Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI53422 Sapria himalayana HOM05D000219 ORTHO05D367697 6.5e-47 190.3 89 100.0
SHI53431 Sapria himalayana HOM05D000219 ORTHO05D366913 6.5e-47 190.3 89 100.0
SHI53039 Sapria himalayana HOM05D000219 ORTHO05D368436 7.2e-46 186.8 89 98.9
SHI51482 Sapria himalayana HOM05D000219 ORTHO05D370418 7.4e-43 176.8 91 92.3
SHI48873 Sapria himalayana HOM05D000219 ORTHO05D365863 1.8e-41 172.2 85 96.5
SHI50359 Sapria himalayana HOM05D000219 ORTHO05D010276 9.1e-41 169.9 85 95.3
SHI39844 Sapria himalayana HOM05D000219 ORTHO05D010276 2.0e-40 168.7 85 91.8
SHI51309 Sapria himalayana HOM05D000219 ORTHO05D365638 5.9e-40 167.2 99 80.8
SHI51293 Sapria himalayana HOM05D000219 ORTHO05D010276 6.5e-39 163.7 96 82.3
SHI50564 Sapria himalayana HOM05D000219 ORTHO05D010276 1.1e-38 162.9 96 81.2
SHI50990 Sapria himalayana HOM05D000219 ORTHO05D010276 1.1e-38 162.9 96 81.2
SHI50457 Sapria himalayana HOM05D000219 ORTHO05D010276 1.4e-38 162.5 95 82.1
SHI49809 Sapria himalayana HOM05D000219 ORTHO05D010276 2.5e-38 161.8 96 80.2
SHI50254 Sapria himalayana HOM05D000219 ORTHO05D010276 2.5e-38 161.8 96 80.2
SHI50538 Sapria himalayana HOM05D000219 ORTHO05D010276 9.4e-38 159.8 87 87.4
SHI50011 Sapria himalayana HOM05D000219 ORTHO05D010276 6.1e-37 157.1 88 86.4
SHI36796 Sapria himalayana HOM05D000219 ORTHO05D010276 8.8e-36 153.3 85 85.9
SHI50751 Sapria himalayana HOM05D000219 ORTHO05D010276 5.7e-35 150.6 84 84.5
SHI52092 Sapria himalayana HOM05D000219 ORTHO05D010276 1.3e-34 149.4 84 84.5
SHI50092 Sapria himalayana HOM05D000219 ORTHO05D010276 2.6e-32 141.7 88 79.5
SHI44937 Sapria himalayana HOM05D000219 ORTHO05D010276 2.5e-30 135.2 84 78.6
SHI51510 Sapria himalayana HOM05D000219 ORTHO05D370682 9.4e-30 133.3 73 83.6
SHI52107 Sapria himalayana HOM05D000219 ORTHO05D010276 1.2e-29 132.9 85 77.6
SHI51431 Sapria himalayana HOM05D000219 ORTHO05D010276 1.4e-28 129.4 75 85.3
SHI50432 Sapria himalayana HOM05D000219 ORTHO05D010276 2.0e-27 125.6 84 75.0
SHI46225 Sapria himalayana HOM05D000219 ORTHO05D369840 4.5e-24 114.4 89 65.2
SHI45727 Sapria himalayana HOM05D000219 ORTHO05D010276 1.4e-20 102.8 65 78.5
SHI48911 Sapria himalayana HOM05D000219 ORTHO05D368533 6.3e-18 94.0 51 84.3
SHI49308 Sapria himalayana HOM05D000219 ORTHO05D365202 6.3e-18 94.0 51 84.3
SHI47290 Sapria himalayana HOM05D000219 ORTHO05D364870 8.3e-18 93.6 51 82.4
Potri.004G067000 Populus trichocarpa HOM05D000219 ORTHO05D000226 1.8e-17 92.4 165 33.9
