e-48 197.6 216 50.0
Sed0025480 Sechium edule HOM05D004911 ORTHO05D005930 1.5e-48 197.2 213 49.8
Atru.chr11.1224 Acer truncatum HOM05D004911 ORTHO05D005930 2.0e-48 196.8 219 48.9
Thecc.02G295700 Theobroma cacao HOM05D004911 ORTHO05D005930 4.4e-48 195.7 229 46.7
Actinidia04316 Actinidia chinensis HOM05D004911 ORTHO05D005930 9.7e-48 194.5 227 46.7
QL03p043434 Quercus lobata HOM05D004911 ORTHO05D005930 2.8e-47 193.0 236 45.3
Nn3g18681 Nelumbo nucifera HOM05D004911 ORTHO05D005930 4.8e-47 192.2 228 45.6
CDE05G0535 Ceratophyllum demersum HOM05D004911 ORTHO05D005930 8.2e-47 191.4 241 43.6
PSO063G3537 Papaver somniferum HOM05D004911 ORTHO05D005930 8.2e-47 191.4 224 46.9
TAR371G0490 Trochodendron aralioides HOM05D004911 ORTHO05D005930 1.4e-46 190.7 216 45.4
Ciclev10030563m.g Citrus clementina HOM05D004911 ORTHO05D005930 9.1e-46 188.0 216 47.2
CANSAT56G0121 Cannabis sativa HOM05D004911 ORTHO05D005930 3.5e-45 186.0 220 47.3
PSO782G1502 Papaver somniferum HOM05D004911 ORTHO05D005930 7.7e-45 184.9 226 46.5
FvH4_7g19060 Fragaria vesca HOM05D004911 ORTHO05D005930 1.0e-44 184.5 216 49.1
PGR044G1924 Punica granatum HOM05D004911 ORTHO05D005930 1.3e-44 184.1 217 47.9
CSS0020868 Camellia sinensis var. sinensis HOM05D004911 ORTHO05D005930 1.7e-44 183.7 242 42.1
FAN06G1517 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.7e-44 183.7 216 49.1
FAN06G4750 Fragaria x ananassa HOM05D004911 ORTHO05D005930 2.2e-44 183.3 216 49.1
RcHm_v2.0_Chr1g0362961 Rosa chinensis HOM05D004911 ORTHO05D005930 3.8e-44 182.6 216 49.1
FAN03G1024 Fragaria x ananassa HOM05D004911 ORTHO05D005930 5.0e-44 182.2 216 48.6
Lj3g0004396 Lotus japonicus HOM05D004911 ORTHO05D005930 5.0e-44 182.2 231 46.3
FAN01G1211 Fragaria x ananassa HOM05D004911 ORTHO05D005930 6.5e-44 181.8 216 48.6
FAN10G1537 Fragaria x ananassa HOM05D004911 ORTHO05D005930 6.5e-44 181.8 216 48.6
FAN10G0928 Fragaria x ananassa HOM05D004911 ORTHO05D005930 8.5e-44 181.4 216 48.6
MBI03_g33919_MAGBIO Magnolia biondii HOM05D004911 ORTHO05D005930 1.1e-43 181.0 253 41.1
Dinv12051 Davidia involucrata HOM05D004911 ORTHO05D005930 1.9e-43 180.3 235 44.3
SHI49274 Sapria himalayana HOM05D004911 ORTHO05D005930 4.2e-43 179.1 198 53.0
Sc06g0007820 Simmondsia chinensis HOM05D004911 ORTHO05D005930 4.2e-43 179.1 249 41.8
AUR62015197 Chenopodium quinoa HOM05D004911 ORTHO05D005930 1.2e-42 177.6 232 43.1
Rhsim09G0072200 Rhododendron simsii HOM05D004911 ORTHO05D005930 1.2e-42 177.6 208 45.2
TPR.G32325 Trifolium pratense HOM05D004911 ORTHO05D005930 6.1e-42 175.3 234 45.3
CARHR095390 Cardamine hirsuta HOM05D004911 ORTHO05D005930 8.0e-42 174.9 206 44.2
Medtr4g074460 Medicago truncatula HOM05D004911 ORTHO05D005930 1.4e-41 174.1 232 44.0
AT3G19870 Arabidopsis thaliana HOM05D004911 ORTHO05D005930 2.3e-41 173.3 206 44.2
Thhalv10019942m.g Eutrema salsugineum HOM05D004911 ORTHO05D005930 2.3e-41 173.3 208 45.2
Glyma.12G027900 Glycine max HOM05D004911 ORTHO05D005930 2.3e-41 173.3 232 44.0
EL10Ac9g22915 Beta vulgaris HOM05D004911 ORTHO05D005930 3.0e-41 172.9 236 40.3
GSVIVG01010210001 Vitis vinifera HOM05D004911 ORTHO05D005930 3.0e-41 172.9 224 41.5
Carub.0003s1976 Capsella rubella HOM05D004911 ORTHO05D005930 4.0e-41 172.6 206 44.2
MD01G1105900 Malus domestica HOM05D004911 ORTHO05D005930 6.7e-41 171.8 234 43.2
Sp3g17890 Schrenkiella parvula HOM05D004911 ORTHO05D005930 6.7e-41 171.8 226 42.5
vmacro16011 Vaccinium macrocarpon HOM05D004911 ORTHO05D005930 6.7e-41 171.8 201 44.8
Lj3C852G13 Lonicera japonica HOM05D004911 ORTHO05D005930 8.8e-41 171.4 224 42.4
Ca_25607_v3 Cicer arietinum L. HOM05D004911 ORTHO05D005930 1.1e-40 171.0 235 45.1
AL3G33410 Arabidopsis lyrata HOM05D004911 ORTHO05D005930 1.5e-40 170.6 205 43.9
Ah.01g001680 Amaranthus hybridus HOM05D004911 ORTHO05D005930 2.0e-40 170.2 238 41.2
MD07G1172300 Malus domestica HOM05D004911 ORTHO05D005930 2.0e-40 170.2 216 44.9
THA.LOC104809147 Tarenaya hassleriana HOM05D004911 ORTHO05D005930 4.4e-40 169.1 224 42.4
Glyma.11G102800 Glycine max HOM05D004911 ORTHO05D005930 7.5e-40 168.3 232 42.2
Hund08529 Selenicereus undatus HOM05D004911 ORTHO05D005930 7.5e-40 168.3 233 41.6
Lalb_Chr19g0139351 Lupinus albus HOM05D004911 ORTHO05D005930 9.7e-40 167.9 223 44.8
Psat7g173880 Pisum sativum HOM05D004911 ORTHO05D005930 9.7e-40 167.9 229 45.0
VMungo1215G1051 Vigna mungo HOM05D004911 ORTHO05D005930 3.7e-39 166.0 231 40.7
Prupe.2G211300 Prunus persica HOM05D004911 ORTHO05D005930 4.8e-39 165.6 219 44.7
arahy.Tifrunner.gnm1.ann1.Q7DFN3 Arachis hypogaea HOM05D004911 ORTHO05D005930 8.2e-39 164.9 202 47.0
Aa31LG8G6640 Aethionema arabicum HOM05D004911 ORTHO05D005930 1.4e-38 164.1 206 42.7
Hma1.2p1_0183F.1_g081050 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 5.3e-38 162.2 244 42.2
COL.COLO4_16624 Corchorus olitorius HOM05D004911 ORTHO05D005930 2.7e-37 159.8 178 49.4
BcaC09g48939 Brassica carinata HOM05D004911 ORTHO05D005930 3.5e-37 159.5 206 42.2
C01p44300 Brassica napus HOM05D004911 ORTHO05D005930 3.5e-37 159.5 206 42.2
BolC1t04393H Brassica oleracea HOM05D004911 ORTHO05D005930 3.5e-37 159.5 206 42.2
BraA01t03570Z Brassica rapa HOM05D004911 ORTHO05D005930 7.7e-37 158.3 206 42.2