Haze_18406 Corylus avellana HOM05D000219 ORTHO05D000226 7.0e-17 90.5 165 33.9
Sabra04G0044900 Salix brachista HOM05D000219 ORTHO05D000226 9.1e-17 90.1 165 33.3
SHI51978 Sapria himalayana HOM05D000219 ORTHO05D010276 9.1e-17 90.1 44 90.9
SHI53988 Sapria himalayana HOM05D000219 ORTHO05D365004 9.1e-17 90.1 84 58.3
PSO063G5970 Papaver somniferum HOM05D000219 ORTHO05D000226 1.2e-16 89.7 165 32.7
SHI49218 Sapria himalayana HOM05D000219 ORTHO05D370447 1.6e-16 89.4 51 78.4
PSO782G1609 Papaver somniferum HOM05D000219 ORTHO05D000226 2.7e-16 88.6 165 32.7
SHI53731 Sapria himalayana HOM05D000219 ORTHO05D010276 2.7e-16 88.6 45 86.7
TAR636G0341 Trochodendron aralioides HOM05D000219 ORTHO05D000226 3.5e-16 88.2 165 33.3
DCAR_023241 Daucus carota HOM05D000219 ORTHO05D000226 4.5e-16 87.8 154 33.1
Nitab4.5_0010398g0010 Nicotiana tabacum HOM05D000219 ORTHO05D000226 4.5e-16 87.8 165 32.7
QL08p055124 Quercus lobata HOM05D000219 ORTHO05D000226 4.5e-16 87.8 165 32.7
Nitab4.5_0000477g0170 Nicotiana tabacum HOM05D000219 ORTHO05D000226 5.9e-16 87.4 165 32.7
CANSAT35G1028 Cannabis sativa HOM05D000219 ORTHO05D000226 7.7e-16 87.0 165 32.1
CiPaw.15G107700 Carya illinoinensis HOM05D000219 ORTHO05D000226 7.7e-16 87.0 165 32.7
Cc00_g07970 Coffea canephora HOM05D000219 ORTHO05D000226 1.0e-15 86.7 165 32.1
Nn3g18548 Nelumbo nucifera HOM05D000219 ORTHO05D000226 1.0e-15 86.7 165 32.1
Atru.chr9.15 Acer truncatum HOM05D000219 ORTHO05D000226 1.3e-15 86.3 165 31.5
Ciclev10020629m.g Citrus clementina HOM05D000219 ORTHO05D000226 1.3e-15 86.3 165 32.1
MELO3C002189.2 Cucumis melo HOM05D000219 ORTHO05D000226 1.3e-15 86.3 154 33.1
Eucgr.K02331 Eucalyptus grandis HOM05D000219 ORTHO05D000226 1.3e-15 86.3 166 32.5
Manes.02G226001 Manihot esculenta HOM05D000219 ORTHO05D000226 1.3e-15 86.3 165 32.1
CAN.G65.64 Capsicum annuum HOM05D000219 ORTHO05D000226 1.7e-15 85.9 165 31.5
Peaxi162Scf00643g00536 Petunia axillaris HOM05D000219 ORTHO05D000226 1.7e-15 85.9 165 31.5
Rhsim12G0137400 Rhododendron simsii HOM05D000219 ORTHO05D000226 1.7e-15 85.9 165 30.9
Oeu062062.1 Olea europaea HOM05D000219 ORTHO05D000226 2.9e-15 85.1 165 30.3
SHI50826 Sapria himalayana HOM05D000219 ORTHO05D010276 2.9e-15 85.1 41 92.7
Phvul.004G136700 Phaseolus vulgaris HOM05D000219 ORTHO05D000226 3.8e-15 84.7 165 32.1
VMungo0464G1361 Vigna mungo HOM05D000219 ORTHO05D000226 3.8e-15 84.7 165 32.1
Dinv03509 Davidia involucrata HOM05D000219 ORTHO05D000226 5.0e-15 84.3 165 30.9
Lj5A168T98 Lonicera japonica HOM05D000219 ORTHO05D000226 5.0e-15 84.3 165 31.5
Prupe.5G245200 Prunus persica HOM05D000219 ORTHO05D000226 5.0e-15 84.3 165 29.7
vmacro16403 Vaccinium macrocarpon HOM05D000219 ORTHO05D000226 5.0e-15 84.3 165 30.9
A02p40120 Brassica napus HOM05D000219 ORTHO05D009306 6.6e-15 84.0 165 31.5
Carub.0006s2261 Capsella rubella HOM05D000219 ORTHO05D000226 6.6e-15 84.0 165 31.5
Gohir.D08G245900 Gossypium hirsutum HOM05D000219 ORTHO05D000226 6.6e-15 84.0 165 30.9
Gorai.004G262400 Gossypium raimondii HOM05D000219 ORTHO05D000226 6.6e-15 84.0 165 30.9
GSVIVG01024246001 Vitis vinifera HOM05D000219 ORTHO05D000226 6.6e-15 84.0 165 30.9
Aa31LG11G3990 Aethionema arabicum HOM05D000219 ORTHO05D000226 8.6e-15 83.6 165 30.9
Ah.14g085840 Amaranthus hybridus HOM05D005380 ORTHO05D006601 8.6e-15 83.6 163 31.3
BraA02t08978Z Brassica rapa HOM05D000219 ORTHO05D000226 8.6e-15 83.6 166 31.3
Glyma.09G161600 Glycine max HOM05D000219 ORTHO05D000226 8.6e-15 83.6 165 31.5
HanXRQChr12g0381231 Helianthus annuus HOM05D000219 ORTHO05D000226 8.6e-15 83.6 165 29.1
Hma1.2p1_0816F.1_g223010 Hydrangea macrophylla HOM05D000219 ORTHO05D000226 8.6e-15 83.6 164 31.7
SHI50752 Sapria himalayana HOM05D000219 ORTHO05D010276 8.6e-15 83.6 41 90.2
AL6G36350 Arabidopsis lyrata HOM05D000219 ORTHO05D000226 1.1e-14 83.2 165 31.5
Sp2g22670 Schrenkiella parvula HOM05D000219 ORTHO05D000226 1.1e-14 83.2 165 31.5
AT5G24760 Arabidopsis thaliana HOM05D000219 ORTHO05D000226 1.5e-14 82.8 165 31.5
PGR044G1542 Punica granatum HOM05D000219 ORTHO05D000226 1.5e-14 82.8 165 31.5
Sed0015203 Sechium edule HOM05D000219 ORTHO05D000226 1.5e-14 82.8 165 31.5
BcaB07g29921 Brassica carinata HOM05D000219 ORTHO05D000226 1.9e-14 82.4 165 30.9
CSS0027431 Camellia sinensis var. sinensis HOM05D000219 ORTHO05D000226 1.9e-14 82.4 149 30.9
Cpa.g.sc168.2 Carica papaya HOM05D000219 ORTHO05D000226 1.9e-14 82.4 165 32.1
Lalb_Chr22g0354051 Lupinus albus HOM05D000219 ORTHO05D000226 1.9e-14 82.4 165 30.9
BcaB07g29920 Brassica carinata HOM05D000219 ORTHO05D000226 2.5e-14 82.0 166 30.7
BcaC03g17949 Brassica carinata HOM05D000219 ORTHO05D009306 2.5e-14 82.0 166 30.7
C02p60090 Brassica napus HOM05D000219 ORTHO05D009306 2.5e-14 82.0 166 30.7
BolC2t12063H Brassica oleracea HOM05D000219 ORTHO05D000226 2.5e-14 82.0 166 30.7
CARHR188730 Cardamine hirsuta HOM05D000219 ORTHO05D000226 2.5e-14 82.0 165 31.5