ATR0564G294 Amborella trichopoda HOM05D004911 ORTHO05D005930 1.0e-36 157.9 246 38.6
A01p34870 Brassica napus HOM05D004911 ORTHO05D005930 1.3e-36 157.5 206 42.2
SMO367G0101 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 4.4e-32 142.5 225 38.7
Solyc10g079850.2 Solanum lycopersicum HOM05D004911 ORTHO05D005930 4.4e-32 142.5 233 37.8
Sopen10g030460 Solanum pennellii HOM05D004911 ORTHO05D005930 2.2e-31 140.2 233 37.3
Lsat_1_v5_gn_0_9321 Lactuca sativa HOM05D004911 ORTHO05D005930 8.3e-31 138.3 224 37.1
SHI45396 Sapria himalayana HOM05D004911 ORTHO05D005930 8.3e-31 138.3 255 39.2
SHI45717 Sapria himalayana HOM05D004911 ORTHO05D005930 8.3e-31 138.3 255 39.2
PGSC0003DMG400029831 Solanum tuberosum HOM05D004911 ORTHO05D005930 1.1e-30 137.9 233 36.9
Pp3c23_5970 Physcomitrium patens HOM05D004911 ORTHO05D005930 7.0e-30 135.2 252 36.1
Nitab4.5_0000677g0060 Nicotiana tabacum HOM05D004911 ORTHO05D005930 9.1e-30 134.8 237 36.3
DCAR_023433 Daucus carota HOM05D004911 ORTHO05D005930 1.2e-29 134.4 142 47.9
Nitab4.5_0000562g0030 Nicotiana tabacum HOM05D004911 ORTHO05D005930 2.0e-29 133.7 237 35.9
Migut.H02310 Erythranthe guttata HOM05D004911 ORTHO05D005930 1.7e-28 130.6 219 38.4
SGA_v2.0_scaffold80G25956 Striga asiatica HOM05D004911 ORTHO05D005930 2.9e-28 129.8 217 37.8
SalBow2G3529 Salvia bowleyana HOM05D004911 ORTHO05D005930 3.8e-28 129.4 215 38.1
MSTRG.8077 Avicennia marina HOM05D004911 ORTHO05D005930 6.5e-28 128.6 217 39.6
AagrBONN_evm.TU.Sc2ySwM_228.3553 Anthoceros agrestis HOM05D004911 ORTHO05D005930 7.2e-27 125.2 229 35.4
SHI53022 Sapria himalayana HOM05D004911 ORTHO05D005930 7.2e-27 125.2 68 95.6
Mapoly0023s0169 Marchantia polymorpha HOM05D004911 ORTHO05D005930 9.4e-27 124.8 232 35.3
Peaxi162Scf01315g00114 Petunia axillaris HOM05D004911 ORTHO05D005930 9.4e-27 124.8 210 37.1
unitig_22.g6363 Utricularia gibba HOM05D004911 ORTHO05D005930 1.2e-26 124.4 212 35.8
HanXRQChr06g0175521 Helianthus annuus HOM05D004911 ORTHO05D005930 1.2e-24 117.9 224 34.4
CAN.G1656.8 Capsicum annuum HOM05D004911 ORTHO05D005930 7.5e-24 115.2 182 36.8
ECA246G1490 Erigeron canadensis HOM05D004911 ORTHO05D005930 1.3e-23 114.4 179 36.3
Cc07_g19490 Coffea canephora HOM05D004911 ORTHO05D005930 2.3e-17 93.6 218 31.7
CBR_g20270 Chara braunii HOM05D004911 ORTHO05D005930 2.7e-13 80.1 129 33.3
SHI38853 Sapria himalayana HOM05D004911 ORTHO05D005930 5.0e-12 75.9 53 73.6
Os02g0829400 Oryza sativa ssp. japonica HOM05D004911 ORTHO05D005930 1.2e-10 71.2 217 27.6


User provided reference genes

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