Ca_25280_v3 Cicer arietinum L. HOM05D000219 ORTHO05D000226 2.5e-14 82.0 165 30.9
CsaV3_1G007740 Cucumis sativus L. HOM05D000219 ORTHO05D000226 2.5e-14 82.0 165 30.9
Sopen06g028460 Solanum pennellii HOM05D000219 ORTHO05D000226 2.5e-14 82.0 165 30.3
Duzib128G1276 Durio zibethinus HOM05D000219 ORTHO05D000226 3.3e-14 81.6 165 30.3
Solyc06g072160.3 Solanum lycopersicum HOM05D000219 ORTHO05D000226 3.3e-14 81.6 165 29.7
TPR.G31358 Trifolium pratense HOM05D000219 ORTHO05D000226 3.3e-14 81.6 165 30.3
ATR0124G003 Amborella trichopoda HOM05D000219 ORTHO05D000226 4.2e-14 81.3 165 30.3
Migut.O00280 Erythranthe guttata HOM05D000219 ORTHO05D000226 4.2e-14 81.3 165 29.7
Lj2g0026377 Lotus japonicus HOM05D000219 ORTHO05D000226 4.2e-14 81.3 165 30.9
Sc10g0006240 Simmondsia chinensis HOM05D000219 ORTHO05D000226 4.2e-14 81.3 165 29.7
FvH4_5g18580 Fragaria vesca HOM05D000219 ORTHO05D000226 5.5e-14 80.9 165 29.1
MBI03_g13437_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D000226 9.5e-14 80.1 165 28.5
RcHm_v2.0_Chr7g0176931 Rosa chinensis HOM05D000219 ORTHO05D000226 9.5e-14 80.1 165 28.5
Thecc.05G196900 Theobroma cacao HOM05D000219 ORTHO05D000226 9.5e-14 80.1 165 29.7
MD06G1241000 Malus domestica HOM05D000219 ORTHO05D000226 1.2e-13 79.7 163 28.2
SHI47776 Sapria himalayana HOM05D000219 ORTHO05D010276 1.2e-13 79.7 40 90.0
THA.LOC104798999 Tarenaya hassleriana HOM05D000219 ORTHO05D000226 1.2e-13 79.7 166 31.9
TWI36G1688 Tripterygium wilfordii HOM05D000219 ORTHO05D000226 1.2e-13 79.7 165 29.7
AUR62038562 Chenopodium quinoa HOM05D000219 ORTHO05D000226 1.6e-13 79.3 165 30.3
ECA233G3819 Erigeron canadensis HOM05D000219 ORTHO05D000226 1.6e-13 79.3 165 27.9
EL10Ac8g19435 Beta vulgaris HOM05D000219 ORTHO05D000226 2.1e-13 79.0 165 30.3
Medtr6g068930 Medicago truncatula HOM05D000219 ORTHO05D000226 2.1e-13 79.0 165 29.7
Os02g0637700 Oryza sativa ssp. japonica HOM05D000219 ORTHO05D000226 2.8e-13 78.6 165 28.5
Lsat_1_v5_gn_5_65400 Lactuca sativa HOM05D000219 ORTHO05D000226 3.6e-13 78.2 165 28.5
Hund22362 Selenicereus undatus HOM05D000219 ORTHO05D000226 3.6e-13 78.2 165 28.5
Thhalv10004400m.g Eutrema salsugineum HOM05D000219 ORTHO05D000226 4.7e-13 77.8 165 30.9
FAN04G1983 Fragaria x ananassa HOM05D000219 ORTHO05D000226 4.7e-13 77.8 174 27.6
TPR.G26646 Trifolium pratense HOM05D000219 ORTHO05D000226 4.7e-13 77.8 165 29.1
FAN08G0809 Fragaria x ananassa HOM05D000219 ORTHO05D000226 6.1e-13 77.4 174 27.6
FAN18G2659 Fragaria x ananassa HOM05D000219 ORTHO05D000226 6.1e-13 77.4 174 27.6
Zm00001eb185610 Zea mays HOM05D000219 ORTHO05D000226 6.1e-13 77.4 171 28.1
SalBow5G1826 Salvia bowleyana HOM05D000219 ORTHO05D000226 1.0e-12 76.6 165 29.1
ClCG01G014590 Citrullus lanatus HOM05D000219 ORTHO05D000226 1.4e-12 76.3 172 28.5
HPP92_015003 Vanilla planifolia HOM05D000219 ORTHO05D000226 3.0e-12 75.1 165 29.1
Eucgr.K02333 Eucalyptus grandis HOM05D000219 ORTHO05D000226 4.0e-12 74.7 165 28.5
MBI03_g44526_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D000226 1.5e-11 72.8 178 25.8
arahy.Tifrunner.gnm1.ann1.B2MH1M Arachis hypogaea HOM05D000219 ORTHO05D000226 3.4e-11 71.6 197 25.9
arahy.Tifrunner.gnm1.ann1.P0W1U8 Arachis hypogaea HOM05D000219 ORTHO05D000226 3.4e-11 71.6 197 25.9
COL.COLO4_05180 Corchorus olitorius HOM05D000219 ORTHO05D000226 7.5e-11 70.5 158 29.1
Aqoxy1G01067 Aquilegia oxysepala HOM05D000219 ORTHO05D000226 1.1e-09 66.6 45 57.8
Hma1.2p1_0816F.1_g223020 Hydrangea macrophylla HOM05D000219 ORTHO05D000226 1.8e-09 65.9 45 60.0
MD14G1246800 Malus domestica HOM05D000219 ORTHO05D000226 3.1e-09 65.1 104 33.7
SGA_v2.0_scaffold90G27735 Striga asiatica HOM05D000219 ORTHO05D000226 3.1e-09 65.1 201 23.9
CDE06G1999 Ceratophyllum demersum HOM05D000219 ORTHO05D000226 1.2e-08 63.2 127 29.1
TPR.G26649 Trifolium pratense HOM05D000219 ORTHO05D010276 1.6e-08 62.8 45 55.6
Actinidia25675 Actinidia chinensis HOM05D000219 ORTHO05D010276 2.7e-08 62.0 41 61.0
arahy.Tifrunner.gnm1.ann1.W4Q01Q Arachis hypogaea HOM05D000219 ORTHO05D010276 3.9e-07 58.2 59 47.5
Prupe.6G022900 Prunus persica HOM05D000219 ORTHO05D000226 5.0e-07 57.8 42 57.1
arahy.Tifrunner.gnm1.ann1.DB7K0S Arachis hypogaea HOM05D000219 ORTHO05D010276 6.6e-07 57.4 54 50.0
SEGI_10346 Sequoiadendron giganteum HOM05D000219 ORTHO05D000226 6.6e-07 57.4 116 28.4
Actinidia35153 Actinidia chinensis HOM05D000219 ORTHO05D000226 1.9e-06 55.8 42 57.1
Gohir.A08G225500 Gossypium hirsutum HOM05D000219 ORTHO05D000226 2.5e-06 55.5 42 57.1
FvH4_5g10650 Fragaria vesca HOM05D000219 ORTHO05D000226 3.3e-06 55.1 111 30.6
Actinidia03447 Actinidia chinensis HOM05D000219 ORTHO05D000226 5.6e-06 54.3 113 25.7
Pp3c13_21450 Physcomitrium patens HOM05D000219 ORTHO05D000226 5.6e-06 54.3 43 53.5
SEGI_32341 Sequoiadendron giganteum HOM05D000219 ORTHO05D000226 5.6e-06 54.3 41 58.5
Psat1g018280 Pisum sativum HOM05D000219 ORTHO05D000226 9.5e-06 53.5 42 57.1


User provided reference genes

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